RNA–Protein interactions for RNA: ENST00000549534.1

TROAP-210, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 839 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-210ENST00000549534 SFXN1Q9H9B4 322 aa12.43□□□□□ -0.42
TROAP-210ENST00000549534 DDX41Q9UJV9 622 aaKnown RBP12.43□□□□□ -0.42
TROAP-210ENST00000549534 PNMA2Q9UL42 364 aa12.43□□□□□ -0.42
TROAP-210ENST00000549534 LRFN2Q9ULH4 789 aa12.43□□□□□ -0.42
TROAP-210ENST00000549534 MYO18BQ8IUG5 2567 aa12.43□□□□□ -0.42
TROAP-210ENST00000549534 PATJQ8NI35 1801 aa12.42□□□□□ -0.42
TROAP-210ENST00000549534 FAM170BA6NMN3 283 aa12.42□□□□□ -0.42
TROAP-210ENST00000549534 NFIBO00712 420 aa12.42□□□□□ -0.42
TROAP-210ENST00000549534 SMIM10L2AP0DMW4 78 aa12.42□□□□□ -0.42
TROAP-210ENST00000549534 SMIM10L2BP0DMW5 78 aa12.42□□□□□ -0.42
TROAP-210ENST00000549534 PPM1AP35813 382 aa12.42□□□□□ -0.42
TROAP-210ENST00000549534 G3BP1Q13283 466 aaKnown RBP eCLIP12.42□□□□□ -0.42
TROAP-210ENST00000549534 MTX1Q13505 466 aa12.42□□□□□ -0.42
TROAP-210ENST00000549534 TMC5Q6UXY8 1006 aa12.42□□□□□ -0.42
TROAP-210ENST00000549534 SLC30A10Q6XR72 485 aa12.42□□□□□ -0.42
TROAP-210ENST00000549534 C15orf39Q6ZRI6 1047 aa12.42□□□□□ -0.42
TROAP-210ENST00000549534 TSHZ1Q6ZSZ6 1077 aa12.42□□□□□ -0.42
TROAP-210ENST00000549534 SEPT14Q6ZU15 432 aa12.42□□□□□ -0.42
TROAP-210ENST00000549534 ZNF605Q86T29 641 aa12.42□□□□□ -0.42
TROAP-210ENST00000549534 CABP7Q86V35 215 aa12.42□□□□□ -0.42
TROAP-210ENST00000549534 LINC01599Q8WXQ3 324 aa12.42□□□□□ -0.42
TROAP-210ENST00000549534 DDRGK1Q96HY6 314 aa12.42□□□□□ -0.42
TROAP-210ENST00000549534 USP26Q9BXU7 913 aa12.42□□□□□ -0.42
TROAP-210ENST00000549534 RNPEPQ9H4A4 650 aa12.42□□□□□ -0.42
TROAP-210ENST00000549534 RCAN3Q9UKA8 241 aa12.42□□□□□ -0.42
TROAP-210ENST00000549534 HECTD1Q9ULT8 2610 aa12.42□□□□□ -0.42
TROAP-210ENST00000549534 ZNF462Q96JM2 2506 aa12.41□□□□□ -0.42
TROAP-210ENST00000549534 IGKV6D-41A0A0C4DH26 115 aa12.41□□□□□ -0.42
TROAP-210ENST00000549534 IPO8O15397 1037 aaKnown RBP12.41□□□□□ -0.42
TROAP-210ENST00000549534 ZNF806P0C7X5 589 aa12.41□□□□□ -0.42
TROAP-210ENST00000549534 TDGF1P13385 188 aa12.41□□□□□ -0.42
TROAP-210ENST00000549534 SCG2P13521 617 aa12.41□□□□□ -0.42
TROAP-210ENST00000549534 TROAPQ12815 778 aa12.41□□□□□ -0.42
TROAP-210ENST00000549534 UBXN2BQ14CS0 331 aa12.41□□□□□ -0.42
TROAP-210ENST00000549534 TNNI3KQ59H18 835 aa12.41□□□□□ -0.42
TROAP-210ENST00000549534 FBXO47Q5MNV8 452 aa12.41□□□□□ -0.42
TROAP-210ENST00000549534 ZBTB41Q5SVQ8 909 aa12.41□□□□□ -0.42
TROAP-210ENST00000549534 KANK3Q6NY19 840 aa12.41□□□□□ -0.42
TROAP-210ENST00000549534 RTN4RL1Q86UN2 441 aaPredicted RBP12.41□□□□□ -0.42
TROAP-210ENST00000549534 MYADMQ96S97 322 aa12.41□□□□□ -0.42
TROAP-210ENST00000549534 C16orf70Q9BSU1 422 aa12.41□□□□□ -0.42
TROAP-210ENST00000549534 IER2Q9BTL4 223 aa12.41□□□□□ -0.42
TROAP-210ENST00000549534 LTB4R2Q9NPC1 389 aa12.41□□□□□ -0.42
TROAP-210ENST00000549534 PRR12Q9ULL5 1215 aa12.41□□□□□ -0.42
TROAP-210ENST00000549534 ISY1Q9ULR0 285 aaKnown RBP12.41□□□□□ -0.42
TROAP-210ENST00000549534 SQORQ9Y6N5 450 aa12.41□□□□□ -0.42
TROAP-210ENST00000549534 FPGT-TNNI3KV9GXZ4 949 aa12.41□□□□□ -0.42
TROAP-210ENST00000549534 SPTA1P02549 2419 aa12.4□□□□□ -0.42
TROAP-210ENST00000549534 H3BRB1 525 aa12.4□□□□□ -0.42
TROAP-210ENST00000549534 TTLL1O95922 423 aa12.4□□□□□ -0.42
TROAP-210ENST00000549534 TOP3BO95985 862 aaKnown RBP12.4□□□□□ -0.42
TROAP-210ENST00000549534 NCLP19338 710 aaKnown RBP12.4□□□□□ -0.42
TROAP-210ENST00000549534 GBP2P32456 591 aaPredicted RBP12.4□□□□□ -0.42
TROAP-210ENST00000549534 SLC1A4P43007 532 aa12.4□□□□□ -0.42
TROAP-210ENST00000549534 GATMP50440 423 aa12.4□□□□□ -0.42
TROAP-210ENST00000549534 RPS6P62753 249 aaKnown RBP12.4□□□□□ -0.42
TROAP-210ENST00000549534 MGAT3Q09327 533 aa12.4□□□□□ -0.42
TROAP-210ENST00000549534 ALDH1L2Q3SY69 923 aa12.4□□□□□ -0.42
TROAP-210ENST00000549534 TAF2Q6P1X5 1199 aa12.4□□□□□ -0.42
TROAP-210ENST00000549534 LCORLQ8N3X6 602 aa12.4□□□□□ -0.42
TROAP-210ENST00000549534 MRPL50Q8N5N7 158 aaKnown RBP12.4□□□□□ -0.42
TROAP-210ENST00000549534 TUT1Q9H6E5 874 aaKnown RBP12.4□□□□□ -0.42
TROAP-210ENST00000549534 TYW1Q9NV66 732 aaKnown RBP12.4□□□□□ -0.42
TROAP-210ENST00000549534 MYH7BA7E2Y1 1941 aa12.4□□□□□ -0.42
TROAP-210ENST00000549534 GREB1LQ9C091 1923 aaPredicted RBP12.4□□□□□ -0.42
TROAP-210ENST00000549534 MYO5AQ9Y4I1 1855 aaKnown RBP12.4□□□□□ -0.42
TROAP-210ENST00000549534 TENM4Q6N022 2769 aa12.4□□□□□ -0.43
TROAP-210ENST00000549534 CYP2D7A0A087X1C5 515 aa12.39□□□□□ -0.43
TROAP-210ENST00000549534 J3QKU1 62 aa12.39□□□□□ -0.43
TROAP-210ENST00000549534 CAPNS1P04632 268 aa12.39□□□□□ -0.43
TROAP-210ENST00000549534 CEACAM1P13688 526 aa12.39□□□□□ -0.43
TROAP-210ENST00000549534 RASA1P20936 1047 aa12.39□□□□□ -0.43
TROAP-210ENST00000549534 ATP8B2P98198 1209 aa12.39□□□□□ -0.43
TROAP-210ENST00000549534 GIT2Q14161 759 aa12.39□□□□□ -0.43
TROAP-210ENST00000549534 MLF2Q15773 248 aaPredicted RBP12.39□□□□□ -0.43
TROAP-210ENST00000549534 CYP26C1Q6V0L0 522 aa12.39□□□□□ -0.43
TROAP-210ENST00000549534 RSPH3Q86UC2 560 aa12.39□□□□□ -0.43
TROAP-210ENST00000549534 PPFIBP1Q86W92 1011 aa12.39□□□□□ -0.43
TROAP-210ENST00000549534 TMEM87AQ8NBN3 555 aa12.39□□□□□ -0.43
TROAP-210ENST00000549534 RHOBTB2Q9BYZ6 727 aa12.39□□□□□ -0.43
TROAP-210ENST00000549534 MAF1Q9H063 256 aa12.39□□□□□ -0.43
TROAP-210ENST00000549534 CHMP4BQ9H444 224 aaKnown RBP12.39□□□□□ -0.43
TROAP-210ENST00000549534 MTMR4Q9NYA4 1195 aa12.39□□□□□ -0.43
TROAP-210ENST00000549534 MTF2Q9Y483 593 aaPredicted RBP12.39□□□□□ -0.43
TROAP-210ENST00000549534 PCDHB7Q9Y5E2 793 aa12.39□□□□□ -0.43
TROAP-210ENST00000549534 TBKBP1A7MCY6 615 aa12.38□□□□□ -0.43
TROAP-210ENST00000549534 ANHXE9PGG2 379 aa12.38□□□□□ -0.43
TROAP-210ENST00000549534 LILRB3O75022 631 aa12.38□□□□□ -0.43
TROAP-210ENST00000549534 N4BP1O75113 896 aaKnown RBP12.38□□□□□ -0.43
TROAP-210ENST00000549534 EPCAMP16422 314 aa12.38□□□□□ -0.43
TROAP-210ENST00000549534 RARSP54136 660 aaKnown RBP12.38□□□□□ -0.43
TROAP-210ENST00000549534 ADAM17P78536 824 aa12.38□□□□□ -0.43
TROAP-210ENST00000549534 TTF1Q15361 905 aaPredicted RBP12.38□□□□□ -0.43
TROAP-210ENST00000549534 SF3A2Q15428 464 aaKnown RBP12.38□□□□□ -0.43
TROAP-210ENST00000549534 STXBP2Q15833 593 aa12.38□□□□□ -0.43
TROAP-210ENST00000549534 SLC9C2Q5TAH2 1124 aa12.38□□□□□ -0.43
TROAP-210ENST00000549534 SLC22A17Q8WUG5 538 aa12.38□□□□□ -0.43
TROAP-210ENST00000549534 CLEC4DQ8WXI8 215 aa12.38□□□□□ -0.43
TROAP-210ENST00000549534 UBL7Q96S82 380 aaPredicted RBP12.38□□□□□ -0.43
TROAP-210ENST00000549534 IWS1Q96ST2 819 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms