RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 TIPINQ9BVW5 301 aa10.92□□□□□ -0.66
SMARCD1-206ENST00000549274 UNC93B1Q9H1C4 597 aa10.92□□□□□ -0.66
SMARCD1-206ENST00000549274 TUT1Q9H6E5 874 aaKnown RBP10.92□□□□□ -0.66
SMARCD1-206ENST00000549274 GDPD2Q9HCC8 539 aa10.92□□□□□ -0.66
SMARCD1-206ENST00000549274 BMP2KQ9NSY1 1161 aaPredicted RBP10.92□□□□□ -0.66
SMARCD1-206ENST00000549274 KCND2Q9NZV8 630 aa10.92□□□□□ -0.66
SMARCD1-206ENST00000549274 GABBR1Q9UBS5 961 aa10.92□□□□□ -0.66
SMARCD1-206ENST00000549274 KCNH3Q9ULD8 1083 aa10.92□□□□□ -0.66
SMARCD1-206ENST00000549274 SCN10AQ9Y5Y9 1956 aa10.92□□□□□ -0.66
SMARCD1-206ENST00000549274 CENPFP49454 3210 aa10.92□□□□□ -0.66
SMARCD1-206ENST00000549274 MROH7Q68CQ1 1323 aa10.91□□□□□ -0.66
SMARCD1-206ENST00000549274 EML1O00423 815 aa10.91□□□□□ -0.66
SMARCD1-206ENST00000549274 KINO60870 393 aaKnown RBP10.91□□□□□ -0.66
SMARCD1-206ENST00000549274 PRPF40AO75400 957 aaKnown RBP10.91□□□□□ -0.66
SMARCD1-206ENST00000549274 SLITRK3O94933 977 aa10.91□□□□□ -0.66
SMARCD1-206ENST00000549274 SGPL1O95470 568 aa10.91□□□□□ -0.66
SMARCD1-206ENST00000549274 OATP04181 439 aa10.91□□□□□ -0.66
SMARCD1-206ENST00000549274 MYL3P08590 195 aa10.91□□□□□ -0.66
SMARCD1-206ENST00000549274 MCM4P33991 863 aa10.91□□□□□ -0.66
SMARCD1-206ENST00000549274 STAT6P42226 847 aa10.91□□□□□ -0.66
SMARCD1-206ENST00000549274 GJA8P48165 433 aa10.91□□□□□ -0.66
SMARCD1-206ENST00000549274 PRKCEQ02156 737 aa10.91□□□□□ -0.66
SMARCD1-206ENST00000549274 FAM160A1Q05DH4 1040 aa10.91□□□□□ -0.66
SMARCD1-206ENST00000549274 LRRC41Q15345 812 aa10.91□□□□□ -0.66
SMARCD1-206ENST00000549274 IL17AQ16552 155 aa10.91□□□□□ -0.66
SMARCD1-206ENST00000549274 SKOR2Q2VWA4 1001 aaPredicted RBP10.91□□□□□ -0.66
SMARCD1-206ENST00000549274 ZNF484Q5JVG2 852 aa10.91□□□□□ -0.66
SMARCD1-206ENST00000549274 UTP14CQ5TAP6 766 aaKnown RBP10.91□□□□□ -0.66
SMARCD1-206ENST00000549274 LHX8Q68G74 356 aa10.91□□□□□ -0.66
SMARCD1-206ENST00000549274 SHC4Q6S5L8 630 aa10.91□□□□□ -0.66
SMARCD1-206ENST00000549274 CCDC60Q8IWA6 550 aaPredicted RBP10.91□□□□□ -0.66
SMARCD1-206ENST00000549274 TPH2Q8IWU9 490 aa10.91□□□□□ -0.66
SMARCD1-206ENST00000549274 ATP8B4Q8TF62 1192 aa10.91□□□□□ -0.66
SMARCD1-206ENST00000549274 SYAP1Q96A49 352 aaPredicted RBP10.91□□□□□ -0.66
SMARCD1-206ENST00000549274 DYDC2Q96IM9 177 aa10.91□□□□□ -0.66
SMARCD1-206ENST00000549274 CLIC6Q96NY7 704 aa10.91□□□□□ -0.66
SMARCD1-206ENST00000549274 DEFB118Q96PH6 123 aa10.91□□□□□ -0.66
SMARCD1-206ENST00000549274 CRISPLD2Q9H0B8 497 aa10.91□□□□□ -0.66
SMARCD1-206ENST00000549274 KCNG1Q9UIX4 513 aa10.91□□□□□ -0.66
SMARCD1-206ENST00000549274 DBR1Q9UK59 544 aaKnown RBP10.91□□□□□ -0.66
SMARCD1-206ENST00000549274 NRCAMQ92823 1304 aa10.9□□□□□ -0.66
SMARCD1-206ENST00000549274 POTEB3A0JP26 581 aa10.9□□□□□ -0.66
SMARCD1-206ENST00000549274 MAGEB2O15479 319 aa10.9□□□□□ -0.66
SMARCD1-206ENST00000549274 ADCY6O43306 1168 aa10.9□□□□□ -0.66
SMARCD1-206ENST00000549274 EYA4O95677 639 aa10.9□□□□□ -0.66
SMARCD1-206ENST00000549274 PGK1P00558 417 aa10.9□□□□□ -0.66
SMARCD1-206ENST00000549274 TFRCP02786 760 aaKnown RBP10.9□□□□□ -0.66
SMARCD1-206ENST00000549274 YWHABP31946 246 aaKnown RBP10.9□□□□□ -0.66
SMARCD1-206ENST00000549274 RFC5P40937 340 aa10.9□□□□□ -0.66
SMARCD1-206ENST00000549274 PURAQ00577 322 aaKnown RBP10.9□□□□□ -0.66
SMARCD1-206ENST00000549274 CYP4A11Q02928 519 aa10.9□□□□□ -0.66
SMARCD1-206ENST00000549274 KCNA10Q16322 511 aa10.9□□□□□ -0.66
SMARCD1-206ENST00000549274 TMEM119Q4V9L6 283 aa10.9□□□□□ -0.66
SMARCD1-206ENST00000549274 GJC2Q5T442 439 aaPredicted RBP10.9□□□□□ -0.66
SMARCD1-206ENST00000549274 NFRKBQ6P4R8 1299 aa10.9□□□□□ -0.66
SMARCD1-206ENST00000549274 POTEBQ6S5H4 581 aa10.9□□□□□ -0.66
SMARCD1-206ENST00000549274 CATSPER3Q86XQ3 398 aa10.9□□□□□ -0.66
SMARCD1-206ENST00000549274 RETREG2Q8NC44 543 aa10.9□□□□□ -0.66
SMARCD1-206ENST00000549274 U2AF1L4Q8WU68 220 aaKnown RBP10.9□□□□□ -0.66
SMARCD1-206ENST00000549274 LARP4BQ92615 738 aaKnown RBP10.9□□□□□ -0.66
SMARCD1-206ENST00000549274 GJA10Q969M2 543 aa10.9□□□□□ -0.66
SMARCD1-206ENST00000549274 CCDC47Q96A33 483 aaKnown RBP10.9□□□□□ -0.66
SMARCD1-206ENST00000549274 TIGD1Q96MW7 591 aa10.9□□□□□ -0.66
SMARCD1-206ENST00000549274 GTPBP4Q9BZE4 634 aaKnown RBP10.9□□□□□ -0.66
SMARCD1-206ENST00000549274 TNMDQ9H2S6 317 aa10.9□□□□□ -0.66
SMARCD1-206ENST00000549274 DDX19AQ9NUU7 478 aaKnown RBP10.9□□□□□ -0.66
SMARCD1-206ENST00000549274 PHF24Q9UPV7 400 aa10.9□□□□□ -0.66
SMARCD1-206ENST00000549274 KIAA1024Q9UPX6 916 aa10.9□□□□□ -0.66
SMARCD1-206ENST00000549274 TRPC6Q9Y210 931 aa10.9□□□□□ -0.66
SMARCD1-206ENST00000549274 ARID2Q68CP9 1835 aa10.89□□□□□ -0.67
SMARCD1-206ENST00000549274 A0A0U1RQG5 324 aaPredicted RBP10.89□□□□□ -0.67
SMARCD1-206ENST00000549274 ARHGEF35A5YM69 484 aa10.89□□□□□ -0.67
SMARCD1-206ENST00000549274 POLR2DO15514 142 aaKnown RBP10.89□□□□□ -0.67
SMARCD1-206ENST00000549274 ASGR1P07306 291 aa10.89□□□□□ -0.67
SMARCD1-206ENST00000549274 SLFN14P0C7P3 912 aa10.89□□□□□ -0.67
SMARCD1-206ENST00000549274 SPATA31C1P0DKV0 1188 aa10.89□□□□□ -0.67
SMARCD1-206ENST00000549274 PFKFB1P16118 471 aa10.89□□□□□ -0.67
SMARCD1-206ENST00000549274 PLCG1P19174 1290 aa10.89□□□□□ -0.67
SMARCD1-206ENST00000549274 SCP2P22307 547 aa10.89□□□□□ -0.67
SMARCD1-206ENST00000549274 ABCD1P33897 745 aa10.89□□□□□ -0.67
SMARCD1-206ENST00000549274 PSEN2P49810 448 aa10.89□□□□□ -0.67
SMARCD1-206ENST00000549274 ACLYP53396 1101 aa10.89□□□□□ -0.67
SMARCD1-206ENST00000549274 CDC42EP1Q00587 391 aa10.89□□□□□ -0.67
SMARCD1-206ENST00000549274 MFSD10Q14728 455 aa10.89□□□□□ -0.67
SMARCD1-206ENST00000549274 MTFR1Q15390 333 aa10.89□□□□□ -0.67
SMARCD1-206ENST00000549274 ZRSR1Q15695 479 aaKnown RBP10.89□□□□□ -0.67
SMARCD1-206ENST00000549274 SV2BQ7L1I2 683 aa10.89□□□□□ -0.67
SMARCD1-206ENST00000549274 SESTD1Q86VW0 696 aa10.89□□□□□ -0.67
SMARCD1-206ENST00000549274 ELOA2Q8IYF1 753 aaPredicted RBP10.89□□□□□ -0.67
SMARCD1-206ENST00000549274 BANK1Q8NDB2 785 aa10.89□□□□□ -0.67
SMARCD1-206ENST00000549274 MCPH1Q8NEM0 835 aa10.89□□□□□ -0.67
SMARCD1-206ENST00000549274 SLC7A3Q8WY07 619 aa10.89□□□□□ -0.67
SMARCD1-206ENST00000549274 EPSTI1Q96J88 318 aa10.89□□□□□ -0.67
SMARCD1-206ENST00000549274 UIMC1Q96RL1 719 aa10.89□□□□□ -0.67
SMARCD1-206ENST00000549274 C16orf70Q9BSU1 422 aa10.89□□□□□ -0.67
SMARCD1-206ENST00000549274 NIFKQ9BYG3 293 aaKnown RBP10.89□□□□□ -0.67
SMARCD1-206ENST00000549274 RGL1Q9NZL6 768 aa10.89□□□□□ -0.67
SMARCD1-206ENST00000549274 SEPT9Q9UHD8 586 aaPredicted RBP10.89□□□□□ -0.67
SMARCD1-206ENST00000549274 HPSEQ9Y251 543 aa10.89□□□□□ -0.67
SMARCD1-206ENST00000549274 KIAA0100Q14667 2235 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms