RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 SYMPKQ92797 1274 aaKnown RBP18.55■□□□□ 0.56
VPS29-207ENST00000549970 TOP1MTQ969P6 601 aa18.55■□□□□ 0.56
VPS29-207ENST00000549970 YME1L1Q96TA2 773 aa18.55■□□□□ 0.56
VPS29-207ENST00000549970 PDRG1Q9NUG6 133 aa18.55■□□□□ 0.56
VPS29-207ENST00000549970 IGKV6D-21A0A0A0MT36 114 aa18.54■□□□□ 0.56
VPS29-207ENST00000549970 SLC26A2P50443 739 aa18.54■□□□□ 0.56
VPS29-207ENST00000549970 FBXO47Q5MNV8 452 aa18.54■□□□□ 0.56
VPS29-207ENST00000549970 MIS18BP1Q6P0N0 1132 aa18.54■□□□□ 0.56
VPS29-207ENST00000549970 PDXDC2PQ6P474 469 aa18.54■□□□□ 0.56
VPS29-207ENST00000549970 ZNF274Q96GC6 653 aaPredicted RBP18.54■□□□□ 0.56
VPS29-207ENST00000549970 C17orf80Q9BSJ5 609 aa18.54■□□□□ 0.56
VPS29-207ENST00000549970 SUGCTQ9HAC7 445 aa18.54■□□□□ 0.56
VPS29-207ENST00000549970 ZNF302Q9NR11 478 aa18.54■□□□□ 0.56
VPS29-207ENST00000549970 PCDHA2Q9Y5H9 948 aa18.54■□□□□ 0.56
VPS29-207ENST00000549970 MUC3AQ02505 3323 aa18.53■□□□□ 0.56
VPS29-207ENST00000549970 M0QZ92 97 aa18.53■□□□□ 0.56
VPS29-207ENST00000549970 RPLP2P05387 115 aaKnown RBP18.53■□□□□ 0.56
VPS29-207ENST00000549970 CIITAP33076 1130 aa18.53■□□□□ 0.56
VPS29-207ENST00000549970 MRPS5P82675 430 aaKnown RBP18.53■□□□□ 0.56
VPS29-207ENST00000549970 IER5Q5VY09 327 aa18.53■□□□□ 0.56
VPS29-207ENST00000549970 SWSAP1Q6NVH7 229 aa18.53■□□□□ 0.56
VPS29-207ENST00000549970 TSHZ1Q6ZSZ6 1077 aa18.53■□□□□ 0.56
VPS29-207ENST00000549970 ASB2Q96Q27 587 aa18.53■□□□□ 0.56
VPS29-207ENST00000549970 SH3GLB2Q9NR46 395 aa18.53■□□□□ 0.56
VPS29-207ENST00000549970 TBC1D22BQ9NU19 505 aa18.53■□□□□ 0.56
VPS29-207ENST00000549970 TCEAL9Q9UHQ7 104 aa18.53■□□□□ 0.56
VPS29-207ENST00000549970 TRPV2Q9Y5S1 764 aa18.53■□□□□ 0.56
VPS29-207ENST00000549970 HBP1O60381 514 aa18.52■□□□□ 0.56
VPS29-207ENST00000549970 DEXIO95424 95 aa18.52■□□□□ 0.56
VPS29-207ENST00000549970 ZNF746Q6NUN9 644 aaPredicted RBP18.52■□□□□ 0.56
VPS29-207ENST00000549970 CPLX2Q6PUV4 134 aaKnown RBP18.52■□□□□ 0.56
VPS29-207ENST00000549970 MTHFD1LQ6UB35 978 aa18.52■□□□□ 0.56
VPS29-207ENST00000549970 CKAP2LQ8IYA6 745 aa18.52■□□□□ 0.56
VPS29-207ENST00000549970 SP7Q8TDD2 431 aaPredicted RBP18.52■□□□□ 0.56
VPS29-207ENST00000549970 ATP8B4Q8TF62 1192 aa18.52■□□□□ 0.56
VPS29-207ENST00000549970 LENG9Q96B70 501 aa18.52■□□□□ 0.56
VPS29-207ENST00000549970 AGO3Q9H9G7 860 aaKnown RBP18.52■□□□□ 0.56
VPS29-207ENST00000549970 MYH9P35579 1960 aaKnown RBP18.51■□□□□ 0.55
VPS29-207ENST00000549970 LOXHD1Q8IVV2 1947 aa18.51■□□□□ 0.55
VPS29-207ENST00000549970 SMIM35A0A1B0GVV1 85 aa18.51■□□□□ 0.55
VPS29-207ENST00000549970 EDIL3O43854 480 aa18.51■□□□□ 0.55
VPS29-207ENST00000549970 KLRC1P26715 233 aa18.51■□□□□ 0.55
VPS29-207ENST00000549970 CD52P31358 61 aa18.51■□□□□ 0.55
VPS29-207ENST00000549970 KRT76Q01546 638 aa18.51■□□□□ 0.55
VPS29-207ENST00000549970 TFF2Q03403 129 aa18.51■□□□□ 0.55
VPS29-207ENST00000549970 TRMT1LQ7Z2T5 733 aaKnown RBP18.51■□□□□ 0.55
VPS29-207ENST00000549970 SMAP1Q8IYB5 467 aaPredicted RBP18.51■□□□□ 0.55
VPS29-207ENST00000549970 IL27Q8NEV9 243 aa18.51■□□□□ 0.55
VPS29-207ENST00000549970 FBXO22Q8NEZ5 403 aa18.51■□□□□ 0.55
VPS29-207ENST00000549970 AIFM3Q96NN9 605 aa18.51■□□□□ 0.55
VPS29-207ENST00000549970 PCDHA4Q9UN74 947 aa18.51■□□□□ 0.55
VPS29-207ENST00000549970 SAMM50Q9Y512 469 aa18.51■□□□□ 0.55
VPS29-207ENST00000549970 TTC28Q96AY4 2481 aa18.5■□□□□ 0.55
VPS29-207ENST00000549970 ENPP3O14638 875 aa18.5■□□□□ 0.55
VPS29-207ENST00000549970 PSAPP07602 524 aa18.5■□□□□ 0.55
VPS29-207ENST00000549970 ATP4AP20648 1035 aa18.5■□□□□ 0.55
VPS29-207ENST00000549970 ERICH6BQ5W0A0 696 aa18.5■□□□□ 0.55
VPS29-207ENST00000549970 TBCKQ8TEA7 893 aa18.5■□□□□ 0.55
VPS29-207ENST00000549970 PCDHA10Q9Y5I2 948 aa18.5■□□□□ 0.55
VPS29-207ENST00000549970 EVPLQ92817 2033 aa18.49■□□□□ 0.55
VPS29-207ENST00000549970 MSH4O15457 936 aa18.49■□□□□ 0.55
VPS29-207ENST00000549970 USP11P51784 963 aa18.49■□□□□ 0.55
VPS29-207ENST00000549970 SCRN1Q12765 414 aa18.49■□□□□ 0.55
VPS29-207ENST00000549970 EPC2Q52LR7 807 aa18.49■□□□□ 0.55
VPS29-207ENST00000549970 ZNF484Q5JVG2 852 aa18.49■□□□□ 0.55
VPS29-207ENST00000549970 BLIDQ8IZY5 108 aa18.49■□□□□ 0.55
VPS29-207ENST00000549970 IL17RAQ96F46 866 aa18.49■□□□□ 0.55
VPS29-207ENST00000549970 CELF4Q9BZC1 486 aaKnown RBP18.49■□□□□ 0.55
VPS29-207ENST00000549970 LMCD1Q9NZU5 365 aa18.49■□□□□ 0.55
VPS29-207ENST00000549970 GABBR1Q9UBS5 961 aa18.49■□□□□ 0.55
VPS29-207ENST00000549970 GINS2Q9Y248 185 aa18.49■□□□□ 0.55
VPS29-207ENST00000549970 MAFBQ9Y5Q3 323 aaPredicted RBP18.49■□□□□ 0.55
VPS29-207ENST00000549970 SQORQ9Y6N5 450 aa18.49■□□□□ 0.55
VPS29-207ENST00000549970 COL1A2P08123 1366 aa18.49■□□□□ 0.55
VPS29-207ENST00000549970 IGSF9BQ9UPX0 1349 aa18.49■□□□□ 0.55
VPS29-207ENST00000549970 ZBTB42B2RXF5 422 aa18.48■□□□□ 0.55
VPS29-207ENST00000549970 PAK2Q13177 524 aa18.48■□□□□ 0.55
VPS29-207ENST00000549970 NME8Q8N427 588 aa18.48■□□□□ 0.55
VPS29-207ENST00000549970 ADAMTS19Q8TE59 1207 aa18.48■□□□□ 0.55
VPS29-207ENST00000549970 LINC01599Q8WXQ3 324 aa18.48■□□□□ 0.55
VPS29-207ENST00000549970 BBXQ8WY36 941 aaPredicted RBP18.48■□□□□ 0.55
VPS29-207ENST00000549970 GJA10Q969M2 543 aa18.48■□□□□ 0.55
VPS29-207ENST00000549970 SAMD11Q96NU1 681 aa18.48■□□□□ 0.55
VPS29-207ENST00000549970 C22orf23Q9BZE7 217 aa18.48■□□□□ 0.55
VPS29-207ENST00000549970 SLKQ9H2G2 1235 aaPredicted RBP18.48■□□□□ 0.55
VPS29-207ENST00000549970 TPCN1Q9ULQ1 816 aa18.48■□□□□ 0.55
VPS29-207ENST00000549970 PADI3Q9ULW8 664 aa18.48■□□□□ 0.55
VPS29-207ENST00000549970 TTC3P53804 2025 aa18.48■□□□□ 0.55
VPS29-207ENST00000549970 TCF20Q9UGU0 1960 aaKnown RBP18.48■□□□□ 0.55
VPS29-207ENST00000549970 NLRC5Q86WI3 1866 aa18.48■□□□□ 0.55
VPS29-207ENST00000549970 COL4A6Q14031 1691 aa18.47■□□□□ 0.55
VPS29-207ENST00000549970 WDR81Q562E7 1941 aa18.47■□□□□ 0.55
VPS29-207ENST00000549970 WDR64B1ANS9 1081 aa18.47■□□□□ 0.55
VPS29-207ENST00000549970 CHMP2AO43633 222 aa18.47■□□□□ 0.55
VPS29-207ENST00000549970 GAS7O60861 476 aa18.47■□□□□ 0.55
VPS29-207ENST00000549970 DTNBO60941 627 aa18.47■□□□□ 0.55
VPS29-207ENST00000549970 CDKL5O76039 1030 aa18.47■□□□□ 0.55
VPS29-207ENST00000549970 TDP2O95551 362 aa18.47■□□□□ 0.55
VPS29-207ENST00000549970 TMEM266Q2M3C6 531 aa18.47■□□□□ 0.55
VPS29-207ENST00000549970 LRCH2Q5VUJ6 765 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms