RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 ARL6IP4Q66PJ3 421 aaKnown RBP13.25□□□□□ -0.29
NR4A1-215ENST00000550557 AKT1S1Q96B36 256 aa13.25□□□□□ -0.29
NR4A1-215ENST00000550557 EMILIN3Q9NT22 766 aa13.25□□□□□ -0.29
NR4A1-215ENST00000550557 MTRF1LQ9UGC7 380 aaKnown RBP13.25□□□□□ -0.29
NR4A1-215ENST00000550557 A0A087WWV3 80 aa13.25□□□□□ -0.29
NR4A1-215ENST00000550557 CAPN15O75808 1086 aa13.25□□□□□ -0.29
NR4A1-215ENST00000550557 RASA1P20936 1047 aa13.25□□□□□ -0.29
NR4A1-215ENST00000550557 OAS2P29728 719 aaKnown RBP13.25□□□□□ -0.29
NR4A1-215ENST00000550557 ITKQ08881 620 aa13.25□□□□□ -0.29
NR4A1-215ENST00000550557 IER5Q5VY09 327 aa13.25□□□□□ -0.29
NR4A1-215ENST00000550557 TXNRD3Q86VQ6 643 aa13.25□□□□□ -0.29
NR4A1-215ENST00000550557 STAG2Q8N3U4 1231 aa13.25□□□□□ -0.29
NR4A1-215ENST00000550557 GPR161Q8N6U8 529 aaKnown RBP13.25□□□□□ -0.29
NR4A1-215ENST00000550557 DYDC2Q96IM9 177 aa13.25□□□□□ -0.29
NR4A1-215ENST00000550557 GDAQ9Y2T3 454 aa13.25□□□□□ -0.29
NR4A1-215ENST00000550557 PPP2R2CQ9Y2T4 447 aa13.25□□□□□ -0.29
NR4A1-215ENST00000550557 PCDHB6Q9Y5E3 794 aa13.25□□□□□ -0.29
NR4A1-215ENST00000550557 PEAK1Q9H792 1746 aa13.25□□□□□ -0.29
NR4A1-215ENST00000550557 EFCAB8A8MWE9 144 aa13.25□□□□□ -0.29
NR4A1-215ENST00000550557 FAM83AQ86UY5 434 aa13.25□□□□□ -0.29
NR4A1-215ENST00000550557 SIX6OS1Q8N1H7 587 aa13.25□□□□□ -0.29
NR4A1-215ENST00000550557 OR6B3Q8NGW1 331 aa13.25□□□□□ -0.29
NR4A1-215ENST00000550557 KIF9Q9HAQ2 790 aa13.25□□□□□ -0.29
NR4A1-215ENST00000550557 GJB4Q9NTQ9 266 aa13.25□□□□□ -0.29
NR4A1-215ENST00000550557 ABCB4P21439 1286 aa13.24□□□□□ -0.29
NR4A1-215ENST00000550557 CDCA5Q96FF9 252 aa13.24□□□□□ -0.29
NR4A1-215ENST00000550557 GSDMAQ96QA5 445 aa13.24□□□□□ -0.29
NR4A1-215ENST00000550557 GOLPH3LQ9H4A5 285 aa13.24□□□□□ -0.29
NR4A1-215ENST00000550557 RIC8AQ9NPQ8 531 aa13.24□□□□□ -0.29
NR4A1-215ENST00000550557 SPDYE16A6NNV3 312 aaPredicted RBP13.24□□□□□ -0.29
NR4A1-215ENST00000550557 WNT10BO00744 389 aa13.24□□□□□ -0.29
NR4A1-215ENST00000550557 HOXA10P31260 410 aaPredicted RBP13.24□□□□□ -0.29
NR4A1-215ENST00000550557 CPT1AP50416 773 aa13.24□□□□□ -0.29
NR4A1-215ENST00000550557 TSPY1Q01534 308 aa13.24□□□□□ -0.29
NR4A1-215ENST00000550557 SPDYE2Q495Y8 402 aa13.24□□□□□ -0.29
NR4A1-215ENST00000550557 BBS5Q8N3I7 341 aa13.24□□□□□ -0.29
NR4A1-215ENST00000550557 POTEMA6NI47 508 aa13.24□□□□□ -0.29
NR4A1-215ENST00000550557 SFI1A8K8P3 1242 aa13.24□□□□□ -0.29
NR4A1-215ENST00000550557 ADKP55263 362 aaKnown RBP13.24□□□□□ -0.29
NR4A1-215ENST00000550557 FKBP3Q00688 224 aaKnown RBP13.24□□□□□ -0.29
NR4A1-215ENST00000550557 SGMS1Q86VZ5 419 aa13.24□□□□□ -0.29
NR4A1-215ENST00000550557 FMR1NBQ8N0W7 255 aaPredicted RBP13.24□□□□□ -0.29
NR4A1-215ENST00000550557 RYBPQ8N488 228 aaPredicted RBP13.24□□□□□ -0.29
NR4A1-215ENST00000550557 MROH8Q9H579 483 aa13.24□□□□□ -0.29
NR4A1-215ENST00000550557 NWD1Q149M9 1564 aa13.24□□□□□ -0.29
NR4A1-215ENST00000550557 CDC42EP1Q00587 391 aa13.24□□□□□ -0.29
NR4A1-215ENST00000550557 BEST2Q8NFU1 509 aa13.24□□□□□ -0.29
NR4A1-215ENST00000550557 FMN2Q9NZ56 1722 aa13.23□□□□□ -0.29
NR4A1-215ENST00000550557 CXCL11O14625 94 aa13.23□□□□□ -0.29
NR4A1-215ENST00000550557 HUS1O60921 280 aa13.23□□□□□ -0.29
NR4A1-215ENST00000550557 MXI1P50539 228 aa13.23□□□□□ -0.29
NR4A1-215ENST00000550557 FAM81BQ96LP2 452 aa13.23□□□□□ -0.29
NR4A1-215ENST00000550557 SLC8A2Q9UPR5 921 aa13.23□□□□□ -0.29
NR4A1-215ENST00000550557 GOLGA8IPA6NC78 632 aa13.23□□□□□ -0.29
NR4A1-215ENST00000550557 GOLGA8JA6NMD2 632 aa13.23□□□□□ -0.29
NR4A1-215ENST00000550557 PDHXO00330 501 aa13.23□□□□□ -0.29
NR4A1-215ENST00000550557 USP11P51784 963 aa13.23□□□□□ -0.29
NR4A1-215ENST00000550557 TYW1BQ6NUM6 668 aa13.23□□□□□ -0.29
NR4A1-215ENST00000550557 SCN4BQ8IWT1 228 aa13.23□□□□□ -0.29
NR4A1-215ENST00000550557 ARFGAP2Q8N6H7 521 aa13.23□□□□□ -0.29
NR4A1-215ENST00000550557 SPZ1Q9BXG8 430 aa13.23□□□□□ -0.29
NR4A1-215ENST00000550557 NSRP1Q9H0G5 558 aaKnown RBP13.23□□□□□ -0.29
NR4A1-215ENST00000550557 CPSF3Q9UKF6 684 aaKnown RBP13.23□□□□□ -0.29
NR4A1-215ENST00000550557 THAP12O43422 761 aa13.23□□□□□ -0.29
NR4A1-215ENST00000550557 MYL1P05976 194 aa13.23□□□□□ -0.29
NR4A1-215ENST00000550557 CASP7P55210 303 aa13.23□□□□□ -0.29
NR4A1-215ENST00000550557 POLR2FP61218 127 aaKnown RBP13.23□□□□□ -0.29
NR4A1-215ENST00000550557 STMN4Q9H169 189 aaPredicted RBP13.23□□□□□ -0.29
NR4A1-215ENST00000550557 KCNF1Q9H3M0 494 aa13.23□□□□□ -0.29
NR4A1-215ENST00000550557 CD58P19256 250 aa13.23□□□□□ -0.29
NR4A1-215ENST00000550557 NOGQ13253 232 aa13.23□□□□□ -0.29
NR4A1-215ENST00000550557 ZNF667Q5HYK9 610 aa13.23□□□□□ -0.29
NR4A1-215ENST00000550557 TMTC1Q8IUR5 882 aa13.23□□□□□ -0.29
NR4A1-215ENST00000550557 ZBTB9Q96C00 473 aa13.23□□□□□ -0.29
NR4A1-215ENST00000550557 IL17RAQ96F46 866 aa13.23□□□□□ -0.29
NR4A1-215ENST00000550557 GPRC5DQ9NZD1 345 aa13.23□□□□□ -0.29
NR4A1-215ENST00000550557 PIN4Q9Y237 131 aaKnown RBP13.23□□□□□ -0.29
NR4A1-215ENST00000550557 SLFN14P0C7P3 912 aa13.22□□□□□ -0.29
NR4A1-215ENST00000550557 ATN1P54259 1190 aaPredicted RBP13.22□□□□□ -0.29
NR4A1-215ENST00000550557 INHBEP58166 350 aa13.22□□□□□ -0.29
NR4A1-215ENST00000550557 DGKDQ16760 1214 aa13.22□□□□□ -0.29
NR4A1-215ENST00000550557 GANCQ8TET4 914 aa13.22□□□□□ -0.29
NR4A1-215ENST00000550557 LXNQ9BS40 222 aa13.22□□□□□ -0.29
NR4A1-215ENST00000550557 SRPRBQ9Y5M8 271 aaKnown RBP13.22□□□□□ -0.29
NR4A1-215ENST00000550557 LONRF3Q496Y0 759 aa13.22□□□□□ -0.29
NR4A1-215ENST00000550557 C3orf67Q6ZVT6 689 aa13.22□□□□□ -0.29
NR4A1-215ENST00000550557 SYCE1Q8N0S2 351 aa13.22□□□□□ -0.29
NR4A1-215ENST00000550557 ACER1Q8TDN7 264 aa13.22□□□□□ -0.29
NR4A1-215ENST00000550557 CDC27P30260 824 aa13.22□□□□□ -0.29
NR4A1-215ENST00000550557 SPATA1Q5VX52 437 aa13.22□□□□□ -0.29
NR4A1-215ENST00000550557 SCARA5Q6ZMJ2 495 aa13.22□□□□□ -0.29
NR4A1-215ENST00000550557 NME8Q8N427 588 aa13.22□□□□□ -0.29
NR4A1-215ENST00000550557 CCDC26Q8TAB7 109 aa13.22□□□□□ -0.29
NR4A1-215ENST00000550557 DHTKD1Q96HY7 919 aaPredicted RBP13.22□□□□□ -0.29
NR4A1-215ENST00000550557 AGBL1Q96MI9 1066 aa13.22□□□□□ -0.29
NR4A1-215ENST00000550557 A6NJR5 290 aa13.22□□□□□ -0.29
NR4A1-215ENST00000550557 IL1R1P14778 569 aa13.22□□□□□ -0.29
NR4A1-215ENST00000550557 C6orf163Q5TEZ5 329 aa13.22□□□□□ -0.29
NR4A1-215ENST00000550557 RESP18Q5W5W9 173 aa13.22□□□□□ -0.29
NR4A1-215ENST00000550557 HEXIM2Q96MH2 286 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms