RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 VSIG1Q86XK7 387 aa13.16□□□□□ -0.3
VDR-208ENST00000550325 SNX29Q8TEQ0 813 aa13.16□□□□□ -0.3
VDR-208ENST00000550325 LARP4BQ92615 738 aaKnown RBP13.16□□□□□ -0.3
VDR-208ENST00000550325 L3MBTL3Q96JM7 780 aaPredicted RBP13.16□□□□□ -0.3
VDR-208ENST00000550325 C7orf25Q9BPX7 421 aa13.16□□□□□ -0.3
VDR-208ENST00000550325 DDX23Q9BUQ8 820 aaKnown RBP13.16□□□□□ -0.3
VDR-208ENST00000550325 G3BP2Q9UN86 482 aaKnown RBP13.16□□□□□ -0.3
VDR-208ENST00000550325 PPP1R2P41236 205 aa13.16□□□□□ -0.3
VDR-208ENST00000550325 RAD23BP54727 409 aa13.16□□□□□ -0.3
VDR-208ENST00000550325 TFAP4Q01664 338 aa13.16□□□□□ -0.3
VDR-208ENST00000550325 C11orf91Q3C1V1 193 aa13.16□□□□□ -0.3
VDR-208ENST00000550325 SCFD2Q8WU76 684 aa13.16□□□□□ -0.3
VDR-208ENST00000550325 DDX12PQ92771 950 aa13.16□□□□□ -0.3
VDR-208ENST00000550325 GJA10Q969M2 543 aa13.16□□□□□ -0.3
VDR-208ENST00000550325 RAB17Q9H0T7 212 aa13.16□□□□□ -0.3
VDR-208ENST00000550325 GSTA1P08263 222 aa13.15□□□□□ -0.3
VDR-208ENST00000550325 ATP4AP20648 1035 aa13.15□□□□□ -0.3
VDR-208ENST00000550325 IGHMBP2P38935 993 aaKnown RBP13.15□□□□□ -0.3
VDR-208ENST00000550325 PDE6CP51160 858 aa13.15□□□□□ -0.3
VDR-208ENST00000550325 EIF3BP55884 814 aaKnown RBP13.15□□□□□ -0.3
VDR-208ENST00000550325 COPS2P61201 443 aa13.15□□□□□ -0.3
VDR-208ENST00000550325 UBAP2Q5T6F2 1119 aaKnown RBP13.15□□□□□ -0.3
VDR-208ENST00000550325 TMED8Q6PL24 325 aaPredicted RBP13.15□□□□□ -0.3
VDR-208ENST00000550325 LMNTD2Q8IXW0 634 aa13.15□□□□□ -0.3
VDR-208ENST00000550325 PNMA1Q8ND90 353 aa13.15□□□□□ -0.3
VDR-208ENST00000550325 ZCRB1Q8TBF4 217 aaKnown RBP13.15□□□□□ -0.3
VDR-208ENST00000550325 FBXO25Q8TCJ0 367 aa13.15□□□□□ -0.3
VDR-208ENST00000550325 ACSBG1Q96GR2 724 aa13.15□□□□□ -0.3
VDR-208ENST00000550325 NAF1Q96HR8 494 aaKnown RBP13.15□□□□□ -0.3
VDR-208ENST00000550325 ZNF317Q96PQ6 595 aaPredicted RBP13.15□□□□□ -0.3
VDR-208ENST00000550325 SEMA4AQ9H3S1 761 aa13.15□□□□□ -0.3
VDR-208ENST00000550325 USP15Q9Y4E8 981 aaPredicted RBP13.15□□□□□ -0.3
VDR-208ENST00000550325 ATRNO75882 1429 aa13.15□□□□□ -0.3
VDR-208ENST00000550325 ARFGEF2Q9Y6D5 1785 aa13.15□□□□□ -0.3
VDR-208ENST00000550325 PDE8AO60658 829 aa13.15□□□□□ -0.3
VDR-208ENST00000550325 LUC7L3O95232 432 aaKnown RBP13.15□□□□□ -0.3
VDR-208ENST00000550325 RARAP10276 462 aa13.15□□□□□ -0.3
VDR-208ENST00000550325 ITIH4Q14624 930 aa13.15□□□□□ -0.3
VDR-208ENST00000550325 CDCA2Q69YH5 1023 aaPredicted RBP13.15□□□□□ -0.3
VDR-208ENST00000550325 ZNF512BQ96KM6 892 aaPredicted RBP13.15□□□□□ -0.3
VDR-208ENST00000550325 MKNK2Q9HBH9 465 aa13.15□□□□□ -0.3
VDR-208ENST00000550325 PAPOLBQ9NRJ5 636 aaKnown RBP13.15□□□□□ -0.3
VDR-208ENST00000550325 SLC5A4Q9NY91 659 aa13.15□□□□□ -0.3
VDR-208ENST00000550325 TBK1Q9UHD2 729 aa13.15□□□□□ -0.3
VDR-208ENST00000550325 AMFRQ9UKV5 643 aa13.15□□□□□ -0.3
VDR-208ENST00000550325 PNPLA7Q6ZV29 1317 aa13.15□□□□□ -0.3
VDR-208ENST00000550325 RASGRF2O14827 1237 aa13.15□□□□□ -0.3
VDR-208ENST00000550325 ASAP2O43150 1006 aa13.15□□□□□ -0.3
VDR-208ENST00000550325 TOM1O60784 492 aa13.15□□□□□ -0.3
VDR-208ENST00000550325 ACSL3O95573 720 aa13.15□□□□□ -0.3
VDR-208ENST00000550325 PAEPP09466 180 aa13.15□□□□□ -0.3
VDR-208ENST00000550325 FKBP3Q00688 224 aaKnown RBP13.15□□□□□ -0.3
VDR-208ENST00000550325 NUCKS1Q9H1E3 243 aaKnown RBP13.15□□□□□ -0.3
VDR-208ENST00000550325 MCM9Q9NXL9 1143 aa13.15□□□□□ -0.3
VDR-208ENST00000550325 DPPA5A6NC42 116 aa13.14□□□□□ -0.31
VDR-208ENST00000550325 WTIPA6NIX2 430 aaPredicted RBP13.14□□□□□ -0.31
VDR-208ENST00000550325 CCDC188H7C350 402 aa13.14□□□□□ -0.31
VDR-208ENST00000550325 NOL4O94818 638 aa13.14□□□□□ -0.31
VDR-208ENST00000550325 H2AFZP0C0S5 128 aa13.14□□□□□ -0.31
VDR-208ENST00000550325 SLC9A1P19634 815 aa13.14□□□□□ -0.31
VDR-208ENST00000550325 NONOQ15233 471 aaKnown RBP eCLIP13.14□□□□□ -0.31
VDR-208ENST00000550325 LONRF1Q17RB8 773 aa13.14□□□□□ -0.31
VDR-208ENST00000550325 ZNF449Q6P9G9 518 aa13.14□□□□□ -0.31
VDR-208ENST00000550325 H2AFVQ71UI9 128 aa13.14□□□□□ -0.31
VDR-208ENST00000550325 ZNF571Q7Z3V5 609 aaPredicted RBP13.14□□□□□ -0.31
VDR-208ENST00000550325 VPS36Q86VN1 386 aa13.14□□□□□ -0.31
VDR-208ENST00000550325 SPEF2Q9C093 1822 aa13.14□□□□□ -0.31
VDR-208ENST00000550325 STXBP3O00186 592 aa13.14□□□□□ -0.31
VDR-208ENST00000550325 PECAM1P16284 738 aaPredicted RBP13.14□□□□□ -0.31
VDR-208ENST00000550325 GBP1P32455 592 aa13.14□□□□□ -0.31
VDR-208ENST00000550325 SSR1P43307 286 aaKnown RBP13.14□□□□□ -0.31
VDR-208ENST00000550325 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.14□□□□□ -0.31
VDR-208ENST00000550325 TRIM7Q9C029 511 aa13.14□□□□□ -0.31
VDR-208ENST00000550325 CUEDC2Q9H467 287 aa13.14□□□□□ -0.31
VDR-208ENST00000550325 TMOD4Q9NZQ9 345 aa13.14□□□□□ -0.31
VDR-208ENST00000550325 CORO1CQ9ULV4 474 aaPredicted RBP13.14□□□□□ -0.31
VDR-208ENST00000550325 NID2Q14112 1375 aa13.14□□□□□ -0.31
VDR-208ENST00000550325 MROH5Q6ZUA9 1318 aa13.14□□□□□ -0.31
VDR-208ENST00000550325 SMCO2A6NFE2 343 aa13.14□□□□□ -0.31
VDR-208ENST00000550325 LINGO3P0C6S8 592 aa13.14□□□□□ -0.31
VDR-208ENST00000550325 PAPOLAP51003 745 aaKnown RBP13.14□□□□□ -0.31
VDR-208ENST00000550325 HERC4Q5GLZ8 1057 aaPredicted RBP13.14□□□□□ -0.31
VDR-208ENST00000550325 UNC13DQ70J99 1090 aa13.14□□□□□ -0.31
VDR-208ENST00000550325 INTS8Q75QN2 995 aaKnown RBP13.14□□□□□ -0.31
VDR-208ENST00000550325 ACTRT1Q8TDG2 376 aa13.14□□□□□ -0.31
VDR-208ENST00000550325 TMOD3Q9NYL9 352 aa13.14□□□□□ -0.31
VDR-208ENST00000550325 MYH7BA7E2Y1 1941 aa13.14□□□□□ -0.31
VDR-208ENST00000550325 PLCG2P16885 1265 aa13.13□□□□□ -0.31
VDR-208ENST00000550325 ABL2P42684 1182 aa13.13□□□□□ -0.31
VDR-208ENST00000550325 LRRC63Q05C16 580 aa13.13□□□□□ -0.31
VDR-208ENST00000550325 ADAM9Q13443 819 aa13.13□□□□□ -0.31
VDR-208ENST00000550325 ZNF268Q14587 947 aaPredicted RBP13.13□□□□□ -0.31
VDR-208ENST00000550325 SLMAPQ14BN4 828 aa13.13□□□□□ -0.31
VDR-208ENST00000550325 TMEM266Q2M3C6 531 aa13.13□□□□□ -0.31
VDR-208ENST00000550325 TBCKQ8TEA7 893 aa13.13□□□□□ -0.31
VDR-208ENST00000550325 TEKT4Q8WW24 435 aa13.13□□□□□ -0.31
VDR-208ENST00000550325 OSGEPQ9NPF4 335 aa13.13□□□□□ -0.31
VDR-208ENST00000550325 ADAM22Q9P0K1 906 aa13.13□□□□□ -0.31
VDR-208ENST00000550325 AFF2P51816 1311 aa13.13□□□□□ -0.31
VDR-208ENST00000550325 KLHL33A6NCF5 533 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms