RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 DPYSL5Q9BPU6 564 aa4.28□□□□□ -1.72
CCNT1-203ENST00000550457 AARSD1Q9BTE6 412 aaKnown RBP4.28□□□□□ -1.72
CCNT1-203ENST00000550457 CARD11Q9BXL7 1154 aa4.28□□□□□ -1.72
CCNT1-203ENST00000550457 OAZ3Q9UMX2 235 aa4.28□□□□□ -1.72
CCNT1-203ENST00000550457 NCAPD3P42695 1498 aa4.28□□□□□ -1.72
CCNT1-203ENST00000550457 TOP2BQ02880 1626 aa4.28□□□□□ -1.72
CCNT1-203ENST00000550457 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.27□□□□□ -1.73
CCNT1-203ENST00000550457 ZNF202O95125 648 aa4.27□□□□□ -1.73
CCNT1-203ENST00000550457 FGFR1P11362 822 aa4.27□□□□□ -1.73
CCNT1-203ENST00000550457 ACO1P21399 889 aaKnown RBP4.27□□□□□ -1.73
CCNT1-203ENST00000550457 POLD1P28340 1107 aa4.27□□□□□ -1.73
CCNT1-203ENST00000550457 ERCC5P28715 1186 aaPredicted RBP4.27□□□□□ -1.73
CCNT1-203ENST00000550457 RAC3P60763 192 aa4.27□□□□□ -1.73
CCNT1-203ENST00000550457 DBPQ10586 325 aaPredicted RBP4.27□□□□□ -1.73
CCNT1-203ENST00000550457 TBR1Q16650 682 aa4.27□□□□□ -1.73
CCNT1-203ENST00000550457 DDR2Q16832 855 aa4.27□□□□□ -1.73
CCNT1-203ENST00000550457 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.27□□□□□ -1.73
CCNT1-203ENST00000550457 SGSM3Q96HU1 749 aa4.27□□□□□ -1.73
CCNT1-203ENST00000550457 ZFYVE21Q9BQ24 234 aa4.27□□□□□ -1.73
CCNT1-203ENST00000550457 NUB1Q9Y5A7 615 aa4.27□□□□□ -1.73
CCNT1-203ENST00000550457 KIF27Q86VH2 1401 aa4.27□□□□□ -1.73
CCNT1-203ENST00000550457 NCOA2Q15596 1464 aa4.26□□□□□ -1.73
CCNT1-203ENST00000550457 FAM90A27PA6NNH2 459 aa4.26□□□□□ -1.73
CCNT1-203ENST00000550457 CR2P20023 1033 aa4.26□□□□□ -1.73
CCNT1-203ENST00000550457 RRADP55042 308 aa4.26□□□□□ -1.73
CCNT1-203ENST00000550457 NSMFQ6X4W1 530 aa4.26□□□□□ -1.73
CCNT1-203ENST00000550457 IFNL3Q8IZI9 196 aa4.26□□□□□ -1.73
CCNT1-203ENST00000550457 TINF2Q9BSI4 451 aa4.26□□□□□ -1.73
CCNT1-203ENST00000550457 SLC30A1Q9Y6M5 507 aa4.26□□□□□ -1.73
CCNT1-203ENST00000550457 UACAQ9BZF9 1416 aa4.26□□□□□ -1.73
CCNT1-203ENST00000550457 LRRC9Q6ZRR7 1453 aa4.25□□□□□ -1.73
CCNT1-203ENST00000550457 FAM47E-STBD1D6RA91 191 aa4.25□□□□□ -1.73
CCNT1-203ENST00000550457 KLF4O43474 513 aa4.25□□□□□ -1.73
CCNT1-203ENST00000550457 CUTAO60888 179 aa4.25□□□□□ -1.73
CCNT1-203ENST00000550457 C1SP09871 688 aa4.25□□□□□ -1.73
CCNT1-203ENST00000550457 PTPN1P18031 435 aaKnown RBP4.25□□□□□ -1.73
CCNT1-203ENST00000550457 ETV4P43268 484 aa4.25□□□□□ -1.73
CCNT1-203ENST00000550457 TGFB2P61812 414 aa4.25□□□□□ -1.73
CCNT1-203ENST00000550457 PTH1RQ03431 593 aa4.25□□□□□ -1.73
CCNT1-203ENST00000550457 ABHD18Q0P651 414 aa4.25□□□□□ -1.73
CCNT1-203ENST00000550457 TIAM1Q13009 1591 aa4.25□□□□□ -1.73
CCNT1-203ENST00000550457 BTBD8Q5XKL5 378 aa4.25□□□□□ -1.73
CCNT1-203ENST00000550457 MAMDC4Q6UXC1 1216 aa4.25□□□□□ -1.73
CCNT1-203ENST00000550457 ANKS3Q6ZW76 656 aa4.25□□□□□ -1.73
CCNT1-203ENST00000550457 LARP4Q71RC2 724 aaKnown RBP eCLIP4.25□□□□□ -1.73
CCNT1-203ENST00000550457 POLNQ7Z5Q5 900 aa4.25□□□□□ -1.73
CCNT1-203ENST00000550457 FAM43AQ8N2R8 423 aa4.25□□□□□ -1.73
CCNT1-203ENST00000550457 IL17DQ8TAD2 202 aa4.25□□□□□ -1.73
CCNT1-203ENST00000550457 CFHR4Q92496 578 aa4.25□□□□□ -1.73
CCNT1-203ENST00000550457 CHFRQ96EP1 664 aa4.25□□□□□ -1.73
CCNT1-203ENST00000550457 PLA2G12BQ9BX93 195 aa4.25□□□□□ -1.73
CCNT1-203ENST00000550457 CSRNP2Q9H175 543 aa4.25□□□□□ -1.73
CCNT1-203ENST00000550457 CNTLNQ9NXG0 1405 aa4.25□□□□□ -1.73
CCNT1-203ENST00000550457 SRPK3Q9UPE1 567 aa4.25□□□□□ -1.73
CCNT1-203ENST00000550457 TRAF6Q9Y4K3 522 aa4.25□□□□□ -1.73
CCNT1-203ENST00000550457 CCDC18Q5T9S5 1454 aa4.24□□□□□ -1.73
CCNT1-203ENST00000550457 ARHGAP35Q9NRY4 1499 aa4.24□□□□□ -1.73
CCNT1-203ENST00000550457 ARID4BQ4LE39 1312 aaPredicted RBP4.24□□□□□ -1.73
CCNT1-203ENST00000550457 MAN2B1O00754 1011 aa4.24□□□□□ -1.73
CCNT1-203ENST00000550457 CDC14BO60729 498 aa4.24□□□□□ -1.73
CCNT1-203ENST00000550457 AMY2AP04746 511 aa4.24□□□□□ -1.73
CCNT1-203ENST00000550457 AMY2BP19961 511 aa4.24□□□□□ -1.73
CCNT1-203ENST00000550457 IL13RA1P78552 427 aa4.24□□□□□ -1.73
CCNT1-203ENST00000550457 IFRD2Q12894 506 aaPredicted RBP4.24□□□□□ -1.73
CCNT1-203ENST00000550457 NFYCQ13952 458 aa4.24□□□□□ -1.73
CCNT1-203ENST00000550457 LSM12Q3MHD2 195 aaKnown RBP4.24□□□□□ -1.73
CCNT1-203ENST00000550457 ZNF568Q3ZCX4 644 aa4.24□□□□□ -1.73
CCNT1-203ENST00000550457 ARHGAP36Q6ZRI8 547 aa4.24□□□□□ -1.73
CCNT1-203ENST00000550457 ZNF808Q8N4W9 903 aaPredicted RBP4.24□□□□□ -1.73
CCNT1-203ENST00000550457 CACTINQ8WUQ7 758 aaKnown RBP4.24□□□□□ -1.73
CCNT1-203ENST00000550457 OR14A2Q96R54 314 aa4.24□□□□□ -1.73
CCNT1-203ENST00000550457 SIN3AQ96ST3 1273 aa4.24□□□□□ -1.73
CCNT1-203ENST00000550457 ZDHHC5Q9C0B5 715 aa4.24□□□□□ -1.73
CCNT1-203ENST00000550457 KIAA1683Q9H0B3 1180 aa4.24□□□□□ -1.73
CCNT1-203ENST00000550457 IKZF4Q9H2S9 585 aa4.24□□□□□ -1.73
CCNT1-203ENST00000550457 PRKRIP1Q9H875 184 aaPredicted RBP4.24□□□□□ -1.73
CCNT1-203ENST00000550457 NUDCQ9Y266 331 aa4.24□□□□□ -1.73
CCNT1-203ENST00000550457 NR2E1Q9Y466 385 aa4.24□□□□□ -1.73
CCNT1-203ENST00000550457 KTN1Q86UP2 1357 aaKnown RBP4.24□□□□□ -1.73
CCNT1-203ENST00000550457 BIVM-ERCC5R4GMW8 1640 aa4.24□□□□□ -1.73
CCNT1-203ENST00000550457 AQRO60306 1485 aaKnown RBP eCLIP4.24□□□□□ -1.733e-7■■■■■ 36.6
CCNT1-203ENST00000550457 HFM1A2PYH4 1435 aa4.23□□□□□ -1.73
CCNT1-203ENST00000550457 TRAV20A0A0B4J274 112 aa4.23□□□□□ -1.73
CCNT1-203ENST00000550457 IQCA1LA6NCM1 817 aa4.23□□□□□ -1.73
CCNT1-203ENST00000550457 ADCY8P40145 1251 aa4.23□□□□□ -1.73
CCNT1-203ENST00000550457 ARID5AQ03989 594 aa4.23□□□□□ -1.73
CCNT1-203ENST00000550457 FOXL1Q12952 345 aa4.23□□□□□ -1.73
CCNT1-203ENST00000550457 WDR72Q3MJ13 1102 aa4.23□□□□□ -1.73
CCNT1-203ENST00000550457 FNDC7Q5VTL7 733 aa4.23□□□□□ -1.73
CCNT1-203ENST00000550457 C1orf210Q8IVY1 113 aa4.23□□□□□ -1.73
CCNT1-203ENST00000550457 AMER2Q8N7J2 671 aa4.23□□□□□ -1.73
CCNT1-203ENST00000550457 ALG1Q9BT22 464 aa4.23□□□□□ -1.73
CCNT1-203ENST00000550457 TRIM8Q9BZR9 551 aa4.23□□□□□ -1.73
CCNT1-203ENST00000550457 RIC8BQ9NVN3 520 aa4.23□□□□□ -1.73
CCNT1-203ENST00000550457 BTBD7Q9P203 1132 aa4.23□□□□□ -1.73
CCNT1-203ENST00000550457 ARHGAP28Q9P2N2 729 aa4.23□□□□□ -1.73
CCNT1-203ENST00000550457 C11orf21Q9P2W6 132 aa4.23□□□□□ -1.73
CCNT1-203ENST00000550457 NCOA1Q15788 1441 aa4.22□□□□□ -1.73
CCNT1-203ENST00000550457 WNT9AO14904 365 aa4.22□□□□□ -1.73
CCNT1-203ENST00000550457 ARHGAP6O43182 974 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms