RNA–Protein interactions for RNA: ENST00000549396.5

PPFIA2-216, Transcript of PTPRF interacting protein alpha 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA2, Length 5,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-216ENST00000549396 EXOSC10Q01780 885 aaKnown RBP10.02□□□□□ -0.81
PPFIA2-216ENST00000549396 LONRF3Q496Y0 759 aa10.02□□□□□ -0.81
PPFIA2-216ENST00000549396 ZNF667Q5HYK9 610 aa10.02□□□□□ -0.81
PPFIA2-216ENST00000549396 INTS5Q6P9B9 1019 aaKnown RBP10.02□□□□□ -0.81
PPFIA2-216ENST00000549396 GUF1Q8N442 669 aaKnown RBP10.02□□□□□ -0.81
PPFIA2-216ENST00000549396 SMARCAD1Q9H4L7 1026 aa10.02□□□□□ -0.81
PPFIA2-216ENST00000549396 RPAP3Q9H6T3 665 aaPredicted RBP10.02□□□□□ -0.81
PPFIA2-216ENST00000549396 TMEM63CQ9P1W3 806 aa10.02□□□□□ -0.81
PPFIA2-216ENST00000549396 EBAG9O00559 213 aa10.02□□□□□ -0.81
PPFIA2-216ENST00000549396 GH1P01241 217 aa10.02□□□□□ -0.81
PPFIA2-216ENST00000549396 MXRA7P84157 204 aa10.02□□□□□ -0.81
PPFIA2-216ENST00000549396 ITPK1Q13572 414 aa10.02□□□□□ -0.81
PPFIA2-216ENST00000549396 CLEC17AQ6ZS10 378 aa10.02□□□□□ -0.81
PPFIA2-216ENST00000549396 FAM83AQ86UY5 434 aa10.02□□□□□ -0.81
PPFIA2-216ENST00000549396 ADGRF4Q8IZF3 695 aa10.02□□□□□ -0.81
PPFIA2-216ENST00000549396 CMTR1Q8N1G2 835 aaKnown RBP10.02□□□□□ -0.81
PPFIA2-216ENST00000549396 C17orf75Q9HAS0 396 aa10.02□□□□□ -0.81
PPFIA2-216ENST00000549396 ST7Q9NRC1 585 aa10.02□□□□□ -0.81
PPFIA2-216ENST00000549396 CEP72Q9P209 647 aa10.02□□□□□ -0.81
PPFIA2-216ENST00000549396 USTQ9Y2C2 406 aa10.02□□□□□ -0.81
PPFIA2-216ENST00000549396 FOXP2O15409 715 aa10.01□□□□□ -0.81
PPFIA2-216ENST00000549396 ATP2C1P98194 919 aaPredicted RBP10.01□□□□□ -0.81
PPFIA2-216ENST00000549396 TSPY1Q01534 308 aa10.01□□□□□ -0.81
PPFIA2-216ENST00000549396 GABPAQ06546 454 aa10.01□□□□□ -0.81
PPFIA2-216ENST00000549396 BFSP1Q12934 665 aa10.01□□□□□ -0.81
PPFIA2-216ENST00000549396 XKR3Q5GH77 459 aa10.01□□□□□ -0.81
PPFIA2-216ENST00000549396 CPLX4Q7Z7G2 160 aa10.01□□□□□ -0.81
PPFIA2-216ENST00000549396 SCYL3Q8IZE3 742 aa10.01□□□□□ -0.81
PPFIA2-216ENST00000549396 SIX6OS1Q8N1H7 587 aa10.01□□□□□ -0.81
PPFIA2-216ENST00000549396 ZC3H15Q8WU90 426 aaKnown RBP10.01□□□□□ -0.81
PPFIA2-216ENST00000549396 GJA10Q969M2 543 aa10.01□□□□□ -0.81
PPFIA2-216ENST00000549396 DDX50Q9BQ39 737 aaKnown RBP10.01□□□□□ -0.81
PPFIA2-216ENST00000549396 NLRC4Q9NPP4 1024 aa10.01□□□□□ -0.81
PPFIA2-216ENST00000549396 EFCAB8A8MWE9 144 aa10.01□□□□□ -0.81
PPFIA2-216ENST00000549396 GOLGA8KD6RF30 607 aa10.01□□□□□ -0.81
PPFIA2-216ENST00000549396 NKRFO15226 690 aaKnown RBP eCLIP10.01□□□□□ -0.81
PPFIA2-216ENST00000549396 RAD51AP2Q09MP3 1159 aa10.01□□□□□ -0.81
PPFIA2-216ENST00000549396 PADI6Q6TGC4 694 aa10.01□□□□□ -0.81
PPFIA2-216ENST00000549396 CCDC25Q86WR0 208 aa10.01□□□□□ -0.81
PPFIA2-216ENST00000549396 GPRASP2Q96D09 838 aa10.01□□□□□ -0.81
PPFIA2-216ENST00000549396 ZDHHC15Q96MV8 337 aa10.01□□□□□ -0.81
PPFIA2-216ENST00000549396 MYOZ2Q9NPC6 264 aa10.01□□□□□ -0.81
PPFIA2-216ENST00000549396 SLC9A2Q9UBY0 812 aa10.01□□□□□ -0.81
PPFIA2-216ENST00000549396 PPP2R2CQ9Y2T4 447 aa10.01□□□□□ -0.81
PPFIA2-216ENST00000549396 CIB2O75838 187 aa10.01□□□□□ -0.81
PPFIA2-216ENST00000549396 DGAT1O75907 488 aa10.01□□□□□ -0.81
PPFIA2-216ENST00000549396 E2F5Q15329 346 aa10.01□□□□□ -0.81
PPFIA2-216ENST00000549396 DNAJC24Q6P3W2 148 aa10.01□□□□□ -0.81
PPFIA2-216ENST00000549396 FANCLQ9NW38 375 aa10.01□□□□□ -0.81
PPFIA2-216ENST00000549396 MKRN1Q9UHC7 482 aaKnown RBP10.01□□□□□ -0.81
PPFIA2-216ENST00000549396 RFX5P48382 616 aaPredicted RBP10.01□□□□□ -0.81
PPFIA2-216ENST00000549396 SPP2Q13103 211 aa10.01□□□□□ -0.81
PPFIA2-216ENST00000549396 TOGARAM2Q6ZUX3 1019 aa10.01□□□□□ -0.81
PPFIA2-216ENST00000549396 VPS52Q8N1B4 723 aa10.01□□□□□ -0.81
PPFIA2-216ENST00000549396 EFHBQ8N7U6 833 aa10.01□□□□□ -0.81
PPFIA2-216ENST00000549396 CLIC6Q96NY7 704 aa10.01□□□□□ -0.81
PPFIA2-216ENST00000549396 PPP1R2P1Q96PQ5 205 aa10.01□□□□□ -0.81
PPFIA2-216ENST00000549396 PLEKHA8P1O95397 391 aa10□□□□□ -0.81
PPFIA2-216ENST00000549396 ATF2P15336 505 aa10□□□□□ -0.81
PPFIA2-216ENST00000549396 LDHDQ86WU2 507 aa10□□□□□ -0.81
PPFIA2-216ENST00000549396 AFAP1L1Q8TED9 768 aa10□□□□□ -0.81
PPFIA2-216ENST00000549396 MCM6Q14566 821 aa10□□□□□ -0.81
PPFIA2-216ENST00000549396 PDIA6Q15084 440 aa10□□□□□ -0.81
PPFIA2-216ENST00000549396 CEP55Q53EZ4 464 aa10□□□□□ -0.81
PPFIA2-216ENST00000549396 CDC42EP5Q6NZY7 148 aa10□□□□□ -0.81
PPFIA2-216ENST00000549396 CCDC68Q9H2F9 335 aa10□□□□□ -0.81
PPFIA2-216ENST00000549396 KCNK9Q9NPC2 374 aa10□□□□□ -0.81
PPFIA2-216ENST00000549396 FAM205AQ6ZU69 1335 aa10□□□□□ -0.81
PPFIA2-216ENST00000549396 IFT172Q9UG01 1749 aa10□□□□□ -0.81
PPFIA2-216ENST00000549396 TRAPPC3O43617 180 aa10□□□□□ -0.81
PPFIA2-216ENST00000549396 HHATQ5VTY9 493 aa10□□□□□ -0.81
PPFIA2-216ENST00000549396 RNF169Q8NCN4 708 aa10□□□□□ -0.81
PPFIA2-216ENST00000549396 FBXO41Q8TF61 875 aa10□□□□□ -0.81
PPFIA2-216ENST00000549396 CCDC127Q96BQ5 260 aa10□□□□□ -0.81
PPFIA2-216ENST00000549396 PSMD1Q99460 953 aa10□□□□□ -0.81
PPFIA2-216ENST00000549396 PAIP2Q9BPZ3 127 aaKnown RBP10□□□□□ -0.81
PPFIA2-216ENST00000549396 RAVER2Q9HCJ3 691 aaKnown RBP10□□□□□ -0.81
PPFIA2-216ENST00000549396 CPSF3Q9UKF6 684 aaKnown RBP10□□□□□ -0.81
PPFIA2-216ENST00000549396 USH1CQ9Y6N9 552 aa10□□□□□ -0.81
PPFIA2-216ENST00000549396 AP3B1O00203 1094 aa10□□□□□ -0.81
PPFIA2-216ENST00000549396 KRIT1O00522 736 aa10□□□□□ -0.81
PPFIA2-216ENST00000549396 CLDN3O15551 220 aa10□□□□□ -0.81
PPFIA2-216ENST00000549396 IL1R1P14778 569 aa10□□□□□ -0.81
PPFIA2-216ENST00000549396 GPC3P51654 580 aa10□□□□□ -0.81
PPFIA2-216ENST00000549396 ETF1P62495 437 aaKnown RBP10□□□□□ -0.81
PPFIA2-216ENST00000549396 PLCB4Q15147 1175 aa10□□□□□ -0.81
PPFIA2-216ENST00000549396 UBE2SQ16763 222 aa10□□□□□ -0.81
PPFIA2-216ENST00000549396 MAP3K21Q5TCX8 1036 aa10□□□□□ -0.81
PPFIA2-216ENST00000549396 DSTYKQ6XUX3 929 aa10□□□□□ -0.81
PPFIA2-216ENST00000549396 CYB5R4Q7L1T6 521 aa10□□□□□ -0.81
PPFIA2-216ENST00000549396 PALM2Q8IXS6 379 aa10□□□□□ -0.81
PPFIA2-216ENST00000549396 RDH13Q8NBN7 331 aa10□□□□□ -0.81
PPFIA2-216ENST00000549396 RNF139Q8WU17 664 aa10□□□□□ -0.81
PPFIA2-216ENST00000549396 MROH8Q9H579 483 aa10□□□□□ -0.81
PPFIA2-216ENST00000549396 ANKEF1Q9NU02 776 aa10□□□□□ -0.81
PPFIA2-216ENST00000549396 GCNT4Q9P109 453 aa10□□□□□ -0.81
PPFIA2-216ENST00000549396 KBTBD13C9JR72 458 aa9.99□□□□□ -0.81
PPFIA2-216ENST00000549396 HEXIM1O94992 359 aaKnown RBP9.99□□□□□ -0.81
PPFIA2-216ENST00000549396 CA4P22748 312 aa9.99□□□□□ -0.81
PPFIA2-216ENST00000549396 FRMD5Q7Z6J6 570 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms