RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 RMDN3Q96TC7 470 aa12.71□□□□□ -0.37
RAB5C-208ENST00000551338 TYW1Q9NV66 732 aaKnown RBP12.71□□□□□ -0.37
RAB5C-208ENST00000551338 TMOD4Q9NZQ9 345 aa12.71□□□□□ -0.37
RAB5C-208ENST00000551338 RNF181Q9P0P0 153 aa12.71□□□□□ -0.37
RAB5C-208ENST00000551338 ODF2LQ9ULJ1 636 aa12.71□□□□□ -0.37
RAB5C-208ENST00000551338 ARHGEF35A5YM69 484 aa12.7□□□□□ -0.38
RAB5C-208ENST00000551338 SFI1A8K8P3 1242 aa12.7□□□□□ -0.38
RAB5C-208ENST00000551338 CETN3O15182 167 aa12.7□□□□□ -0.38
RAB5C-208ENST00000551338 CALUO43852 315 aaPredicted RBP12.7□□□□□ -0.38
RAB5C-208ENST00000551338 NDUFA10O95299 355 aa12.7□□□□□ -0.38
RAB5C-208ENST00000551338 LYPLA2O95372 231 aa12.7□□□□□ -0.38
RAB5C-208ENST00000551338 SLU7O95391 586 aaKnown RBP12.7□□□□□ -0.38
RAB5C-208ENST00000551338 GCNT3O95395 438 aa12.7□□□□□ -0.38
RAB5C-208ENST00000551338 YBX3P16989 372 aaKnown RBP eCLIP12.7□□□□□ -0.382e-8■■■■□ 24.2
RAB5C-208ENST00000551338 ERCC3P19447 782 aa12.7□□□□□ -0.38
RAB5C-208ENST00000551338 NR2F2P24468 414 aa12.7□□□□□ -0.38
RAB5C-208ENST00000551338 GUCY2CP25092 1073 aa12.7□□□□□ -0.38
RAB5C-208ENST00000551338 NMT1P30419 496 aaKnown RBP12.7□□□□□ -0.38
RAB5C-208ENST00000551338 GNG11P61952 73 aa12.7□□□□□ -0.38
RAB5C-208ENST00000551338 HERVK_113P62684 666 aa12.7□□□□□ -0.38
RAB5C-208ENST00000551338 MAP3K9P80192 1104 aa12.7□□□□□ -0.38
RAB5C-208ENST00000551338 RBM10P98175 930 aaKnown RBP12.7□□□□□ -0.38
RAB5C-208ENST00000551338 NCBP1Q09161 790 aaKnown RBP12.7□□□□□ -0.38
RAB5C-208ENST00000551338 VGLL4Q14135 290 aa12.7□□□□□ -0.38
RAB5C-208ENST00000551338 ARHGEF16Q5VV41 709 aa12.7□□□□□ -0.38
RAB5C-208ENST00000551338 XRRA1Q6P2D8 792 aa12.7□□□□□ -0.38
RAB5C-208ENST00000551338 CCDC155Q8N6L0 562 aa12.7□□□□□ -0.38
RAB5C-208ENST00000551338 SMCR8Q8TEV9 937 aaPredicted RBP12.7□□□□□ -0.38
RAB5C-208ENST00000551338 ANKRD7Q92527 254 aa12.7□□□□□ -0.38
RAB5C-208ENST00000551338 TBC1D22BQ9NU19 505 aa12.7□□□□□ -0.38
RAB5C-208ENST00000551338 KCND2Q9NZV8 630 aa12.7□□□□□ -0.38
RAB5C-208ENST00000551338 SEL1LQ9UBV2 794 aa12.7□□□□□ -0.38
RAB5C-208ENST00000551338 ZNF215Q9UL58 517 aaPredicted RBP12.7□□□□□ -0.38
RAB5C-208ENST00000551338 EPN1Q9Y6I3 576 aaPredicted RBP12.7□□□□□ -0.38
RAB5C-208ENST00000551338 MYH10P35580 1976 aa12.7□□□□□ -0.38
RAB5C-208ENST00000551338 MCM3APO60318 1980 aa12.69□□□□□ -0.38
RAB5C-208ENST00000551338 TGFB1I1O43294 461 aa12.69□□□□□ -0.38
RAB5C-208ENST00000551338 ATP9AO75110 1047 aa12.69□□□□□ -0.38
RAB5C-208ENST00000551338 HIP1RO75146 1068 aa12.69□□□□□ -0.38
RAB5C-208ENST00000551338 P4HBP07237 508 aaKnown RBP12.69□□□□□ -0.38
RAB5C-208ENST00000551338 CCND2P30279 289 aa12.69□□□□□ -0.38
RAB5C-208ENST00000551338 HNRNPH3P31942 346 aaKnown RBP12.69□□□□□ -0.38
RAB5C-208ENST00000551338 CDK17Q00537 523 aa12.69□□□□□ -0.38
RAB5C-208ENST00000551338 ADAM9Q13443 819 aa12.69□□□□□ -0.38
RAB5C-208ENST00000551338 NAA30Q147X3 362 aaPredicted RBP12.69□□□□□ -0.38
RAB5C-208ENST00000551338 UGCGQ16739 394 aa12.69□□□□□ -0.38
RAB5C-208ENST00000551338 PDXDC1Q6P996 788 aa12.69□□□□□ -0.38
RAB5C-208ENST00000551338 DAW1Q8N136 415 aa12.69□□□□□ -0.38
RAB5C-208ENST00000551338 MYCT1Q8N699 235 aa12.69□□□□□ -0.38
RAB5C-208ENST00000551338 LRRN4CLQ8ND94 238 aa12.69□□□□□ -0.38
RAB5C-208ENST00000551338 BAP1Q92560 729 aa12.69□□□□□ -0.38
RAB5C-208ENST00000551338 GPRASP2Q96D09 838 aa12.69□□□□□ -0.38
RAB5C-208ENST00000551338 ERO1AQ96HE7 468 aa12.69□□□□□ -0.38
RAB5C-208ENST00000551338 TEX13BQ9BXU2 312 aa12.69□□□□□ -0.38
RAB5C-208ENST00000551338 IRX2Q9BZI1 471 aaPredicted RBP12.69□□□□□ -0.38
RAB5C-208ENST00000551338 ZSWIM4Q9H7M6 989 aa12.69□□□□□ -0.38
RAB5C-208ENST00000551338 ACAD9Q9H845 621 aa12.69□□□□□ -0.38
RAB5C-208ENST00000551338 PARVGQ9HBI0 331 aa12.69□□□□□ -0.38
RAB5C-208ENST00000551338 LZTFL1Q9NQ48 299 aa12.69□□□□□ -0.38
RAB5C-208ENST00000551338 DBR1Q9UK59 544 aaKnown RBP12.69□□□□□ -0.38
RAB5C-208ENST00000551338 FAM184BQ9ULE4 1060 aa12.69□□□□□ -0.38
RAB5C-208ENST00000551338 PLXNA1Q9UIW2 1896 aa12.68□□□□□ -0.38
RAB5C-208ENST00000551338 TESPA1A2RU30 521 aaPredicted RBP12.68□□□□□ -0.38
RAB5C-208ENST00000551338 PPP1R37O75864 691 aa12.68□□□□□ -0.38
RAB5C-208ENST00000551338 CCNE2O96020 404 aa12.68□□□□□ -0.38
RAB5C-208ENST00000551338 ABL1P00519 1130 aa12.68□□□□□ -0.38
RAB5C-208ENST00000551338 NR3C1P04150 777 aa12.68□□□□□ -0.38
RAB5C-208ENST00000551338 NR3C2P08235 984 aa12.68□□□□□ -0.38
RAB5C-208ENST00000551338 CASQ1P31415 396 aa12.68□□□□□ -0.38
RAB5C-208ENST00000551338 CYLC1P35663 651 aaPredicted RBP12.68□□□□□ -0.38
RAB5C-208ENST00000551338 JAK3P52333 1124 aa12.68□□□□□ -0.38
RAB5C-208ENST00000551338 KCNA1Q09470 495 aa12.68□□□□□ -0.38
RAB5C-208ENST00000551338 NFIL3Q16649 462 aa12.68□□□□□ -0.38
RAB5C-208ENST00000551338 TSR1Q2NL82 804 aaKnown RBP12.68□□□□□ -0.38
RAB5C-208ENST00000551338 ZC2HC1CQ53FD0 456 aaPredicted RBP12.68□□□□□ -0.38
RAB5C-208ENST00000551338 PADI6Q6TGC4 694 aa12.68□□□□□ -0.38
RAB5C-208ENST00000551338 FRMD5Q7Z6J6 570 aa12.68□□□□□ -0.38
RAB5C-208ENST00000551338 VSIG10LQ86VR7 867 aa12.68□□□□□ -0.38
RAB5C-208ENST00000551338 NEK11Q8NG66 645 aa12.68□□□□□ -0.38
RAB5C-208ENST00000551338 CNKSR2Q8WXI2 1034 aa12.68□□□□□ -0.38
RAB5C-208ENST00000551338 DCPSQ96C86 337 aaKnown RBP12.68□□□□□ -0.38
RAB5C-208ENST00000551338 INPP4AQ96PE3 977 aaPredicted RBP12.68□□□□□ -0.38
RAB5C-208ENST00000551338 LSM14BQ9BX40 385 aaKnown RBP12.68□□□□□ -0.38
RAB5C-208ENST00000551338 STRA6Q9BX79 667 aa12.68□□□□□ -0.38
RAB5C-208ENST00000551338 EDEM3Q9BZQ6 932 aa12.68□□□□□ -0.38
RAB5C-208ENST00000551338 MAF1Q9H063 256 aa12.68□□□□□ -0.38
RAB5C-208ENST00000551338 MMRN2Q9H8L6 949 aa12.68□□□□□ -0.38
RAB5C-208ENST00000551338 A1CFQ9NQ94 594 aaKnown RBP12.68□□□□□ -0.38
RAB5C-208ENST00000551338 FAM207AQ9NSI2 230 aaPredicted RBP12.68□□□□□ -0.38
RAB5C-208ENST00000551338 CYP39A1Q9NYL5 469 aa12.68□□□□□ -0.38
RAB5C-208ENST00000551338 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.68□□□□□ -0.38
RAB5C-208ENST00000551338 EIF3CLB5ME19 914 aaKnown RBP12.67□□□□□ -0.38
RAB5C-208ENST00000551338 SLC16A3O15427 465 aaKnown RBP12.67□□□□□ -0.38
RAB5C-208ENST00000551338 RGS20O76081 388 aa12.67□□□□□ -0.38
RAB5C-208ENST00000551338 URI1O94763 535 aaPredicted RBP12.67□□□□□ -0.38
RAB5C-208ENST00000551338 NOL4O94818 638 aa12.67□□□□□ -0.38
RAB5C-208ENST00000551338 QARSP47897 775 aaKnown RBP12.67□□□□□ -0.38
RAB5C-208ENST00000551338 CASP4P49662 377 aa12.67□□□□□ -0.38
RAB5C-208ENST00000551338 RARRES1P49788 294 aa12.67□□□□□ -0.38
RAB5C-208ENST00000551338 KRT76Q01546 638 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms