RNA–Protein interactions for RNA: ENST00000550964.5

PFDN5-213, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-213ENST00000550964 HAUS3Q68CZ6 603 aa11.27□□□□□ -0.61
PFDN5-213ENST00000550964 LRRC8DQ7L1W4 858 aa11.27□□□□□ -0.61
PFDN5-213ENST00000550964 LMBR1Q8WVP7 490 aa11.27□□□□□ -0.61
PFDN5-213ENST00000550964 APBB2Q92870 758 aa11.27□□□□□ -0.61
PFDN5-213ENST00000550964 CCDC43Q96MW1 224 aaKnown RBP11.27□□□□□ -0.61
PFDN5-213ENST00000550964 PPP1R12CQ9BZL4 782 aa11.27□□□□□ -0.61
PFDN5-213ENST00000550964 ZSWIM4Q9H7M6 989 aa11.27□□□□□ -0.61
PFDN5-213ENST00000550964 TTC12Q9H892 705 aaPredicted RBP11.27□□□□□ -0.61
PFDN5-213ENST00000550964 GABBR1Q9UBS5 961 aa11.27□□□□□ -0.61
PFDN5-213ENST00000550964 PCDHA2Q9Y5H9 948 aa11.27□□□□□ -0.61
PFDN5-213ENST00000550964 IGSF9BQ9UPX0 1349 aa11.27□□□□□ -0.61
PFDN5-213ENST00000550964 SMIM35A0A1B0GVV1 85 aa11.26□□□□□ -0.61
PFDN5-213ENST00000550964 RSPH10B2B2RC85 870 aa11.26□□□□□ -0.61
PFDN5-213ENST00000550964 ADAMTS3O15072 1205 aa11.26□□□□□ -0.61
PFDN5-213ENST00000550964 CHMP2AO43633 222 aa11.26□□□□□ -0.61
PFDN5-213ENST00000550964 SLC37A4O43826 429 aa11.26□□□□□ -0.61
PFDN5-213ENST00000550964 BAIAP3O94812 1187 aa11.26□□□□□ -0.61
PFDN5-213ENST00000550964 CD2BP2O95400 341 aaKnown RBP11.26□□□□□ -0.61
PFDN5-213ENST00000550964 OATP04181 439 aa11.26□□□□□ -0.61
PFDN5-213ENST00000550964 OR52Z1P0C646 297 aa11.26□□□□□ -0.61
PFDN5-213ENST00000550964 IQCF3P0C7M6 154 aa11.26□□□□□ -0.61
PFDN5-213ENST00000550964 RSPH10BP0C881 870 aa11.26□□□□□ -0.61
PFDN5-213ENST00000550964 CYP2C9P11712 490 aa11.26□□□□□ -0.61
PFDN5-213ENST00000550964 CKBP12277 381 aa11.26□□□□□ -0.61
PFDN5-213ENST00000550964 INSRRP14616 1297 aa11.26□□□□□ -0.61
PFDN5-213ENST00000550964 MCM7P33993 719 aa11.26□□□□□ -0.61
PFDN5-213ENST00000550964 THPOP40225 353 aa11.26□□□□□ -0.61
PFDN5-213ENST00000550964 TXKP42681 527 aa11.26□□□□□ -0.61
PFDN5-213ENST00000550964 FOSBP53539 338 aa11.26□□□□□ -0.61
PFDN5-213ENST00000550964 ADAM17P78536 824 aa11.26□□□□□ -0.61
PFDN5-213ENST00000550964 CACNB1Q02641 598 aaPredicted RBP11.26□□□□□ -0.61
PFDN5-213ENST00000550964 MAPK8IP2Q13387 824 aaPredicted RBP11.26□□□□□ -0.61
PFDN5-213ENST00000550964 ARL6IP4Q66PJ3 421 aaKnown RBP11.26□□□□□ -0.61
PFDN5-213ENST00000550964 GPR153Q6NV75 609 aa11.26□□□□□ -0.61
PFDN5-213ENST00000550964 B3GNT9Q6UX72 402 aa11.26□□□□□ -0.61
PFDN5-213ENST00000550964 SH3RF1Q7Z6J0 888 aa11.26□□□□□ -0.61
PFDN5-213ENST00000550964 CCDC60Q8IWA6 550 aaPredicted RBP11.26□□□□□ -0.61
PFDN5-213ENST00000550964 C4orf19Q8IY42 314 aa11.26□□□□□ -0.61
PFDN5-213ENST00000550964 MAP7D2Q96T17 732 aa11.26□□□□□ -0.61
PFDN5-213ENST00000550964 NIFKQ9BYG3 293 aaKnown RBP11.26□□□□□ -0.61
PFDN5-213ENST00000550964 UNC45AQ9H3U1 944 aa11.26□□□□□ -0.61
PFDN5-213ENST00000550964 BCAS3Q9H6U6 928 aa11.26□□□□□ -0.61
PFDN5-213ENST00000550964 SETD4Q9NVD3 440 aa11.26□□□□□ -0.61
PFDN5-213ENST00000550964 VPS37CA5D8V6 355 aaPredicted RBP11.25□□□□□ -0.61
PFDN5-213ENST00000550964 TREHO43280 583 aa11.25□□□□□ -0.61
PFDN5-213ENST00000550964 SLC26A4O43511 780 aa11.25□□□□□ -0.61
PFDN5-213ENST00000550964 ATP2B1P20020 1258 aa11.25□□□□□ -0.61
PFDN5-213ENST00000550964 MARK3P27448 753 aa11.25□□□□□ -0.61
PFDN5-213ENST00000550964 CYP2C18P33260 490 aa11.25□□□□□ -0.61
PFDN5-213ENST00000550964 LRIT3Q3SXY7 679 aa11.25□□□□□ -0.61
PFDN5-213ENST00000550964 DTHD1Q6ZMT9 781 aa11.25□□□□□ -0.61
PFDN5-213ENST00000550964 TRIM50Q86XT4 487 aa11.25□□□□□ -0.61
PFDN5-213ENST00000550964 HAS1Q92839 578 aa11.25□□□□□ -0.61
PFDN5-213ENST00000550964 MTMR9Q96QG7 549 aa11.25□□□□□ -0.61
PFDN5-213ENST00000550964 PCYT2Q99447 389 aa11.25□□□□□ -0.61
PFDN5-213ENST00000550964 FTOQ9C0B1 505 aaKnown RBP eCLIP11.25□□□□□ -0.61
PFDN5-213ENST00000550964 PRO3102Q9H379 93 aa11.25□□□□□ -0.61
PFDN5-213ENST00000550964 TUFT1Q9NNX1 390 aa11.25□□□□□ -0.61
PFDN5-213ENST00000550964 COLQQ9Y215 455 aaPredicted RBP11.25□□□□□ -0.61
PFDN5-213ENST00000550964 ABHD14A-ACY1A0A1B0GW23 586 aa11.24□□□□□ -0.61
PFDN5-213ENST00000550964 STX6O43752 255 aa11.24□□□□□ -0.61
PFDN5-213ENST00000550964 EDIL3O43854 480 aa11.24□□□□□ -0.61
PFDN5-213ENST00000550964 LYPLA2O95372 231 aa11.24□□□□□ -0.61
PFDN5-213ENST00000550964 CSF2RAP15509 400 aa11.24□□□□□ -0.61
PFDN5-213ENST00000550964 KLRC1P26715 233 aa11.24□□□□□ -0.61
PFDN5-213ENST00000550964 RFC5P40937 340 aa11.24□□□□□ -0.61
PFDN5-213ENST00000550964 FXR2P51116 673 aaKnown RBP eCLIP11.24□□□□□ -0.61
PFDN5-213ENST00000550964 PRKCEQ02156 737 aa11.24□□□□□ -0.61
PFDN5-213ENST00000550964 TBC1D8BQ0IIM8 1120 aa11.24□□□□□ -0.61
PFDN5-213ENST00000550964 IKBKEQ14164 716 aa11.24□□□□□ -0.61
PFDN5-213ENST00000550964 EARS2Q5JPH6 523 aaKnown RBP11.24□□□□□ -0.61
PFDN5-213ENST00000550964 FAM26DQ5JW98 314 aa11.24□□□□□ -0.61
PFDN5-213ENST00000550964 NCAPH2Q6IBW4 605 aa11.24□□□□□ -0.61
PFDN5-213ENST00000550964 CNKSR3Q6P9H4 555 aa11.24□□□□□ -0.61
PFDN5-213ENST00000550964 MTHFD1LQ6UB35 978 aa11.24□□□□□ -0.61
PFDN5-213ENST00000550964 PHOSPHO2Q8TCD6 241 aa11.24□□□□□ -0.61
PFDN5-213ENST00000550964 TCP11Q8WWU5 503 aa11.24□□□□□ -0.61
PFDN5-213ENST00000550964 SLC7A3Q8WY07 619 aa11.24□□□□□ -0.61
PFDN5-213ENST00000550964 SEPT8Q92599 483 aa11.24□□□□□ -0.61
PFDN5-213ENST00000550964 RNPC3Q96LT9 517 aaKnown RBP11.24□□□□□ -0.61
PFDN5-213ENST00000550964 INO80BQ9C086 356 aaPredicted RBP11.24□□□□□ -0.61
PFDN5-213ENST00000550964 VAV3Q9UKW4 847 aa11.24□□□□□ -0.61
PFDN5-213ENST00000550964 SCN5AQ14524 2016 aa11.23□□□□□ -0.61
PFDN5-213ENST00000550964 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.23□□□□□ -0.61
PFDN5-213ENST00000550964 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.23□□□□□ -0.61
PFDN5-213ENST00000550964 DDX11L8A8MPP1 907 aa11.23□□□□□ -0.61
PFDN5-213ENST00000550964 KIF28PB7ZC32 967 aa11.23□□□□□ -0.61
PFDN5-213ENST00000550964 ASAP2O43150 1006 aa11.23□□□□□ -0.61
PFDN5-213ENST00000550964 CXCL10P02778 98 aa11.23□□□□□ -0.61
PFDN5-213ENST00000550964 SYT1P21579 422 aa11.23□□□□□ -0.61
PFDN5-213ENST00000550964 KCNJ6P48051 423 aa11.23□□□□□ -0.61
PFDN5-213ENST00000550964 CCL23P55773 120 aa11.23□□□□□ -0.61
PFDN5-213ENST00000550964 IGBP1P78318 339 aa11.23□□□□□ -0.61
PFDN5-213ENST00000550964 PTGDRQ13258 359 aa11.23□□□□□ -0.61
PFDN5-213ENST00000550964 ZNF174Q15697 407 aa11.23□□□□□ -0.61
PFDN5-213ENST00000550964 HABP4Q5JVS0 413 aaKnown RBP11.23□□□□□ -0.61
PFDN5-213ENST00000550964 KRT79Q5XKE5 535 aa11.23□□□□□ -0.61
PFDN5-213ENST00000550964 ATL3Q6DD88 541 aa11.23□□□□□ -0.61
PFDN5-213ENST00000550964 HERVK_113Q902F9 699 aa11.23□□□□□ -0.61
PFDN5-213ENST00000550964 AK8Q96MA6 479 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms