RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 CFHR4Q92496 578 aa6.64□□□□□ -1.35
CCDC38-208ENST00000549876 FAM89AQ96GI7 184 aa6.64□□□□□ -1.35
CCDC38-208ENST00000549876 OR14A2Q96R54 314 aa6.64□□□□□ -1.35
CCDC38-208ENST00000549876 TRIM8Q9BZR9 551 aa6.64□□□□□ -1.35
CCDC38-208ENST00000549876 SRPK3Q9UPE1 567 aa6.64□□□□□ -1.35
CCDC38-208ENST00000549876 NR2E1Q9Y466 385 aa6.64□□□□□ -1.35
CCDC38-208ENST00000549876 WNT9AO14904 365 aa6.63□□□□□ -1.35
CCDC38-208ENST00000549876 STK10O94804 968 aaKnown RBP6.63□□□□□ -1.35
CCDC38-208ENST00000549876 ACRV1P26436 265 aa6.63□□□□□ -1.35
CCDC38-208ENST00000549876 IFRD2Q12894 506 aaPredicted RBP6.63□□□□□ -1.35
CCDC38-208ENST00000549876 SMN1Q16637 294 aaKnown RBP6.63□□□□□ -1.35
CCDC38-208ENST00000549876 NLGN4XQ8N0W4 816 aa6.63□□□□□ -1.35
CCDC38-208ENST00000549876 ZNF669Q96BR6 464 aaPredicted RBP6.63□□□□□ -1.35
CCDC38-208ENST00000549876 CEP89Q96ST8 783 aa6.63□□□□□ -1.35
CCDC38-208ENST00000549876 ALG1Q9BT22 464 aa6.63□□□□□ -1.35
CCDC38-208ENST00000549876 TRIM55Q9BYV6 548 aa6.63□□□□□ -1.35
CCDC38-208ENST00000549876 IKZF4Q9H2S9 585 aa6.63□□□□□ -1.35
CCDC38-208ENST00000549876 MSL2Q9HCI7 577 aa6.63□□□□□ -1.35
CCDC38-208ENST00000549876 TRAV20A0A0B4J274 112 aa6.62□□□□□ -1.35
CCDC38-208ENST00000549876 ARHGAP6O43182 974 aa6.62□□□□□ -1.35
CCDC38-208ENST00000549876 INHBEP58166 350 aa6.62□□□□□ -1.35
CCDC38-208ENST00000549876 IL13RA1P78552 427 aa6.62□□□□□ -1.35
CCDC38-208ENST00000549876 WDR72Q3MJ13 1102 aa6.62□□□□□ -1.35
CCDC38-208ENST00000549876 LARP4Q71RC2 724 aaKnown RBP eCLIP6.62□□□□□ -1.35
CCDC38-208ENST00000549876 CXXC5Q7LFL8 322 aaKnown RBP6.62□□□□□ -1.35
CCDC38-208ENST00000549876 CKAP2LQ8IYA6 745 aa6.62□□□□□ -1.35
CCDC38-208ENST00000549876 LRRC47Q8N1G4 583 aaKnown RBP6.62□□□□□ -1.35
CCDC38-208ENST00000549876 ZNF808Q8N4W9 903 aaPredicted RBP6.62□□□□□ -1.35
CCDC38-208ENST00000549876 PDPK1O15530 556 aa6.61□□□□□ -1.35
CCDC38-208ENST00000549876 AMY2AP04746 511 aa6.61□□□□□ -1.35
CCDC38-208ENST00000549876 AMY2BP19961 511 aa6.61□□□□□ -1.35
CCDC38-208ENST00000549876 RPS19P39019 145 aaKnown RBP6.61□□□□□ -1.35
CCDC38-208ENST00000549876 FOXL1Q12952 345 aa6.61□□□□□ -1.35
CCDC38-208ENST00000549876 EIF4HQ15056 248 aaKnown RBP6.61□□□□□ -1.35
CCDC38-208ENST00000549876 STILQ15468 1287 aa6.61□□□□□ -1.35
CCDC38-208ENST00000549876 GPR19Q15760 415 aa6.61□□□□□ -1.35
CCDC38-208ENST00000549876 ARHGAP36Q6ZRI8 547 aa6.61□□□□□ -1.35
CCDC38-208ENST00000549876 DPH6Q7L8W6 267 aa6.61□□□□□ -1.35
CCDC38-208ENST00000549876 SPATA9Q9BWV2 254 aa6.61□□□□□ -1.35
CCDC38-208ENST00000549876 RIC8BQ9NVN3 520 aa6.61□□□□□ -1.35
CCDC38-208ENST00000549876 ARHGAP28Q9P2N2 729 aa6.61□□□□□ -1.35
CCDC38-208ENST00000549876 TRAF6Q9Y4K3 522 aa6.61□□□□□ -1.35
CCDC38-208ENST00000549876 MAN2B1O00754 1011 aa6.6□□□□□ -1.35
CCDC38-208ENST00000549876 ADCY3O60266 1144 aa6.6□□□□□ -1.35
CCDC38-208ENST00000549876 PTGS1P23219 599 aa6.6□□□□□ -1.35
CCDC38-208ENST00000549876 PAK1Q13153 545 aa6.6□□□□□ -1.35
CCDC38-208ENST00000549876 RASGRF1Q13972 1273 aa6.6□□□□□ -1.35
CCDC38-208ENST00000549876 FNDC7Q5VTL7 733 aa6.6□□□□□ -1.35
CCDC38-208ENST00000549876 WNK4Q96J92 1243 aa6.6□□□□□ -1.35
CCDC38-208ENST00000549876 PLEKHG4BQ96PX9 1271 aa6.6□□□□□ -1.35
CCDC38-208ENST00000549876 TANGO6Q9C0B7 1094 aa6.6□□□□□ -1.35
CCDC38-208ENST00000549876 KIAA1683Q9H0B3 1180 aa6.6□□□□□ -1.35
CCDC38-208ENST00000549876 CCDC113Q9H0I3 377 aa6.6□□□□□ -1.35
CCDC38-208ENST00000549876 C12orf65Q9H3J6 166 aaKnown RBP6.6□□□□□ -1.35
CCDC38-208ENST00000549876 INCENPQ9NQS7 918 aa6.6□□□□□ -1.35
CCDC38-208ENST00000549876 GALNT8Q9NY28 637 aa6.6□□□□□ -1.35
CCDC38-208ENST00000549876 BTBD7Q9P203 1132 aa6.6□□□□□ -1.35
CCDC38-208ENST00000549876 PUF60Q9UHX1 559 aaKnown RBP6.6□□□□□ -1.35
CCDC38-208ENST00000549876 FBXO10Q9UK96 956 aa6.6□□□□□ -1.35
CCDC38-208ENST00000549876 U2SURPO15042 1029 aaKnown RBP6.59□□□□□ -1.35
CCDC38-208ENST00000549876 HMGCRP04035 888 aa6.59□□□□□ -1.35
CCDC38-208ENST00000549876 ATP2B1P20020 1258 aa6.59□□□□□ -1.35
CCDC38-208ENST00000549876 AOAHP28039 575 aa6.59□□□□□ -1.35
CCDC38-208ENST00000549876 GJA4P35212 333 aa6.59□□□□□ -1.35
CCDC38-208ENST00000549876 KCNQ1P51787 676 aa6.59□□□□□ -1.35
CCDC38-208ENST00000549876 FIGNQ5HY92 759 aa6.59□□□□□ -1.35
CCDC38-208ENST00000549876 TRIM68Q6AZZ1 485 aa6.59□□□□□ -1.35
CCDC38-208ENST00000549876 USP30Q70CQ3 517 aa6.59□□□□□ -1.35
CCDC38-208ENST00000549876 ZNF703Q9H7S9 590 aaPredicted RBP6.59□□□□□ -1.35
CCDC38-208ENST00000549876 ATP23Q9Y6H3 246 aa6.59□□□□□ -1.35
CCDC38-208ENST00000549876 MPIG6BO95866 241 aa6.58□□□□□ -1.36
CCDC38-208ENST00000549876 C4BPAP04003 597 aaKnown RBP6.58□□□□□ -1.36
CCDC38-208ENST00000549876 MSX2P35548 267 aaPredicted RBP6.58□□□□□ -1.36
CCDC38-208ENST00000549876 ADCY8P40145 1251 aa6.58□□□□□ -1.36
CCDC38-208ENST00000549876 NBPF6Q5VWK0 638 aa6.58□□□□□ -1.36
CCDC38-208ENST00000549876 FOXB2Q5VYV0 432 aa6.58□□□□□ -1.36
CCDC38-208ENST00000549876 ZNF575Q86XF7 245 aa6.58□□□□□ -1.36
CCDC38-208ENST00000549876 PTRH1Q86Y79 214 aaKnown RBP6.58□□□□□ -1.36
CCDC38-208ENST00000549876 NEU4Q8WWR8 484 aaPredicted RBP6.58□□□□□ -1.36
CCDC38-208ENST00000549876 NBPF4Q96M43 638 aa6.58□□□□□ -1.36
CCDC38-208ENST00000549876 C8orf37Q96NL8 207 aa6.58□□□□□ -1.36
CCDC38-208ENST00000549876 PLA2G3Q9NZ20 509 aa6.58□□□□□ -1.36
CCDC38-208ENST00000549876 PDE6AP16499 860 aa6.57□□□□□ -1.36
CCDC38-208ENST00000549876 MC4RP32245 332 aa6.57□□□□□ -1.36
CCDC38-208ENST00000549876 INHBCP55103 352 aa6.57□□□□□ -1.36
CCDC38-208ENST00000549876 TUBA3CQ13748 450 aa6.57□□□□□ -1.36
CCDC38-208ENST00000549876 TUBA3EQ6PEY2 450 aa6.57□□□□□ -1.36
CCDC38-208ENST00000549876 OSTM1Q86WC4 334 aa6.57□□□□□ -1.36
CCDC38-208ENST00000549876 LDLRAD3Q86YD5 345 aa6.57□□□□□ -1.36
CCDC38-208ENST00000549876 SCUBE1Q8IWY4 988 aa6.57□□□□□ -1.36
CCDC38-208ENST00000549876 GPR135Q8IZ08 494 aa6.57□□□□□ -1.36
CCDC38-208ENST00000549876 PCDH19Q8TAB3 1148 aa6.57□□□□□ -1.36
CCDC38-208ENST00000549876 FBXW5Q969U6 566 aa6.57□□□□□ -1.36
CCDC38-208ENST00000549876 BTBD2Q9BX70 525 aa6.57□□□□□ -1.36
CCDC38-208ENST00000549876 AMNQ9BXJ7 453 aa6.57□□□□□ -1.36
CCDC38-208ENST00000549876 TLR9Q9NR96 1032 aa6.57□□□□□ -1.36
CCDC38-208ENST00000549876 PFDN2Q9UHV9 154 aa6.57□□□□□ -1.36
CCDC38-208ENST00000549876 CBLCQ9ULV8 474 aa6.57□□□□□ -1.36
CCDC38-208ENST00000549876 CCDC85CA6NKD9 419 aa6.56□□□□□ -1.36
CCDC38-208ENST00000549876 AQP7O14520 342 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms