RNA–Protein interactions for RNA: ENST00000550070.6

ERBB3-214, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,729 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-214ENST00000550070 ITGB3BPQ13352 177 aaPredicted RBP11.26□□□□□ -0.61
ERBB3-214ENST00000550070 PTPROQ16827 1216 aa11.26□□□□□ -0.61
ERBB3-214ENST00000550070 KCTD19Q17RG1 926 aaPredicted RBP11.26□□□□□ -0.61
ERBB3-214ENST00000550070 NAA35Q5VZE5 725 aa11.26□□□□□ -0.61
ERBB3-214ENST00000550070 TTBK2Q6IQ55 1244 aa11.26□□□□□ -0.61
ERBB3-214ENST00000550070 ZNF571Q7Z3V5 609 aaPredicted RBP11.26□□□□□ -0.61
ERBB3-214ENST00000550070 IRF2BP2Q7Z5L9 587 aa11.26□□□□□ -0.61
ERBB3-214ENST00000550070 RPAINQ86UA6 219 aa11.26□□□□□ -0.61
ERBB3-214ENST00000550070 CCDC65Q8IXS2 484 aa11.26□□□□□ -0.61
ERBB3-214ENST00000550070 TAF1DQ9H5J8 278 aaPredicted RBP11.26□□□□□ -0.61
ERBB3-214ENST00000550070 POTEB3A0JP26 581 aa11.26□□□□□ -0.61
ERBB3-214ENST00000550070 POTECB2RU33 542 aa11.26□□□□□ -0.61
ERBB3-214ENST00000550070 PPP1R37O75864 691 aa11.26□□□□□ -0.61
ERBB3-214ENST00000550070 AKR1B1P15121 316 aa11.26□□□□□ -0.61
ERBB3-214ENST00000550070 SLC9A1P19634 815 aa11.26□□□□□ -0.61
ERBB3-214ENST00000550070 GUCY2CP25092 1073 aa11.26□□□□□ -0.61
ERBB3-214ENST00000550070 HNRNPH1P31943 449 aaKnown RBP11.26□□□□□ -0.61
ERBB3-214ENST00000550070 MCCD1P59942 119 aaPredicted RBP11.26□□□□□ -0.61
ERBB3-214ENST00000550070 TNNC1P63316 161 aa11.26□□□□□ -0.61
ERBB3-214ENST00000550070 GPSM2P81274 684 aa11.26□□□□□ -0.61
ERBB3-214ENST00000550070 MKRN3Q13064 507 aaKnown RBP11.26□□□□□ -0.61
ERBB3-214ENST00000550070 RPS6KA1Q15418 735 aa11.26□□□□□ -0.61
ERBB3-214ENST00000550070 PTGISQ16647 500 aa11.26□□□□□ -0.61
ERBB3-214ENST00000550070 CEP85LQ5SZL2 805 aa11.26□□□□□ -0.61
ERBB3-214ENST00000550070 POTEBQ6S5H4 581 aa11.26□□□□□ -0.61
ERBB3-214ENST00000550070 MAATS1Q7Z4T9 603 aa11.26□□□□□ -0.61
ERBB3-214ENST00000550070 GPBP1Q86WP2 473 aa11.26□□□□□ -0.61
ERBB3-214ENST00000550070 ZC3H3Q8IXZ2 948 aaKnown RBP11.26□□□□□ -0.61
ERBB3-214ENST00000550070 MORC4Q8TE76 937 aa11.26□□□□□ -0.61
ERBB3-214ENST00000550070 SCFD2Q8WU76 684 aa11.26□□□□□ -0.61
ERBB3-214ENST00000550070 NT5C3AQ9H0P0 336 aa11.26□□□□□ -0.61
ERBB3-214ENST00000550070 ISCUQ9H1K1 167 aa11.26□□□□□ -0.61
ERBB3-214ENST00000550070 CYP11B2P19099 503 aa11.25□□□□□ -0.61
ERBB3-214ENST00000550070 MDH1P40925 334 aaKnown RBP11.25□□□□□ -0.61
ERBB3-214ENST00000550070 ARSHQ5FYA8 562 aa11.25□□□□□ -0.61
ERBB3-214ENST00000550070 KCNV1Q6PIU1 500 aa11.25□□□□□ -0.61
ERBB3-214ENST00000550070 DDX42Q86XP3 938 aaKnown RBP eCLIP11.25□□□□□ -0.61
ERBB3-214ENST00000550070 C1orf131Q8NDD1 294 aaKnown RBP11.25□□□□□ -0.61
ERBB3-214ENST00000550070 ZNF473Q8WTR7 871 aaKnown RBP11.25□□□□□ -0.61
ERBB3-214ENST00000550070 TAF4BQ92750 862 aa11.25□□□□□ -0.61
ERBB3-214ENST00000550070 TMBIM4Q9HC24 238 aa11.25□□□□□ -0.61
ERBB3-214ENST00000550070 BTNL10A8MVZ5 291 aa11.25□□□□□ -0.61
ERBB3-214ENST00000550070 MEFVO15553 781 aaPredicted RBP11.25□□□□□ -0.61
ERBB3-214ENST00000550070 ZBTB48P10074 688 aaPredicted RBP11.25□□□□□ -0.61
ERBB3-214ENST00000550070 PLCG2P16885 1265 aa11.25□□□□□ -0.61
ERBB3-214ENST00000550070 SLC16A2P36021 539 aa11.25□□□□□ -0.61
ERBB3-214ENST00000550070 EPS15P42566 896 aa11.25□□□□□ -0.61
ERBB3-214ENST00000550070 FNTAP49354 379 aa11.25□□□□□ -0.61
ERBB3-214ENST00000550070 USP11P51784 963 aa11.25□□□□□ -0.61
ERBB3-214ENST00000550070 CASP5P51878 434 aa11.25□□□□□ -0.61
ERBB3-214ENST00000550070 HLTFQ14527 1009 aaKnown RBP eCLIP11.25□□□□□ -0.61
ERBB3-214ENST00000550070 UAP1Q16222 522 aaPredicted RBP11.25□□□□□ -0.61
ERBB3-214ENST00000550070 RC3H1Q5TC82 1133 aaKnown RBP11.25□□□□□ -0.61
ERBB3-214ENST00000550070 DPP8Q6V1X1 898 aaPredicted RBP11.25□□□□□ -0.61
ERBB3-214ENST00000550070 BARGINQ6ZT62 677 aa11.25□□□□□ -0.61
ERBB3-214ENST00000550070 C15orf52Q6ZUT6 534 aaKnown RBP11.25□□□□□ -0.61
ERBB3-214ENST00000550070 OR2W6PQ8NHA6 318 aa11.25□□□□□ -0.61
ERBB3-214ENST00000550070 GJD4Q96KN9 370 aaPredicted RBP11.25□□□□□ -0.61
ERBB3-214ENST00000550070 AP1M1Q9BXS5 423 aa11.25□□□□□ -0.61
ERBB3-214ENST00000550070 NEUROG2Q9H2A3 272 aa11.25□□□□□ -0.61
ERBB3-214ENST00000550070 CAPN7Q9Y6W3 813 aa11.25□□□□□ -0.61
ERBB3-214ENST00000550070 ATXN2Q99700 1313 aaKnown RBP11.25□□□□□ -0.61
ERBB3-214ENST00000550070 KDM3AQ9Y4C1 1321 aa11.25□□□□□ -0.61
ERBB3-214ENST00000550070 IGKV6D-41A0A0C4DH26 115 aa11.24□□□□□ -0.61
ERBB3-214ENST00000550070 HMGB1P1B2RPK0 211 aaPredicted RBP11.24□□□□□ -0.61
ERBB3-214ENST00000550070 H0YGN5 161 aa11.24□□□□□ -0.61
ERBB3-214ENST00000550070 CES2O00748 559 aa11.24□□□□□ -0.61
ERBB3-214ENST00000550070 CEP104O60308 925 aa11.24□□□□□ -0.61
ERBB3-214ENST00000550070 HSD17B3P37058 310 aa11.24□□□□□ -0.61
ERBB3-214ENST00000550070 PPARDQ03181 441 aa11.24□□□□□ -0.61
ERBB3-214ENST00000550070 ZNF543Q08ER8 600 aa11.24□□□□□ -0.61
ERBB3-214ENST00000550070 VPS72Q15906 364 aa11.24□□□□□ -0.61
ERBB3-214ENST00000550070 LRRC57Q8N9N7 239 aa11.24□□□□□ -0.61
ERBB3-214ENST00000550070 MYCBPAPQ8TBZ2 947 aa11.24□□□□□ -0.61
ERBB3-214ENST00000550070 CUL5Q93034 780 aa11.24□□□□□ -0.61
ERBB3-214ENST00000550070 FAM163AQ96GL9 167 aaPredicted RBP11.24□□□□□ -0.61
ERBB3-214ENST00000550070 CCT8L2Q96SF2 557 aa11.24□□□□□ -0.61
ERBB3-214ENST00000550070 ZHX3Q9H4I2 956 aa11.24□□□□□ -0.61
ERBB3-214ENST00000550070 PLCB1Q9NQ66 1216 aa11.24□□□□□ -0.61
ERBB3-214ENST00000550070 IGSF5Q9NSI5 407 aa11.24□□□□□ -0.61
ERBB3-214ENST00000550070 RGS17Q9UGC6 210 aaPredicted RBP11.24□□□□□ -0.61
ERBB3-214ENST00000550070 HDAC9Q9UKV0 1011 aa11.24□□□□□ -0.61
ERBB3-214ENST00000550070 NFS1Q9Y697 457 aa11.24□□□□□ -0.61
ERBB3-214ENST00000550070 SPATA31A6Q5VVP1 1343 aa11.24□□□□□ -0.61
ERBB3-214ENST00000550070 PLIN4Q96Q06 1357 aa11.24□□□□□ -0.61
ERBB3-214ENST00000550070 BHMG1C9JSJ3 638 aaPredicted RBP11.24□□□□□ -0.61
ERBB3-214ENST00000550070 CETN3O15182 167 aa11.24□□□□□ -0.61
ERBB3-214ENST00000550070 MED24O75448 989 aa11.24□□□□□ -0.61
ERBB3-214ENST00000550070 UCHL3P15374 230 aa11.24□□□□□ -0.61
ERBB3-214ENST00000550070 NAT1P18440 290 aa11.24□□□□□ -0.61
ERBB3-214ENST00000550070 NR2F2P24468 414 aa11.24□□□□□ -0.61
ERBB3-214ENST00000550070 HPDP32754 393 aaPredicted RBP11.24□□□□□ -0.61
ERBB3-214ENST00000550070 STAT3P40763 770 aa11.24□□□□□ -0.61
ERBB3-214ENST00000550070 HDLBPQ00341 1268 aaKnown RBP11.24□□□□□ -0.61
ERBB3-214ENST00000550070 GABPAQ06546 454 aa11.24□□□□□ -0.61
ERBB3-214ENST00000550070 PICALMQ13492 652 aa11.24□□□□□ -0.61
ERBB3-214ENST00000550070 MFSD14BQ5SR56 506 aa11.24□□□□□ -0.61
ERBB3-214ENST00000550070 PPP1R18Q6NYC8 613 aa11.24□□□□□ -0.61
ERBB3-214ENST00000550070 NLRP14Q86W24 1093 aa11.24□□□□□ -0.61
ERBB3-214ENST00000550070 SEPT12Q8IYM1 358 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms