RNA–Protein interactions for RNA: ENST00000547381.1

SSH1-206, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-206ENST00000547381 SQORQ9Y6N5 450 aa14.04□□□□□ -0.16
SSH1-206ENST00000547381 MYO9BQ13459 2157 aa14.04□□□□□ -0.16
SSH1-206ENST00000547381 SMIM35A0A1B0GVV1 85 aa14.03□□□□□ -0.16
SSH1-206ENST00000547381 WDR64B1ANS9 1081 aa14.03□□□□□ -0.16
SSH1-206ENST00000547381 MSH4O15457 936 aa14.03□□□□□ -0.16
SSH1-206ENST00000547381 IGFBP4P22692 258 aa14.03□□□□□ -0.16
SSH1-206ENST00000547381 SFNP31947 248 aa14.03□□□□□ -0.16
SSH1-206ENST00000547381 MRPS6P82932 125 aaKnown RBP14.03□□□□□ -0.16
SSH1-206ENST00000547381 MGAT3Q09327 533 aa14.03□□□□□ -0.16
SSH1-206ENST00000547381 MKRN4PQ13434 485 aaPredicted RBP14.03□□□□□ -0.16
SSH1-206ENST00000547381 NONOQ15233 471 aaKnown RBP eCLIP14.03□□□□□ -0.16
SSH1-206ENST00000547381 NPY5RQ15761 445 aa14.03□□□□□ -0.16
SSH1-206ENST00000547381 MTHFD1LQ6UB35 978 aa14.03□□□□□ -0.16
SSH1-206ENST00000547381 MOXD1Q6UVY6 613 aa14.03□□□□□ -0.16
SSH1-206ENST00000547381 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.03□□□□□ -0.16
SSH1-206ENST00000547381 FAM43BQ6ZT52 329 aaPredicted RBP14.03□□□□□ -0.16
SSH1-206ENST00000547381 CCDC60Q8IWA6 550 aaPredicted RBP14.03□□□□□ -0.16
SSH1-206ENST00000547381 CKAP2LQ8IYA6 745 aa14.03□□□□□ -0.16
SSH1-206ENST00000547381 MYOCDQ8IZQ8 938 aa14.03□□□□□ -0.16
SSH1-206ENST00000547381 USP38Q8NB14 1042 aa14.03□□□□□ -0.16
SSH1-206ENST00000547381 BBXQ8WY36 941 aaPredicted RBP14.03□□□□□ -0.16
SSH1-206ENST00000547381 SLC5A5Q92911 643 aa14.03□□□□□ -0.16
SSH1-206ENST00000547381 AIFM3Q96NN9 605 aa14.03□□□□□ -0.16
SSH1-206ENST00000547381 UIMC1Q96RL1 719 aa14.03□□□□□ -0.16
SSH1-206ENST00000547381 PHF20Q9BVI0 1012 aa14.03□□□□□ -0.16
SSH1-206ENST00000547381 FAM49AQ9H0Q0 323 aaPredicted RBP14.03□□□□□ -0.16
SSH1-206ENST00000547381 ORC3Q9UBD5 711 aaPredicted RBP14.03□□□□□ -0.16
SSH1-206ENST00000547381 CEP131Q9UPN4 1083 aa14.03□□□□□ -0.16
SSH1-206ENST00000547381 COL1A2P08123 1366 aa14.03□□□□□ -0.16
SSH1-206ENST00000547381 CCDC194A0A1B0GVG4 234 aa14.02□□□□□ -0.17
SSH1-206ENST00000547381 EDIL3O43854 480 aa14.02□□□□□ -0.17
SSH1-206ENST00000547381 GAS7O60861 476 aa14.02□□□□□ -0.17
SSH1-206ENST00000547381 SEC24BO95487 1268 aa14.02□□□□□ -0.17
SSH1-206ENST00000547381 GHRP10912 638 aa14.02□□□□□ -0.17
SSH1-206ENST00000547381 KLRC1P26715 233 aa14.02□□□□□ -0.17
SSH1-206ENST00000547381 ADGRE1Q14246 886 aa14.02□□□□□ -0.17
SSH1-206ENST00000547381 LRCH2Q5VUJ6 765 aa14.02□□□□□ -0.17
SSH1-206ENST00000547381 TSHZ1Q6ZSZ6 1077 aa14.02□□□□□ -0.17
SSH1-206ENST00000547381 TMCO2Q7Z6W1 182 aaPredicted RBP14.02□□□□□ -0.17
SSH1-206ENST00000547381 GTF3C6Q969F1 213 aa14.02□□□□□ -0.17
SSH1-206ENST00000547381 FAM167AQ96KS9 214 aa14.02□□□□□ -0.17
SSH1-206ENST00000547381 TEKT3Q9BXF9 490 aa14.02□□□□□ -0.17
SSH1-206ENST00000547381 KCNJ14Q9UNX9 436 aa14.02□□□□□ -0.17
SSH1-206ENST00000547381 CDY2AQ9Y6F7 541 aa14.02□□□□□ -0.17
SSH1-206ENST00000547381 GTPBP6O43824 516 aaPredicted RBP14.01□□□□□ -0.17
SSH1-206ENST00000547381 CTDNEP1O95476 244 aa14.01□□□□□ -0.17
SSH1-206ENST00000547381 JAK3P52333 1124 aa14.01□□□□□ -0.17
SSH1-206ENST00000547381 LPIN1Q14693 890 aa14.01□□□□□ -0.17
SSH1-206ENST00000547381 ME3Q16798 604 aa14.01□□□□□ -0.17
SSH1-206ENST00000547381 FBXO47Q5MNV8 452 aa14.01□□□□□ -0.17
SSH1-206ENST00000547381 FAM117BQ6P1L5 589 aa14.01□□□□□ -0.17
SSH1-206ENST00000547381 RDM1Q8NG50 284 aa14.01□□□□□ -0.17
SSH1-206ENST00000547381 TRAPPC12Q8WVT3 735 aa14.01□□□□□ -0.17
SSH1-206ENST00000547381 ARNTL2Q8WYA1 636 aa14.01□□□□□ -0.17
SSH1-206ENST00000547381 TOP1MTQ969P6 601 aa14.01□□□□□ -0.17
SSH1-206ENST00000547381 MBOAT7Q96N66 472 aa14.01□□□□□ -0.17
SSH1-206ENST00000547381 NAP1L4Q99733 375 aaKnown RBP14.01□□□□□ -0.17
SSH1-206ENST00000547381 OSBPL7Q9BZF2 842 aa14.01□□□□□ -0.17
SSH1-206ENST00000547381 BRMS1Q9HCU9 246 aa14.01□□□□□ -0.17
SSH1-206ENST00000547381 DISC1Q9NRI5 854 aa14.01□□□□□ -0.17
SSH1-206ENST00000547381 GABBR1Q9UBS5 961 aa14.01□□□□□ -0.17
SSH1-206ENST00000547381 TRPV2Q9Y5S1 764 aa14.01□□□□□ -0.17
SSH1-206ENST00000547381 MICAL3Q7RTP6 2002 aa14.01□□□□□ -0.17
SSH1-206ENST00000547381 PTPRSQ13332 1948 aa14.01□□□□□ -0.17
SSH1-206ENST00000547381 SPTBN5Q9NRC6 3674 aaKnown RBP14□□□□□ -0.17
SSH1-206ENST00000547381 KDM3AQ9Y4C1 1321 aa14□□□□□ -0.17
SSH1-206ENST00000547381 LCHNA4D1U4 455 aa14□□□□□ -0.17
SSH1-206ENST00000547381 GCFC2P16383 781 aaKnown RBP14□□□□□ -0.17
SSH1-206ENST00000547381 POU3F3P20264 500 aaPredicted RBP14□□□□□ -0.17
SSH1-206ENST00000547381 ATP4AP20648 1035 aa14□□□□□ -0.17
SSH1-206ENST00000547381 HTRA4P83105 476 aaPredicted RBP14□□□□□ -0.17
SSH1-206ENST00000547381 NECAB1Q8N987 351 aa14□□□□□ -0.17
SSH1-206ENST00000547381 ZBTB10Q96DT7 871 aa14□□□□□ -0.17
SSH1-206ENST00000547381 TGS1Q96RS0 853 aaKnown RBP14□□□□□ -0.17
SSH1-206ENST00000547381 YME1L1Q96TA2 773 aa14□□□□□ -0.17
SSH1-206ENST00000547381 FTHL17Q9BXU8 183 aa14□□□□□ -0.17
SSH1-206ENST00000547381 CELF4Q9BZC1 486 aaKnown RBP14□□□□□ -0.17
SSH1-206ENST00000547381 CERS4Q9HA82 394 aa14□□□□□ -0.17
SSH1-206ENST00000547381 NRBP2Q9NSY0 501 aa14□□□□□ -0.17
SSH1-206ENST00000547381 DDX25Q9UHL0 483 aaKnown RBP14□□□□□ -0.17
SSH1-206ENST00000547381 MYH9P35579 1960 aaKnown RBP14□□□□□ -0.17
SSH1-206ENST00000547381 IGSF9BQ9UPX0 1349 aa13.99□□□□□ -0.17
SSH1-206ENST00000547381 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.99□□□□□ -0.17
SSH1-206ENST00000547381 LINC01553A4QN01 128 aa13.99□□□□□ -0.17
SSH1-206ENST00000547381 ZBTB42B2RXF5 422 aa13.99□□□□□ -0.17
SSH1-206ENST00000547381 MAGEB2O15479 319 aa13.99□□□□□ -0.17
SSH1-206ENST00000547381 PSMD10O75832 226 aa13.99□□□□□ -0.17
SSH1-206ENST00000547381 TDP2O95551 362 aa13.99□□□□□ -0.17
SSH1-206ENST00000547381 ERVK-21P61565 698 aa13.99□□□□□ -0.17
SSH1-206ENST00000547381 INF2Q27J81 1249 aa13.99□□□□□ -0.17
SSH1-206ENST00000547381 LETM2Q2VYF4 491 aa13.99□□□□□ -0.17
SSH1-206ENST00000547381 PPP4R3AQ6IN85 833 aa13.99□□□□□ -0.17
SSH1-206ENST00000547381 NEK8Q86SG6 692 aa13.99□□□□□ -0.17
SSH1-206ENST00000547381 KIAA0319LQ8IZA0 1049 aa13.99□□□□□ -0.17
SSH1-206ENST00000547381 ZNF710Q8N1W2 664 aa13.99□□□□□ -0.17
SSH1-206ENST00000547381 ETNPPLQ8TBG4 499 aa13.99□□□□□ -0.17
SSH1-206ENST00000547381 SP7Q8TDD2 431 aaPredicted RBP13.99□□□□□ -0.17
SSH1-206ENST00000547381 FAM20AQ96MK3 541 aa13.99□□□□□ -0.17
SSH1-206ENST00000547381 TSPYL2Q9H2G4 693 aaPredicted RBP13.99□□□□□ -0.17
SSH1-206ENST00000547381 UNC45AQ9H3U1 944 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms