RNA–Protein interactions for RNA: ENST00000550657.1

UBE2N-205, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2 BASIC

Gene UBE2N, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-205ENST00000550657 NFU1Q9UMS0 254 aa10.09□□□□□ -0.79
UBE2N-205ENST00000550657 RABGAP1Q9Y3P9 1069 aa10.09□□□□□ -0.79
UBE2N-205ENST00000550657 MYO3BQ8WXR4 1341 aa10.09□□□□□ -0.79
UBE2N-205ENST00000550657 GOLGA6CA6NDK9 693 aa10.09□□□□□ -0.79
UBE2N-205ENST00000550657 KCNK3O14649 394 aa10.09□□□□□ -0.79
UBE2N-205ENST00000550657 PJA2O43164 708 aa10.09□□□□□ -0.79
UBE2N-205ENST00000550657 HEXIM1O94992 359 aaKnown RBP10.09□□□□□ -0.79
UBE2N-205ENST00000550657 NR3C1P04150 777 aa10.09□□□□□ -0.79
UBE2N-205ENST00000550657 GLI1P08151 1106 aa10.09□□□□□ -0.79
UBE2N-205ENST00000550657 GOLGA6DP0CG33 693 aa10.09□□□□□ -0.79
UBE2N-205ENST00000550657 UCHL3P15374 230 aa10.09□□□□□ -0.79
UBE2N-205ENST00000550657 HSPA1LP34931 641 aa10.09□□□□□ -0.79
UBE2N-205ENST00000550657 CARSP49589 748 aaKnown RBP10.09□□□□□ -0.79
UBE2N-205ENST00000550657 TRADDQ15628 312 aa10.09□□□□□ -0.79
UBE2N-205ENST00000550657 DACT2Q5SW24 774 aa10.09□□□□□ -0.79
UBE2N-205ENST00000550657 SYT2Q8N9I0 419 aaPredicted RBP10.09□□□□□ -0.79
UBE2N-205ENST00000550657 ACER1Q8TDN7 264 aa10.09□□□□□ -0.79
UBE2N-205ENST00000550657 AENQ8WTP8 325 aaKnown RBP10.09□□□□□ -0.79
UBE2N-205ENST00000550657 PRMT6Q96LA8 375 aaPredicted RBP10.09□□□□□ -0.79
UBE2N-205ENST00000550657 EDEM3Q9BZQ6 932 aa10.09□□□□□ -0.79
UBE2N-205ENST00000550657 NUCKS1Q9H1E3 243 aaKnown RBP10.09□□□□□ -0.79
UBE2N-205ENST00000550657 GOLGA6AQ9NYA3 693 aa10.09□□□□□ -0.79
UBE2N-205ENST00000550657 AJAP1Q9UKB5 411 aaPredicted RBP10.09□□□□□ -0.79
UBE2N-205ENST00000550657 CYP3A7-CYP3A51PA0A087WV96 503 aa10.08□□□□□ -0.8
UBE2N-205ENST00000550657 CALUO43852 315 aaPredicted RBP10.08□□□□□ -0.8
UBE2N-205ENST00000550657 FAM13AO94988 1023 aa10.08□□□□□ -0.8
UBE2N-205ENST00000550657 CYP3A7P24462 503 aa10.08□□□□□ -0.8
UBE2N-205ENST00000550657 COG2Q14746 738 aa10.08□□□□□ -0.8
UBE2N-205ENST00000550657 NAB2Q15742 525 aa10.08□□□□□ -0.8
UBE2N-205ENST00000550657 KCTD16Q68DU8 428 aa10.08□□□□□ -0.8
UBE2N-205ENST00000550657 C10orf67Q8IYJ2 551 aa10.08□□□□□ -0.8
UBE2N-205ENST00000550657 TAF4BQ92750 862 aa10.08□□□□□ -0.8
UBE2N-205ENST00000550657 MKL1Q969V6 931 aa10.08□□□□□ -0.8
UBE2N-205ENST00000550657 DYDC2Q96IM9 177 aa10.08□□□□□ -0.8
UBE2N-205ENST00000550657 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.08□□□□□ -0.86e-6■■■■■ 48.1
UBE2N-205ENST00000550657 GCNT4Q9P109 453 aa10.08□□□□□ -0.8
UBE2N-205ENST00000550657 PRR12Q9ULL5 1215 aa10.08□□□□□ -0.8
UBE2N-205ENST00000550657 SCAF8Q9UPN6 1271 aaKnown RBP10.08□□□□□ -0.8
UBE2N-205ENST00000550657 ZC3H4Q9UPT8 1303 aaKnown RBP10.08□□□□□ -0.8
UBE2N-205ENST00000550657 GRID2IPA4D2P6 1211 aa10.08□□□□□ -0.8
UBE2N-205ENST00000550657 OPLAHO14841 1288 aa10.08□□□□□ -0.8
UBE2N-205ENST00000550657 TRIM66O15016 1216 aa10.08□□□□□ -0.8
UBE2N-205ENST00000550657 APBA3O96018 575 aa10.08□□□□□ -0.8
UBE2N-205ENST00000550657 EPB41P11171 864 aaKnown RBP10.08□□□□□ -0.8
UBE2N-205ENST00000550657 PRLRP16471 622 aa10.08□□□□□ -0.8
UBE2N-205ENST00000550657 PON1P27169 355 aa10.08□□□□□ -0.8
UBE2N-205ENST00000550657 AARSP49588 968 aaKnown RBP eCLIP10.08□□□□□ -0.8
UBE2N-205ENST00000550657 CYP2J2P51589 502 aa10.08□□□□□ -0.8
UBE2N-205ENST00000550657 IRX5P78411 483 aaPredicted RBP10.08□□□□□ -0.8
UBE2N-205ENST00000550657 RNF10Q8N5U6 811 aaKnown RBP10.08□□□□□ -0.8
UBE2N-205ENST00000550657 FAM76AQ8TAV0 307 aa10.08□□□□□ -0.8
UBE2N-205ENST00000550657 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.08□□□□□ -0.8
UBE2N-205ENST00000550657 SEPT11Q9NVA2 429 aaKnown RBP10.08□□□□□ -0.8
UBE2N-205ENST00000550657 CEP104O60308 925 aa10.07□□□□□ -0.8
UBE2N-205ENST00000550657 GFPT2O94808 682 aa10.07□□□□□ -0.8
UBE2N-205ENST00000550657 FAM153BP0C7A2 387 aa10.07□□□□□ -0.8
UBE2N-205ENST00000550657 SREBF1P36956 1147 aa10.07□□□□□ -0.8
UBE2N-205ENST00000550657 EDRF1Q3B7T1 1238 aa10.07□□□□□ -0.8
UBE2N-205ENST00000550657 FAM153CQ494X1 144 aa10.07□□□□□ -0.8
UBE2N-205ENST00000550657 KIAA1755Q5JYT7 1200 aa10.07□□□□□ -0.8
UBE2N-205ENST00000550657 STRIP1Q5VSL9 837 aa10.07□□□□□ -0.8
UBE2N-205ENST00000550657 LRRC31Q6UY01 552 aa10.07□□□□□ -0.8
UBE2N-205ENST00000550657 RBM46Q8TBY0 533 aaKnown RBP10.07□□□□□ -0.8
UBE2N-205ENST00000550657 AP1M1Q9BXS5 423 aa10.07□□□□□ -0.8
UBE2N-205ENST00000550657 FAM153AQ9UHL3 310 aa10.07□□□□□ -0.8
UBE2N-205ENST00000550657 UBR3Q6ZT12 1888 aa10.07□□□□□ -0.8
UBE2N-205ENST00000550657 PITPNM2Q9BZ72 1349 aa10.07□□□□□ -0.8
UBE2N-205ENST00000550657 ADAMTSL1Q8N6G6 1762 aa10.07□□□□□ -0.8
UBE2N-205ENST00000550657 RBAK-RBAKDNI3L0D1 243 aa10.07□□□□□ -0.8
UBE2N-205ENST00000550657 ONECUT3O60422 494 aaPredicted RBP10.07□□□□□ -0.8
UBE2N-205ENST00000550657 Q4G0T1 1027 aa10.07□□□□□ -0.8
UBE2N-205ENST00000550657 TBC1D10BQ4KMP7 808 aaPredicted RBP10.07□□□□□ -0.8
UBE2N-205ENST00000550657 LRCH2Q5VUJ6 765 aa10.07□□□□□ -0.8
UBE2N-205ENST00000550657 TATDN1Q6P1N9 297 aa10.07□□□□□ -0.8
UBE2N-205ENST00000550657 ALKBH5Q6P6C2 394 aaKnown RBP10.07□□□□□ -0.8
UBE2N-205ENST00000550657 MIGA2Q7L4E1 593 aa10.07□□□□□ -0.8
UBE2N-205ENST00000550657 MSL3Q8N5Y2 521 aaKnown RBP10.07□□□□□ -0.8
UBE2N-205ENST00000550657 VAV3Q9UKW4 847 aa10.07□□□□□ -0.8
UBE2N-205ENST00000550657 CDK5RAP2Q96SN8 1893 aa10.07□□□□□ -0.8
UBE2N-205ENST00000550657 ASTN1O14525 1302 aa10.07□□□□□ -0.8
UBE2N-205ENST00000550657 FRMD3A2A2Y4 597 aa10.07□□□□□ -0.8
UBE2N-205ENST00000550657 H0YIN7 160 aa10.07□□□□□ -0.8
UBE2N-205ENST00000550657 HSF2BPO75031 334 aa10.07□□□□□ -0.8
UBE2N-205ENST00000550657 HLTFQ14527 1009 aaKnown RBP eCLIP10.07□□□□□ -0.8
UBE2N-205ENST00000550657 RPS6KA1Q15418 735 aa10.07□□□□□ -0.8
UBE2N-205ENST00000550657 MUM1L1Q5H9M0 696 aa10.07□□□□□ -0.8
UBE2N-205ENST00000550657 PPP4R3CPQ6ZMV5 832 aa10.07□□□□□ -0.8
UBE2N-205ENST00000550657 IRF2BP2Q7Z5L9 587 aa10.07□□□□□ -0.8
UBE2N-205ENST00000550657 SH2D3CQ8N5H7 860 aa10.07□□□□□ -0.8
UBE2N-205ENST00000550657 U2AF1L4Q8WU68 220 aaKnown RBP10.07□□□□□ -0.8
UBE2N-205ENST00000550657 SYN2Q92777 582 aaPredicted RBP10.07□□□□□ -0.8
UBE2N-205ENST00000550657 FAM20AQ96MK3 541 aa10.07□□□□□ -0.8
UBE2N-205ENST00000550657 CCDC43Q96MW1 224 aaKnown RBP10.07□□□□□ -0.8
UBE2N-205ENST00000550657 SH2D3AQ9BRG2 576 aa10.07□□□□□ -0.8
UBE2N-205ENST00000550657 WDR18Q9BV38 432 aa10.07□□□□□ -0.8
UBE2N-205ENST00000550657 IDI2Q9BXS1 227 aa10.07□□□□□ -0.8
UBE2N-205ENST00000550657 VEZTQ9HBM0 779 aa10.07□□□□□ -0.8
UBE2N-205ENST00000550657 AIPL1Q9NZN9 384 aa10.07□□□□□ -0.8
UBE2N-205ENST00000550657 FOSP01100 380 aaPredicted RBP10.06□□□□□ -0.8
UBE2N-205ENST00000550657 KRT14P02533 472 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms