RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 USP17L6PQ6QN14 398 aa15.56■□□□□ 0.08
CDX2-202ENST00000548877 RBM23Q86U06 439 aaKnown RBP15.56■□□□□ 0.08
CDX2-202ENST00000548877 SMARCC2Q8TAQ2 1214 aa15.56■□□□□ 0.08
CDX2-202ENST00000548877 CUL5Q93034 780 aa15.56■□□□□ 0.08
CDX2-202ENST00000548877 RPGRIP1Q96KN7 1286 aa15.56■□□□□ 0.08
CDX2-202ENST00000548877 SPZ1Q9BXG8 430 aa15.56■□□□□ 0.08
CDX2-202ENST00000548877 S1PR5Q9H228 398 aa15.56■□□□□ 0.08
CDX2-202ENST00000548877 TMX1Q9H3N1 280 aa15.56■□□□□ 0.08
CDX2-202ENST00000548877 UBIAD1Q9Y5Z9 338 aa15.56■□□□□ 0.08
CDX2-202ENST00000548877 MYO10Q9HD67 2058 aa15.55■□□□□ 0.08
CDX2-202ENST00000548877 FSCN2O14926 492 aa15.55■□□□□ 0.08
CDX2-202ENST00000548877 INSRRP14616 1297 aa15.55■□□□□ 0.08
CDX2-202ENST00000548877 MARK3P27448 753 aa15.55■□□□□ 0.08
CDX2-202ENST00000548877 SARSP49591 514 aaKnown RBP15.55■□□□□ 0.08
CDX2-202ENST00000548877 PAN2Q504Q3 1202 aaKnown RBP15.55■□□□□ 0.08
CDX2-202ENST00000548877 NME8Q8N427 588 aa15.55■□□□□ 0.08
CDX2-202ENST00000548877 GLG1Q92896 1179 aa15.55■□□□□ 0.08
CDX2-202ENST00000548877 TNPO1Q92973 898 aaKnown RBP15.55■□□□□ 0.08
CDX2-202ENST00000548877 RIPOR3Q96MK2 946 aa15.55■□□□□ 0.08
CDX2-202ENST00000548877 NEK1Q96PY6 1258 aa15.55■□□□□ 0.08
CDX2-202ENST00000548877 PCYT2Q99447 389 aa15.55■□□□□ 0.08
CDX2-202ENST00000548877 CELF4Q9BZC1 486 aaKnown RBP15.55■□□□□ 0.08
CDX2-202ENST00000548877 SENP2Q9HC62 589 aa15.55■□□□□ 0.08
CDX2-202ENST00000548877 TLR9Q9NR96 1032 aa15.55■□□□□ 0.08
CDX2-202ENST00000548877 AAASQ9NRG9 546 aa15.55■□□□□ 0.08
CDX2-202ENST00000548877 FAM86C1Q9NVL1 165 aa15.55■□□□□ 0.08
CDX2-202ENST00000548877 RNF216Q9NWF9 866 aaPredicted RBP15.55■□□□□ 0.08
CDX2-202ENST00000548877 PCDHB12Q9Y5F1 795 aa15.55■□□□□ 0.08
CDX2-202ENST00000548877 PCDHGC5Q9Y5F6 944 aa15.55■□□□□ 0.08
CDX2-202ENST00000548877 RIF1Q5UIP0 2472 aaKnown RBP15.55■□□□□ 0.08
CDX2-202ENST00000548877 MYO15AQ9UKN7 3530 aa15.55■□□□□ 0.08
CDX2-202ENST00000548877 FAM186AA6NE01 2351 aa15.54■□□□□ 0.08
CDX2-202ENST00000548877 M0QZ92 97 aa15.54■□□□□ 0.08
CDX2-202ENST00000548877 IFIT3O14879 490 aaKnown RBP15.54■□□□□ 0.08
CDX2-202ENST00000548877 GATMP50440 423 aa15.54■□□□□ 0.08
CDX2-202ENST00000548877 TRDNQ13061 729 aa15.54■□□□□ 0.08
CDX2-202ENST00000548877 PAK2Q13177 524 aa15.54■□□□□ 0.08
CDX2-202ENST00000548877 ATOH1Q92858 354 aaPredicted RBP15.54■□□□□ 0.08
CDX2-202ENST00000548877 IL25Q9H293 177 aa15.54■□□□□ 0.08
CDX2-202ENST00000548877 LZTS1Q9Y250 596 aa15.54■□□□□ 0.08
CDX2-202ENST00000548877 SMIM35A0A1B0GVV1 85 aa15.53■□□□□ 0.08
CDX2-202ENST00000548877 ERICH2A1L162 156 aa15.53■□□□□ 0.08
CDX2-202ENST00000548877 PER2O15055 1255 aa15.53■□□□□ 0.08
CDX2-202ENST00000548877 GALR2O43603 387 aaPredicted RBP15.53■□□□□ 0.08
CDX2-202ENST00000548877 FGF18O76093 207 aa15.53■□□□□ 0.08
CDX2-202ENST00000548877 ERVFC1P60507 584 aa15.53■□□□□ 0.08
CDX2-202ENST00000548877 AAMPQ13685 434 aa15.53■□□□□ 0.08
CDX2-202ENST00000548877 WTAPQ15007 396 aa15.53■□□□□ 0.08
CDX2-202ENST00000548877 ANKRD54Q6NXT1 300 aa15.53■□□□□ 0.08
CDX2-202ENST00000548877 SYCE2Q6PIF2 218 aa15.53■□□□□ 0.08
CDX2-202ENST00000548877 PLPPR4Q7Z2D5 763 aa15.53■□□□□ 0.08
CDX2-202ENST00000548877 CHD1LQ86WJ1 897 aa15.53■□□□□ 0.08
CDX2-202ENST00000548877 FAM49AQ9H0Q0 323 aaPredicted RBP15.53■□□□□ 0.08
CDX2-202ENST00000548877 ERVK-5Q9HDB9 667 aa15.53■□□□□ 0.08
CDX2-202ENST00000548877 JADE2Q9NQC1 790 aa15.53■□□□□ 0.08
CDX2-202ENST00000548877 LRFN2Q9ULH4 789 aa15.53■□□□□ 0.08
CDX2-202ENST00000548877 CYP21A2P08686 494 aa15.52■□□□□ 0.08
CDX2-202ENST00000548877 SRGAP2BP0DMP2 458 aa15.52■□□□□ 0.08
CDX2-202ENST00000548877 HOXB8P17481 243 aaPredicted RBP15.52■□□□□ 0.08
CDX2-202ENST00000548877 NBL1P41271 181 aa15.52■□□□□ 0.08
CDX2-202ENST00000548877 IGBP1P78318 339 aa15.52■□□□□ 0.08
CDX2-202ENST00000548877 RBM10P98175 930 aaKnown RBP15.52■□□□□ 0.08
CDX2-202ENST00000548877 PLCB3Q01970 1234 aa15.52■□□□□ 0.08
CDX2-202ENST00000548877 NUCB1Q02818 461 aa15.52■□□□□ 0.08
CDX2-202ENST00000548877 MTMR1Q13613 665 aa15.52■□□□□ 0.08
CDX2-202ENST00000548877 CATIPQ7Z7H3 387 aa15.52■□□□□ 0.08
CDX2-202ENST00000548877 IGDCC4Q8TDY8 1250 aa15.52■□□□□ 0.08
CDX2-202ENST00000548877 MICAL1Q8TDZ2 1067 aa15.52■□□□□ 0.08
CDX2-202ENST00000548877 ZBTB10Q96DT7 871 aa15.52■□□□□ 0.08
CDX2-202ENST00000548877 RRP36Q96EU6 259 aaKnown RBP15.52■□□□□ 0.08
CDX2-202ENST00000548877 RGS18Q9NS28 235 aa15.52■□□□□ 0.08
CDX2-202ENST00000548877 C1orf112Q9NSG2 853 aa15.52■□□□□ 0.08
CDX2-202ENST00000548877 PCDHB7Q9Y5E2 793 aa15.52■□□□□ 0.08
CDX2-202ENST00000548877 U3KPZ7 1027 aaPredicted RBP15.52■□□□□ 0.08
CDX2-202ENST00000548877 VPS13AQ96RL7 3174 aa15.52■□□□□ 0.07
CDX2-202ENST00000548877 C9IYK1 514 aa15.51■□□□□ 0.07
CDX2-202ENST00000548877 MGEA5O60502 916 aa15.51■□□□□ 0.07
CDX2-202ENST00000548877 FAM189BP81408 668 aa15.51■□□□□ 0.07
CDX2-202ENST00000548877 KRT76Q01546 638 aa15.51■□□□□ 0.07
CDX2-202ENST00000548877 SART3Q15020 963 aaKnown RBP15.51■□□□□ 0.07
CDX2-202ENST00000548877 PLCB4Q15147 1175 aa15.51■□□□□ 0.07
CDX2-202ENST00000548877 SLC24A5Q71RS6 500 aa15.51■□□□□ 0.07
CDX2-202ENST00000548877 UBALD2Q8IYN6 164 aa15.51■□□□□ 0.07
CDX2-202ENST00000548877 COLGALT1Q8NBJ5 622 aa15.51■□□□□ 0.07
CDX2-202ENST00000548877 LZTS2Q9BRK4 669 aa15.51■□□□□ 0.07
CDX2-202ENST00000548877 CWH43Q9H720 699 aa15.51■□□□□ 0.07
CDX2-202ENST00000548877 JPH1Q9HDC5 661 aaPredicted RBP15.51■□□□□ 0.07
CDX2-202ENST00000548877 DCHS1Q96JQ0 3298 aa15.51■□□□□ 0.07
CDX2-202ENST00000548877 NFASCO94856 1347 aa15.5■□□□□ 0.07
CDX2-202ENST00000548877 EVPLQ92817 2033 aa15.5■□□□□ 0.07
CDX2-202ENST00000548877 H0Y858 1186 aa15.5■□□□□ 0.07
CDX2-202ENST00000548877 PPFIA3O75145 1194 aa15.5■□□□□ 0.07
CDX2-202ENST00000548877 DDAH1O94760 285 aa15.5■□□□□ 0.07
CDX2-202ENST00000548877 ATG7O95352 703 aa15.5■□□□□ 0.07
CDX2-202ENST00000548877 SLC26A2P50443 739 aa15.5■□□□□ 0.07
CDX2-202ENST00000548877 TMEM62Q0P6H9 643 aa15.5■□□□□ 0.07
CDX2-202ENST00000548877 ODR4Q5SWX8 454 aa15.5■□□□□ 0.07
CDX2-202ENST00000548877 NCOA7Q8NI08 942 aa15.5■□□□□ 0.07
CDX2-202ENST00000548877 MRPS27Q92552 414 aaKnown RBP15.5■□□□□ 0.07
CDX2-202ENST00000548877 CCDC136Q96JN2 1154 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms