RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 SLC26A2P50443 739 aa15.28■□□□□ 0.04
GCN1-206ENST00000549815 SKIV2LQ15477 1246 aaKnown RBP15.28■□□□□ 0.04
GCN1-206ENST00000549815 TSHZ1Q6ZSZ6 1077 aa15.28■□□□□ 0.04
GCN1-206ENST00000549815 CCDC60Q8IWA6 550 aaPredicted RBP15.28■□□□□ 0.04
GCN1-206ENST00000549815 REXO1Q8N1G1 1221 aaKnown RBP15.28■□□□□ 0.04
GCN1-206ENST00000549815 RASGRP4Q8TDF6 673 aa15.28■□□□□ 0.04
GCN1-206ENST00000549815 LINC01599Q8WXQ3 324 aa15.28■□□□□ 0.04
GCN1-206ENST00000549815 TNPO1Q92973 898 aaKnown RBP15.28■□□□□ 0.04
GCN1-206ENST00000549815 LENG9Q96B70 501 aa15.28■□□□□ 0.04
GCN1-206ENST00000549815 SAMD11Q96NU1 681 aa15.28■□□□□ 0.04
GCN1-206ENST00000549815 YME1L1Q96TA2 773 aa15.28■□□□□ 0.04
GCN1-206ENST00000549815 SLC26A6Q9BXS9 759 aa15.28■□□□□ 0.04
GCN1-206ENST00000549815 NCOA5Q9HCD5 579 aaKnown RBP15.28■□□□□ 0.04
GCN1-206ENST00000549815 SQORQ9Y6N5 450 aa15.28■□□□□ 0.04
GCN1-206ENST00000549815 BRWD1Q9NSI6 2320 aa15.28■□□□□ 0.04
GCN1-206ENST00000549815 WDR81Q562E7 1941 aa15.27■□□□□ 0.04
GCN1-206ENST00000549815 KDM3AQ9Y4C1 1321 aa15.27■□□□□ 0.04
GCN1-206ENST00000549815 BDP1A6H8Y1 2624 aa15.27■□□□□ 0.04
GCN1-206ENST00000549815 POTEB3A0JP26 581 aa15.27■□□□□ 0.04
GCN1-206ENST00000549815 IPO5O00410 1097 aaKnown RBP15.27■□□□□ 0.04
GCN1-206ENST00000549815 KCNQ1P51787 676 aa15.27■□□□□ 0.04
GCN1-206ENST00000549815 CCT2P78371 535 aaKnown RBP15.27■□□□□ 0.04
GCN1-206ENST00000549815 SETQ01105 290 aaPredicted RBP15.27■□□□□ 0.04
GCN1-206ENST00000549815 EPC2Q52LR7 807 aa15.27■□□□□ 0.04
GCN1-206ENST00000549815 IER5Q5VY09 327 aa15.27■□□□□ 0.04
GCN1-206ENST00000549815 POTEBQ6S5H4 581 aa15.27■□□□□ 0.04
GCN1-206ENST00000549815 MTHFD1LQ6UB35 978 aa15.27■□□□□ 0.04
GCN1-206ENST00000549815 RTN4RL1Q86UN2 441 aaPredicted RBP15.27■□□□□ 0.04
GCN1-206ENST00000549815 CRIPAKQ8N1N5 446 aa15.27■□□□□ 0.04
GCN1-206ENST00000549815 FBXO22Q8NEZ5 403 aa15.27■□□□□ 0.04
GCN1-206ENST00000549815 UHRF1Q96T88 793 aaPredicted RBP15.27■□□□□ 0.04
GCN1-206ENST00000549815 ZNF577Q9BSK1 485 aa15.27■□□□□ 0.04
GCN1-206ENST00000549815 TM6SF1Q9BZW5 370 aa15.27■□□□□ 0.04
GCN1-206ENST00000549815 FAM49AQ9H0Q0 323 aaPredicted RBP15.27■□□□□ 0.04
GCN1-206ENST00000549815 VPS54Q9P1Q0 977 aa15.27■□□□□ 0.04
GCN1-206ENST00000549815 TRPV2Q9Y5S1 764 aa15.27■□□□□ 0.04
GCN1-206ENST00000549815 ZBTB42B2RXF5 422 aa15.26■□□□□ 0.03
GCN1-206ENST00000549815 HBP1O60381 514 aa15.26■□□□□ 0.03
GCN1-206ENST00000549815 CD52P31358 61 aa15.26■□□□□ 0.03
GCN1-206ENST00000549815 ZNF746Q6NUN9 644 aaPredicted RBP15.26■□□□□ 0.03
GCN1-206ENST00000549815 CCDC148Q8NFR7 591 aa15.26■□□□□ 0.03
GCN1-206ENST00000549815 ATP8B4Q8TF62 1192 aa15.26■□□□□ 0.03
GCN1-206ENST00000549815 HLA-CQ95604 372 aa15.26■□□□□ 0.03
GCN1-206ENST00000549815 ZNF689Q96CS4 500 aaPredicted RBP15.26■□□□□ 0.03
GCN1-206ENST00000549815 UIMC1Q96RL1 719 aa15.26■□□□□ 0.03
GCN1-206ENST00000549815 ZNF302Q9NR11 478 aa15.26■□□□□ 0.03
GCN1-206ENST00000549815 SH3GLB2Q9NR46 395 aa15.26■□□□□ 0.03
GCN1-206ENST00000549815 TBC1D22BQ9NU19 505 aa15.26■□□□□ 0.03
GCN1-206ENST00000549815 MAFBQ9Y5Q3 323 aaPredicted RBP15.26■□□□□ 0.03
GCN1-206ENST00000549815 MYH9P35579 1960 aaKnown RBP15.25■□□□□ 0.03
GCN1-206ENST00000549815 COL1A2P08123 1366 aa15.25■□□□□ 0.03
GCN1-206ENST00000549815 ATG2AQ2TAZ0 1938 aa15.25■□□□□ 0.03
GCN1-206ENST00000549815 IGSF9BQ9UPX0 1349 aa15.25■□□□□ 0.03
GCN1-206ENST00000549815 H3BNC9 293 aa15.25■□□□□ 0.03
GCN1-206ENST00000549815 BACH1O14867 736 aa15.25■□□□□ 0.03
GCN1-206ENST00000549815 KLRC1P26715 233 aa15.25■□□□□ 0.03
GCN1-206ENST00000549815 AKAP17AQ02040 695 aaKnown RBP15.25■□□□□ 0.03
GCN1-206ENST00000549815 TMEM62Q0P6H9 643 aa15.25■□□□□ 0.03
GCN1-206ENST00000549815 AAK1Q2M2I8 961 aa15.25■□□□□ 0.03
GCN1-206ENST00000549815 FAM160B1Q5W0V3 765 aa15.25■□□□□ 0.03
GCN1-206ENST00000549815 SWSAP1Q6NVH7 229 aa15.25■□□□□ 0.03
GCN1-206ENST00000549815 MIS18BP1Q6P0N0 1132 aa15.25■□□□□ 0.03
GCN1-206ENST00000549815 PDXDC2PQ6P474 469 aa15.25■□□□□ 0.03
GCN1-206ENST00000549815 TMEM192Q8IY95 271 aa15.25■□□□□ 0.03
GCN1-206ENST00000549815 NME8Q8N427 588 aa15.25■□□□□ 0.03
GCN1-206ENST00000549815 BICD2Q8TD16 824 aa15.25■□□□□ 0.03
GCN1-206ENST00000549815 IL17RAQ96F46 866 aa15.25■□□□□ 0.03
GCN1-206ENST00000549815 ZNF274Q96GC6 653 aaPredicted RBP15.25■□□□□ 0.03
GCN1-206ENST00000549815 NECAB3Q96P71 396 aaPredicted RBP15.25■□□□□ 0.03
GCN1-206ENST00000549815 CELF4Q9BZC1 486 aaKnown RBP15.25■□□□□ 0.03
GCN1-206ENST00000549815 CYP46A1Q9Y6A2 500 aa15.25■□□□□ 0.03
GCN1-206ENST00000549815 EVPLQ92817 2033 aa15.25■□□□□ 0.03
GCN1-206ENST00000549815 ADGRA3Q8IWK6 1321 aa15.24■□□□□ 0.03
GCN1-206ENST00000549815 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.24■□□□□ 0.03
GCN1-206ENST00000549815 M0R2N6 131 aa15.24■□□□□ 0.03
GCN1-206ENST00000549815 PRR16Q569H4 304 aa15.24■□□□□ 0.03
GCN1-206ENST00000549815 ZNF484Q5JVG2 852 aa15.24■□□□□ 0.03
GCN1-206ENST00000549815 SMAP1Q8IYB5 467 aaPredicted RBP15.24■□□□□ 0.03
GCN1-206ENST00000549815 KIAA0319LQ8IZA0 1049 aa15.24■□□□□ 0.03
GCN1-206ENST00000549815 MRPL38Q96DV4 380 aaKnown RBP15.24■□□□□ 0.03
GCN1-206ENST00000549815 LARP6Q9BRS8 491 aaKnown RBP15.24■□□□□ 0.03
GCN1-206ENST00000549815 PADI3Q9ULW8 664 aa15.24■□□□□ 0.03
GCN1-206ENST00000549815 C5orf67F2Z3F1 127 aa15.23■□□□□ 0.03
GCN1-206ENST00000549815 MSH4O15457 936 aa15.23■□□□□ 0.03
GCN1-206ENST00000549815 DGKIO75912 1065 aa15.23■□□□□ 0.03
GCN1-206ENST00000549815 KRT76Q01546 638 aa15.23■□□□□ 0.03
GCN1-206ENST00000549815 GPM6BQ13491 265 aa15.23■□□□□ 0.03
GCN1-206ENST00000549815 NPY5RQ15761 445 aa15.23■□□□□ 0.03
GCN1-206ENST00000549815 FIBCD1Q8N539 461 aa15.23■□□□□ 0.03
GCN1-206ENST00000549815 BBXQ8WY36 941 aaPredicted RBP15.23■□□□□ 0.03
GCN1-206ENST00000549815 CLP1Q92989 425 aaKnown RBP15.23■□□□□ 0.03
GCN1-206ENST00000549815 FTHL17Q9BXU8 183 aa15.23■□□□□ 0.03
GCN1-206ENST00000549815 UPF3BQ9BZI7 483 aaKnown RBP15.23■□□□□ 0.03
GCN1-206ENST00000549815 TMX1Q9H3N1 280 aa15.23■□□□□ 0.03
GCN1-206ENST00000549815 CDHR5Q9HBB8 845 aa15.23■□□□□ 0.03
GCN1-206ENST00000549815 PCDHA4Q9UN74 947 aa15.23■□□□□ 0.03
GCN1-206ENST00000549815 PCDHA10Q9Y5I2 948 aa15.23■□□□□ 0.03
GCN1-206ENST00000549815 KIAA1671Q9BY89 1806 aa15.22■□□□□ 0.03
GCN1-206ENST00000549815 M0QZ92 97 aa15.22■□□□□ 0.03
GCN1-206ENST00000549815 DEXIO95424 95 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms