RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 WNT8BQ93098 351 aa29.23■■■□□ 2.27
CPSF6-205ENST00000550075 TRAPPC10P48553 1259 aa29.22■■■□□ 2.27
CPSF6-205ENST00000550075 FXR1P51114 621 aaKnown RBP eCLIP29.22■■■□□ 2.27
CPSF6-205ENST00000550075 ZNF484Q5JVG2 852 aa29.22■■■□□ 2.27
CPSF6-205ENST00000550075 ZNF618Q5T7W0 954 aa29.22■■■□□ 2.27
CPSF6-205ENST00000550075 C16orf59Q7L2K0 433 aa29.22■■■□□ 2.27
CPSF6-205ENST00000550075 FTOQ9C0B1 505 aaKnown RBP eCLIP29.22■■■□□ 2.27
CPSF6-205ENST00000550075 CEP131Q9UPN4 1083 aa29.22■■■□□ 2.27
CPSF6-205ENST00000550075 RSPH10B2B2RC85 870 aa29.21■■■□□ 2.27
CPSF6-205ENST00000550075 RSPH10BP0C881 870 aa29.21■■■□□ 2.27
CPSF6-205ENST00000550075 ATP2B1P20020 1258 aa29.21■■■□□ 2.27
CPSF6-205ENST00000550075 U2AF2P26368 475 aaKnown RBP eCLIP29.21■■■□□ 2.276e-8■■■□□ 18.6
CPSF6-205ENST00000550075 HAS1Q92839 578 aa29.21■■■□□ 2.27
CPSF6-205ENST00000550075 VAV3Q9UKW4 847 aa29.21■■■□□ 2.27
CPSF6-205ENST00000550075 K7ELQ4 463 aaPredicted RBP29.2■■■□□ 2.26
CPSF6-205ENST00000550075 PRKCEQ02156 737 aa29.2■■■□□ 2.26
CPSF6-205ENST00000550075 MARCH8Q5T0T0 291 aa29.2■■■□□ 2.26
CPSF6-205ENST00000550075 MCTP1Q6DN14 999 aa29.2■■■□□ 2.26
CPSF6-205ENST00000550075 RPAINQ86UA6 219 aa29.2■■■□□ 2.26
CPSF6-205ENST00000550075 HERVK_113Q902F9 699 aa29.2■■■□□ 2.26
CPSF6-205ENST00000550075 DKC1O60832 514 aaKnown RBP eCLIP29.19■■■□□ 2.26
CPSF6-205ENST00000550075 OATP04181 439 aa29.19■■■□□ 2.26
CPSF6-205ENST00000550075 MCM7P33993 719 aa29.19■■■□□ 2.26
CPSF6-205ENST00000550075 NRBP2Q9NSY0 501 aa29.19■■■□□ 2.26
CPSF6-205ENST00000550075 KIF28PB7ZC32 967 aa29.18■■■□□ 2.26
CPSF6-205ENST00000550075 CTSHP09668 335 aa29.18■■■□□ 2.26
CPSF6-205ENST00000550075 TTC38Q5R3I4 469 aa29.18■■■□□ 2.26
CPSF6-205ENST00000550075 RUFY4Q6ZNE9 571 aa29.18■■■□□ 2.26
CPSF6-205ENST00000550075 TRAPPC12Q8WVT3 735 aa29.18■■■□□ 2.26
CPSF6-205ENST00000550075 PCDHA2Q9Y5H9 948 aa29.18■■■□□ 2.26
CPSF6-205ENST00000550075 ATP4AP20648 1035 aa29.17■■■□□ 2.26
CPSF6-205ENST00000550075 PDCP20941 246 aa29.17■■■□□ 2.26
CPSF6-205ENST00000550075 LARP1BQ659C4 914 aaKnown RBP29.17■■■□□ 2.26
CPSF6-205ENST00000550075 NCAPH2Q6IBW4 605 aa29.17■■■□□ 2.26
CPSF6-205ENST00000550075 TRAF7Q6Q0C0 670 aa29.17■■■□□ 2.26
CPSF6-205ENST00000550075 OTOP2Q7RTS6 562 aa29.17■■■□□ 2.26
CPSF6-205ENST00000550075 SNX21Q969T3 373 aa29.17■■■□□ 2.26
CPSF6-205ENST00000550075 INTS4Q96HW7 963 aaKnown RBP29.17■■■□□ 2.26
CPSF6-205ENST00000550075 PCDHA12Q9UN75 941 aa29.17■■■□□ 2.26
CPSF6-205ENST00000550075 ZBBXA8MT70 800 aa29.16■■■□□ 2.26
CPSF6-205ENST00000550075 WNT7AO00755 349 aa29.16■■■□□ 2.26
CPSF6-205ENST00000550075 ZNF862O60290 1169 aa29.16■■■□□ 2.26
CPSF6-205ENST00000550075 CXCL10P02778 98 aa29.16■■■□□ 2.26
CPSF6-205ENST00000550075 PSMC5P62195 406 aa29.16■■■□□ 2.26
CPSF6-205ENST00000550075 UGCGQ16739 394 aa29.16■■■□□ 2.26
CPSF6-205ENST00000550075 XKR3Q5GH77 459 aa29.16■■■□□ 2.26
CPSF6-205ENST00000550075 RASIP1Q5U651 963 aa29.16■■■□□ 2.26
CPSF6-205ENST00000550075 MTHFD1LQ6UB35 978 aa29.16■■■□□ 2.26
CPSF6-205ENST00000550075 TRMT1LQ7Z2T5 733 aaKnown RBP29.16■■■□□ 2.26
CPSF6-205ENST00000550075 HSCBQ8IWL3 235 aa29.16■■■□□ 2.26
CPSF6-205ENST00000550075 FAM49AQ9H0Q0 323 aaPredicted RBP29.16■■■□□ 2.26
CPSF6-205ENST00000550075 SMIM35A0A1B0GVV1 85 aa29.15■■■□□ 2.26
CPSF6-205ENST00000550075 M0QZ92 97 aa29.15■■■□□ 2.26
CPSF6-205ENST00000550075 SOX1O00570 391 aaPredicted RBP29.15■■■□□ 2.26
CPSF6-205ENST00000550075 BAIAP3O94812 1187 aa29.15■■■□□ 2.26
CPSF6-205ENST00000550075 KLRC1P26715 233 aa29.15■■■□□ 2.26
CPSF6-205ENST00000550075 EPHA7Q15375 998 aa29.15■■■□□ 2.26
CPSF6-205ENST00000550075 FAM26DQ5JW98 314 aa29.15■■■□□ 2.26
CPSF6-205ENST00000550075 CNKSR3Q6P9H4 555 aa29.15■■■□□ 2.26
CPSF6-205ENST00000550075 DNAJB3Q8WWF6 145 aa29.15■■■□□ 2.26
CPSF6-205ENST00000550075 TTC12Q9H892 705 aaPredicted RBP29.15■■■□□ 2.26
CPSF6-205ENST00000550075 TET1Q8NFU7 2136 aa29.14■■■□□ 2.26
CPSF6-205ENST00000550075 EML1O00423 815 aa29.14■■■□□ 2.26
CPSF6-205ENST00000550075 NBNO60934 754 aa29.14■■■□□ 2.26
CPSF6-205ENST00000550075 P4HBP07237 508 aaKnown RBP29.14■■■□□ 2.26
CPSF6-205ENST00000550075 TXKP42681 527 aa29.14■■■□□ 2.26
CPSF6-205ENST00000550075 QARSP47897 775 aaKnown RBP29.14■■■□□ 2.26
CPSF6-205ENST00000550075 MRPS6P82932 125 aaKnown RBP29.14■■■□□ 2.26
CPSF6-205ENST00000550075 SMAD3P84022 425 aaKnown RBP29.14■■■□□ 2.26
CPSF6-205ENST00000550075 IER5Q5VY09 327 aa29.14■■■□□ 2.26
CPSF6-205ENST00000550075 BANK1Q8NDB2 785 aa29.14■■■□□ 2.26
CPSF6-205ENST00000550075 VWCEQ96DN2 955 aa29.14■■■□□ 2.26
CPSF6-205ENST00000550075 MTMR9Q96QG7 549 aa29.14■■■□□ 2.26
CPSF6-205ENST00000550075 SEPT9Q9UHD8 586 aaPredicted RBP29.14■■■□□ 2.26
CPSF6-205ENST00000550075 SLC4A7Q9Y6M7 1214 aa29.14■■■□□ 2.26
CPSF6-205ENST00000550075 HSFX4A0A1B0GTS1 333 aaPredicted RBP29.13■■■□□ 2.25
CPSF6-205ENST00000550075 HSFX3A0A1B0GWH4 333 aaPredicted RBP29.13■■■□□ 2.25
CPSF6-205ENST00000550075 ZBTB42B2RXF5 422 aa29.13■■■□□ 2.25
CPSF6-205ENST00000550075 MAGEB2O15479 319 aa29.13■■■□□ 2.25
CPSF6-205ENST00000550075 EFCAB14O75071 495 aa29.13■■■□□ 2.25
CPSF6-205ENST00000550075 OR52Z1P0C646 297 aa29.13■■■□□ 2.25
CPSF6-205ENST00000550075 SPIRE1Q08AE8 756 aa29.13■■■□□ 2.25
CPSF6-205ENST00000550075 MBTPS1Q14703 1052 aa29.13■■■□□ 2.25
CPSF6-205ENST00000550075 ZNF174Q15697 407 aa29.13■■■□□ 2.25
CPSF6-205ENST00000550075 GPR153Q6NV75 609 aa29.13■■■□□ 2.25
CPSF6-205ENST00000550075 NME8Q8N427 588 aa29.13■■■□□ 2.25
CPSF6-205ENST00000550075 NEK9Q8TD19 979 aa29.13■■■□□ 2.25
CPSF6-205ENST00000550075 C22orf31O95567 290 aa29.12■■■□□ 2.25
CPSF6-205ENST00000550075 RILPL1Q5EBL4 403 aa29.12■■■□□ 2.25
CPSF6-205ENST00000550075 LRCH3Q96II8 777 aa29.12■■■□□ 2.25
CPSF6-205ENST00000550075 TMEM60Q9H2L4 133 aa29.12■■■□□ 2.25
CPSF6-205ENST00000550075 KCNJ6P48051 423 aa29.11■■■□□ 2.25
CPSF6-205ENST00000550075 GPNMBQ14956 572 aa29.11■■■□□ 2.25
CPSF6-205ENST00000550075 TMEM266Q2M3C6 531 aa29.11■■■□□ 2.25
CPSF6-205ENST00000550075 SEPT8Q92599 483 aa29.11■■■□□ 2.25
CPSF6-205ENST00000550075 ZBTB10Q96DT7 871 aa29.11■■■□□ 2.25
CPSF6-205ENST00000550075 LXNQ9BS40 222 aa29.11■■■□□ 2.25
CPSF6-205ENST00000550075 CXXC1Q9P0U4 656 aaPredicted RBP29.11■■■□□ 2.25
CPSF6-205ENST00000550075 CDY2AQ9Y6F7 541 aa29.11■■■□□ 2.25
CPSF6-205ENST00000550075 LAMA3Q16787 3333 aa29.1■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms