RNA–Protein interactions for RNA: ENST00000548821.1

GCN1-205, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 504 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-205ENST00000548821 PCDHA10Q9Y5I2 948 aa10.94□□□□□ -0.66
GCN1-205ENST00000548821 CDY2AQ9Y6F7 541 aa10.94□□□□□ -0.66
GCN1-205ENST00000548821 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.93□□□□□ -0.66
GCN1-205ENST00000548821 DENND3A2RUS2 1198 aa10.93□□□□□ -0.66
GCN1-205ENST00000548821 C5orf67F2Z3F1 127 aa10.93□□□□□ -0.66
GCN1-205ENST00000548821 HOXA2O43364 376 aa10.93□□□□□ -0.66
GCN1-205ENST00000548821 LPXNO60711 386 aa10.93□□□□□ -0.66
GCN1-205ENST00000548821 CDKL5O76039 1030 aa10.93□□□□□ -0.66
GCN1-205ENST00000548821 ALADP13716 330 aa10.93□□□□□ -0.66
GCN1-205ENST00000548821 SFNP31947 248 aa10.93□□□□□ -0.66
GCN1-205ENST00000548821 CTNNB1P35222 781 aa10.93□□□□□ -0.66
GCN1-205ENST00000548821 ADD1P35611 737 aaKnown RBP10.93□□□□□ -0.66
GCN1-205ENST00000548821 CLK2P49760 499 aaKnown RBP10.93□□□□□ -0.66
GCN1-205ENST00000548821 LPIN1Q14693 890 aa10.93□□□□□ -0.66
GCN1-205ENST00000548821 PLCB4Q15147 1175 aa10.93□□□□□ -0.66
GCN1-205ENST00000548821 MTHFD1LQ6UB35 978 aa10.93□□□□□ -0.66
GCN1-205ENST00000548821 EXOC8Q8IYI6 725 aa10.93□□□□□ -0.66
GCN1-205ENST00000548821 CMTR2Q8IYT2 770 aaKnown RBP10.93□□□□□ -0.66
GCN1-205ENST00000548821 RSPH1Q8WYR4 309 aa10.93□□□□□ -0.66
GCN1-205ENST00000548821 KCNB2Q92953 911 aa10.93□□□□□ -0.66
GCN1-205ENST00000548821 BRF1Q92994 677 aa10.93□□□□□ -0.66
GCN1-205ENST00000548821 P2RX5Q93086 422 aa10.93□□□□□ -0.66
GCN1-205ENST00000548821 C17orf80Q9BSJ5 609 aa10.93□□□□□ -0.66
GCN1-205ENST00000548821 UPF3BQ9BZI7 483 aaKnown RBP10.93□□□□□ -0.66
GCN1-205ENST00000548821 FAM49AQ9H0Q0 323 aaPredicted RBP10.93□□□□□ -0.66
GCN1-205ENST00000548821 UBE2ZQ9H832 354 aaPredicted RBP10.93□□□□□ -0.66
GCN1-205ENST00000548821 BRPF3Q9ULD4 1205 aa10.93□□□□□ -0.66
GCN1-205ENST00000548821 CYP46A1Q9Y6A2 500 aa10.93□□□□□ -0.66
GCN1-205ENST00000548821 MYH7BA7E2Y1 1941 aa10.92□□□□□ -0.66
GCN1-205ENST00000548821 ADGRA3Q8IWK6 1321 aa10.92□□□□□ -0.66
GCN1-205ENST00000548821 IGKV6D-21A0A0A0MT36 114 aa10.92□□□□□ -0.66
GCN1-205ENST00000548821 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.92□□□□□ -0.66
GCN1-205ENST00000548821 EPOPA6NHQ4 379 aa10.92□□□□□ -0.66
GCN1-205ENST00000548821 WDR64B1ANS9 1081 aa10.92□□□□□ -0.66
GCN1-205ENST00000548821 DKC1O60832 514 aaKnown RBP eCLIP10.92□□□□□ -0.66
GCN1-205ENST00000548821 RPS6KA5O75582 802 aa10.92□□□□□ -0.66
GCN1-205ENST00000548821 ARP10275 920 aa10.92□□□□□ -0.66
GCN1-205ENST00000548821 ZSCAN20P17040 1043 aaPredicted RBP10.92□□□□□ -0.66
GCN1-205ENST00000548821 IFNAR1P17181 557 aa10.92□□□□□ -0.66
GCN1-205ENST00000548821 RPS6KB1P23443 525 aa10.92□□□□□ -0.66
GCN1-205ENST00000548821 KLRC1P26715 233 aa10.92□□□□□ -0.66
GCN1-205ENST00000548821 DNM2P50570 870 aa10.92□□□□□ -0.66
GCN1-205ENST00000548821 NLRP5P59047 1200 aa10.92□□□□□ -0.66
GCN1-205ENST00000548821 TFF2Q03403 129 aa10.92□□□□□ -0.66
GCN1-205ENST00000548821 SSRP1Q08945 709 aaKnown RBP10.92□□□□□ -0.66
GCN1-205ENST00000548821 MGAT3Q09327 533 aa10.92□□□□□ -0.66
GCN1-205ENST00000548821 FUT2Q10981 343 aa10.92□□□□□ -0.66
GCN1-205ENST00000548821 MKRN4PQ13434 485 aaPredicted RBP10.92□□□□□ -0.66
GCN1-205ENST00000548821 BMS1Q14692 1282 aaKnown RBP10.92□□□□□ -0.66
GCN1-205ENST00000548821 ADCK5Q3MIX3 580 aa10.92□□□□□ -0.66
GCN1-205ENST00000548821 MARCH8Q5T0T0 291 aa10.92□□□□□ -0.66
GCN1-205ENST00000548821 JAKMIP3Q5VZ66 844 aa10.92□□□□□ -0.66
GCN1-205ENST00000548821 PDE12Q6L8Q7 609 aaKnown RBP10.92□□□□□ -0.66
GCN1-205ENST00000548821 SWSAP1Q6NVH7 229 aa10.92□□□□□ -0.66
GCN1-205ENST00000548821 ABHD15Q6UXT9 468 aa10.92□□□□□ -0.66
GCN1-205ENST00000548821 TMCO2Q7Z6W1 182 aaPredicted RBP10.92□□□□□ -0.66
GCN1-205ENST00000548821 RASEFQ8IZ41 740 aa10.92□□□□□ -0.66
GCN1-205ENST00000548821 CLP1Q92989 425 aaKnown RBP10.92□□□□□ -0.66
GCN1-205ENST00000548821 PABPC5Q96DU9 382 aaKnown RBP10.92□□□□□ -0.66
GCN1-205ENST00000548821 MAP7D2Q96T17 732 aa10.92□□□□□ -0.66
GCN1-205ENST00000548821 POP1Q99575 1024 aaKnown RBP10.92□□□□□ -0.66
GCN1-205ENST00000548821 NAP1L4Q99733 375 aaKnown RBP10.92□□□□□ -0.66
GCN1-205ENST00000548821 FOXD4L1Q9NU39 408 aa10.92□□□□□ -0.66
GCN1-205ENST00000548821 PRKAG3Q9UGI9 489 aa10.92□□□□□ -0.66
GCN1-205ENST00000548821 PADI3Q9ULW8 664 aa10.92□□□□□ -0.66
GCN1-205ENST00000548821 ARIH1Q9Y4X5 557 aaPredicted RBP10.92□□□□□ -0.66
GCN1-205ENST00000548821 PCDHB12Q9Y5F1 795 aa10.92□□□□□ -0.66
GCN1-205ENST00000548821 IGSF9BQ9UPX0 1349 aa10.91□□□□□ -0.66
GCN1-205ENST00000548821 DGKIO75912 1065 aa10.91□□□□□ -0.66
GCN1-205ENST00000548821 SRGAP2BP0DMP2 458 aa10.91□□□□□ -0.66
GCN1-205ENST00000548821 KCNA5P22460 613 aa10.91□□□□□ -0.66
GCN1-205ENST00000548821 CIITAP33076 1130 aa10.91□□□□□ -0.66
GCN1-205ENST00000548821 JAK3P52333 1124 aa10.91□□□□□ -0.66
GCN1-205ENST00000548821 CRYBB1P53674 252 aaPredicted RBP10.91□□□□□ -0.66
GCN1-205ENST00000548821 UBE3AQ05086 875 aa10.91□□□□□ -0.66
GCN1-205ENST00000548821 APOBRQ0VD83 1088 aa10.91□□□□□ -0.66
GCN1-205ENST00000548821 NFX1Q12986 1120 aaKnown RBP10.91□□□□□ -0.66
GCN1-205ENST00000548821 RUFY4Q6ZNE9 571 aa10.91□□□□□ -0.66
GCN1-205ENST00000548821 EP400NLQ6ZTU2 488 aa10.91□□□□□ -0.66
GCN1-205ENST00000548821 SLC24A5Q71RS6 500 aa10.91□□□□□ -0.66
GCN1-205ENST00000548821 RUFY3Q7L099 469 aa10.91□□□□□ -0.66
GCN1-205ENST00000548821 METTL13Q8N6R0 699 aa10.91□□□□□ -0.66
GCN1-205ENST00000548821 RDM1Q8NG50 284 aa10.91□□□□□ -0.66
GCN1-205ENST00000548821 ZNF274Q96GC6 653 aaPredicted RBP10.91□□□□□ -0.66
GCN1-205ENST00000548821 RIT2Q99578 217 aa10.91□□□□□ -0.66
GCN1-205ENST00000548821 JPH2Q9BR39 696 aaPredicted RBP10.91□□□□□ -0.66
GCN1-205ENST00000548821 PUF60Q9UHX1 559 aaKnown RBP10.91□□□□□ -0.66
GCN1-205ENST00000548821 HCN4Q9Y3Q4 1203 aa10.91□□□□□ -0.66
GCN1-205ENST00000548821 SCN5AQ14524 2016 aa10.91□□□□□ -0.66
GCN1-205ENST00000548821 TRIP12Q14669 1992 aaPredicted RBP10.9□□□□□ -0.66
GCN1-205ENST00000548821 DEXIO95424 95 aa10.9□□□□□ -0.66
GCN1-205ENST00000548821 CDC27P30260 824 aa10.9□□□□□ -0.66
GCN1-205ENST00000548821 CD52P31358 61 aa10.9□□□□□ -0.66
GCN1-205ENST00000548821 SSTR3P32745 418 aaPredicted RBP10.9□□□□□ -0.66
GCN1-205ENST00000548821 SARSP49591 514 aaKnown RBP10.9□□□□□ -0.66
GCN1-205ENST00000548821 KCNQ1P51787 676 aa10.9□□□□□ -0.66
GCN1-205ENST00000548821 EVCP57679 992 aa10.9□□□□□ -0.66
GCN1-205ENST00000548821 ITGB3BPQ13352 177 aaPredicted RBP10.9□□□□□ -0.66
GCN1-205ENST00000548821 ANKRD1Q15327 319 aa10.9□□□□□ -0.66
GCN1-205ENST00000548821 TCTN1Q2MV58 587 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms