RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 WNK4Q96J92 1243 aa6.32□□□□□ -1.4
CCDC38-206ENST00000548771 IPO9Q96P70 1041 aaKnown RBP6.32□□□□□ -1.4
CCDC38-206ENST00000548771 RIC8BQ9NVN3 520 aa6.32□□□□□ -1.4
CCDC38-206ENST00000548771 PTPN22Q9Y2R2 807 aa6.32□□□□□ -1.4
CCDC38-206ENST00000548771 CCDC66A2RUB6 948 aa6.31□□□□□ -1.4
CCDC38-206ENST00000548771 GSTA4O15217 222 aa6.31□□□□□ -1.4
CCDC38-206ENST00000548771 CUTAO60888 179 aa6.31□□□□□ -1.4
CCDC38-206ENST00000548771 ZNF623O75123 536 aa6.31□□□□□ -1.4
CCDC38-206ENST00000548771 SRGAP2CP0DJJ0 459 aa6.31□□□□□ -1.4
CCDC38-206ENST00000548771 GDF5P43026 501 aa6.31□□□□□ -1.4
CCDC38-206ENST00000548771 USP10Q14694 798 aaKnown RBP6.31□□□□□ -1.4
CCDC38-206ENST00000548771 DPP8Q6V1X1 898 aaPredicted RBP6.31□□□□□ -1.4
CCDC38-206ENST00000548771 GPR155Q7Z3F1 870 aa6.31□□□□□ -1.4
CCDC38-206ENST00000548771 NOSTRINQ8IVI9 506 aa6.31□□□□□ -1.4
CCDC38-206ENST00000548771 AMNQ9BXJ7 453 aa6.31□□□□□ -1.4
CCDC38-206ENST00000548771 GALNT8Q9NY28 637 aa6.31□□□□□ -1.4
CCDC38-206ENST00000548771 PODXL2Q9NZ53 605 aa6.31□□□□□ -1.4
CCDC38-206ENST00000548771 TESMINQ9Y4I5 508 aa6.31□□□□□ -1.4
CCDC38-206ENST00000548771 FOXS1O43638 330 aa6.3□□□□□ -1.4
CCDC38-206ENST00000548771 EFCAB14O75071 495 aa6.3□□□□□ -1.4
CCDC38-206ENST00000548771 PTGS1P23219 599 aa6.3□□□□□ -1.4
CCDC38-206ENST00000548771 IL13RA1P78552 427 aa6.3□□□□□ -1.4
CCDC38-206ENST00000548771 TM4SF20Q53R12 229 aa6.3□□□□□ -1.4
CCDC38-206ENST00000548771 FAM47CQ5HY64 1035 aa6.3□□□□□ -1.4
CCDC38-206ENST00000548771 CRB2Q5IJ48 1285 aa6.3□□□□□ -1.4
CCDC38-206ENST00000548771 TCTN3Q6NUS6 607 aa6.3□□□□□ -1.4
CCDC38-206ENST00000548771 CXXC5Q7LFL8 322 aaKnown RBP6.3□□□□□ -1.4
CCDC38-206ENST00000548771 DNAJC7Q99615 494 aa6.3□□□□□ -1.4
CCDC38-206ENST00000548771 CARD11Q9BXL7 1154 aa6.3□□□□□ -1.4
CCDC38-206ENST00000548771 ZDHHC5Q9C0B5 715 aa6.3□□□□□ -1.4
CCDC38-206ENST00000548771 JADE2Q9NQC1 790 aa6.3□□□□□ -1.4
CCDC38-206ENST00000548771 PPP1R1BQ9UD71 204 aaPredicted RBP6.3□□□□□ -1.4
CCDC38-206ENST00000548771 CCDC163A0A0D9SF12 145 aa6.29□□□□□ -1.4
CCDC38-206ENST00000548771 ACVRL1P37023 503 aa6.29□□□□□ -1.4
CCDC38-206ENST00000548771 ETV4P43268 484 aa6.29□□□□□ -1.4
CCDC38-206ENST00000548771 ST5P78524 1137 aa6.29□□□□□ -1.4
CCDC38-206ENST00000548771 FSTL4Q6MZW2 842 aa6.29□□□□□ -1.4
CCDC38-206ENST00000548771 OVCH1Q7RTY7 1134 aa6.29□□□□□ -1.4
CCDC38-206ENST00000548771 DLG3Q92796 817 aa6.29□□□□□ -1.4
CCDC38-206ENST00000548771 GNRHR2Q96P88 292 aa6.29□□□□□ -1.4
CCDC38-206ENST00000548771 CDK5RAP1Q96SZ6 601 aaKnown RBP6.29□□□□□ -1.4
CCDC38-206ENST00000548771 CELF4Q9BZC1 486 aaKnown RBP6.29□□□□□ -1.4
CCDC38-206ENST00000548771 INCENPQ9NQS7 918 aa6.29□□□□□ -1.4
CCDC38-206ENST00000548771 ESYT3A0FGR9 886 aa6.28□□□□□ -1.4
CCDC38-206ENST00000548771 MATN2O00339 956 aa6.28□□□□□ -1.4
CCDC38-206ENST00000548771 KCNK3O14649 394 aa6.28□□□□□ -1.4
CCDC38-206ENST00000548771 KRT15P19012 456 aa6.28□□□□□ -1.4
CCDC38-206ENST00000548771 MC4RP32245 332 aa6.28□□□□□ -1.4
CCDC38-206ENST00000548771 SELENOPP49908 381 aa6.28□□□□□ -1.4
CCDC38-206ENST00000548771 DUSP8Q13202 625 aa6.28□□□□□ -1.4
CCDC38-206ENST00000548771 EIF4HQ15056 248 aaKnown RBP6.28□□□□□ -1.4
CCDC38-206ENST00000548771 RNF151Q2KHN1 245 aa6.28□□□□□ -1.4
CCDC38-206ENST00000548771 KANK2Q63ZY3 851 aa6.28□□□□□ -1.4
CCDC38-206ENST00000548771 CRIP3Q6Q6R5 217 aa6.28□□□□□ -1.4
CCDC38-206ENST00000548771 ZC3H7AQ8IWR0 971 aaKnown RBP6.28□□□□□ -1.4
CCDC38-206ENST00000548771 NEIL1Q96FI4 390 aaPredicted RBP6.28□□□□□ -1.4
CCDC38-206ENST00000548771 LMF1Q96S06 567 aa6.28□□□□□ -1.4
CCDC38-206ENST00000548771 BTBD2Q9BX70 525 aa6.28□□□□□ -1.4
CCDC38-206ENST00000548771 SEMA4AQ9H3S1 761 aa6.28□□□□□ -1.4
CCDC38-206ENST00000548771 ARHGAP28Q9P2N2 729 aa6.28□□□□□ -1.4
CCDC38-206ENST00000548771 RASGRP1O95267 797 aa6.27□□□□□ -1.41
CCDC38-206ENST00000548771 DNM2P50570 870 aa6.27□□□□□ -1.41
CCDC38-206ENST00000548771 NFYCQ13952 458 aa6.27□□□□□ -1.41
CCDC38-206ENST00000548771 SOGA3Q5TF21 947 aa6.27□□□□□ -1.41
CCDC38-206ENST00000548771 TRIM68Q6AZZ1 485 aa6.27□□□□□ -1.41
CCDC38-206ENST00000548771 ZNF585AQ6P3V2 769 aa6.27□□□□□ -1.41
CCDC38-206ENST00000548771 ABHD17CQ6PCB6 329 aa6.27□□□□□ -1.41
CCDC38-206ENST00000548771 LARP4Q71RC2 724 aaKnown RBP eCLIP6.27□□□□□ -1.41
CCDC38-206ENST00000548771 THAP3Q8WTV1 239 aaPredicted RBP6.27□□□□□ -1.41
CCDC38-206ENST00000548771 MRPL4Q9BYD3 311 aaKnown RBP6.27□□□□□ -1.41
CCDC38-206ENST00000548771 DEF6Q9H4E7 631 aa6.27□□□□□ -1.41
CCDC38-206ENST00000548771 SLITRK6Q9H5Y7 841 aa6.27□□□□□ -1.41
CCDC38-206ENST00000548771 COQ6Q9Y2Z9 468 aa6.27□□□□□ -1.41
CCDC38-206ENST00000548771 B3GALT1Q9Y5Z6 326 aa6.27□□□□□ -1.41
CCDC38-206ENST00000548771 TCRBV16S1A1N1A0A5B0 115 aa6.26□□□□□ -1.41
CCDC38-206ENST00000548771 RASSF10A6NK89 507 aa6.26□□□□□ -1.41
CCDC38-206ENST00000548771 ZBTB48P10074 688 aaPredicted RBP6.26□□□□□ -1.41
CCDC38-206ENST00000548771 SDHAP31040 664 aa6.26□□□□□ -1.41
CCDC38-206ENST00000548771 TBR1Q16650 682 aa6.26□□□□□ -1.41
CCDC38-206ENST00000548771 TMEM200BQ69YZ2 307 aa6.26□□□□□ -1.41
CCDC38-206ENST00000548771 Q6ZSN1 163 aa6.26□□□□□ -1.41
CCDC38-206ENST00000548771 LILRB2Q8N423 598 aa6.26□□□□□ -1.41
CCDC38-206ENST00000548771 SCYL1Q96KG9 808 aa6.26□□□□□ -1.41
CCDC38-206ENST00000548771 MAGEB10Q96LZ2 347 aaPredicted RBP6.26□□□□□ -1.41
CCDC38-206ENST00000548771 TRIM39Q9HCM9 518 aa6.26□□□□□ -1.41
CCDC38-206ENST00000548771 NDOR1Q9UHB4 597 aa6.26□□□□□ -1.41
CCDC38-206ENST00000548771 FBXO10Q9UK96 956 aa6.26□□□□□ -1.41
CCDC38-206ENST00000548771 ZFR2Q9UPR6 939 aaKnown RBP6.26□□□□□ -1.41
CCDC38-206ENST00000548771 MAFO75444 373 aaPredicted RBP6.25□□□□□ -1.41
CCDC38-206ENST00000548771 NPTXRO95502 500 aa6.25□□□□□ -1.41
CCDC38-206ENST00000548771 ECE1P42892 770 aa6.25□□□□□ -1.41
CCDC38-206ENST00000548771 C2orf27AQ580R0 203 aa6.25□□□□□ -1.41
CCDC38-206ENST00000548771 ZMAT1Q5H9K5 638 aa6.25□□□□□ -1.41
CCDC38-206ENST00000548771 LRSAM1Q6UWE0 723 aa6.25□□□□□ -1.41
CCDC38-206ENST00000548771 OTOP1Q7RTM1 612 aa6.25□□□□□ -1.41
CCDC38-206ENST00000548771 FGD2Q7Z6J4 655 aa6.25□□□□□ -1.41
CCDC38-206ENST00000548771 TAX1BP1Q86VP1 789 aa6.25□□□□□ -1.41
CCDC38-206ENST00000548771 IFNL2Q8IZJ0 200 aa6.25□□□□□ -1.41
CCDC38-206ENST00000548771 ZSWIM2Q8NEG5 633 aa6.25□□□□□ -1.41
CCDC38-206ENST00000548771 ASB15Q8WXK1 588 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms