RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 QARSP47897 775 aaKnown RBP16.26■□□□□ 0.19
DDX54-203ENST00000546869 ZNF200P98182 395 aaPredicted RBP16.26■□□□□ 0.19
DDX54-203ENST00000546869 ATP2C1P98194 919 aaPredicted RBP16.26■□□□□ 0.19
DDX54-203ENST00000546869 NBR1Q14596 966 aa16.26■□□□□ 0.19
DDX54-203ENST00000546869 TRIM71Q2Q1W2 868 aaKnown RBP16.26■□□□□ 0.19
DDX54-203ENST00000546869 ARL6IP4Q66PJ3 421 aaKnown RBP16.26■□□□□ 0.19
DDX54-203ENST00000546869 FERMT3Q86UX7 667 aa16.26■□□□□ 0.19
DDX54-203ENST00000546869 C4orf19Q8IY42 314 aa16.26■□□□□ 0.19
DDX54-203ENST00000546869 TMEM199Q8N511 208 aa16.26■□□□□ 0.19
DDX54-203ENST00000546869 LBHD1Q9BQE6 289 aaPredicted RBP16.26■□□□□ 0.19
DDX54-203ENST00000546869 PRO3102Q9H379 93 aa16.26■□□□□ 0.19
DDX54-203ENST00000546869 STK24Q9Y6E0 443 aa16.26■□□□□ 0.19
DDX54-203ENST00000546869 ZBTB42B2RXF5 422 aa16.25■□□□□ 0.19
DDX54-203ENST00000546869 SLITRK3O94933 977 aa16.25■□□□□ 0.19
DDX54-203ENST00000546869 OATP04181 439 aa16.25■□□□□ 0.19
DDX54-203ENST00000546869 MUTP22033 750 aa16.25■□□□□ 0.19
DDX54-203ENST00000546869 MAGEA10P43363 369 aaPredicted RBP16.25■□□□□ 0.19
DDX54-203ENST00000546869 UGCGQ16739 394 aa16.25■□□□□ 0.19
DDX54-203ENST00000546869 TMEM266Q2M3C6 531 aa16.25■□□□□ 0.19
DDX54-203ENST00000546869 NCAPH2Q6IBW4 605 aa16.25■□□□□ 0.19
DDX54-203ENST00000546869 CKAP2LQ8IYA6 745 aa16.25■□□□□ 0.19
DDX54-203ENST00000546869 IGSF22Q8N9C0 903 aa16.25■□□□□ 0.19
DDX54-203ENST00000546869 RETREG2Q8NC44 543 aa16.25■□□□□ 0.19
DDX54-203ENST00000546869 DHX38Q92620 1227 aaKnown RBP16.25■□□□□ 0.19
DDX54-203ENST00000546869 BADQ92934 168 aa16.25■□□□□ 0.19
DDX54-203ENST00000546869 RAB34Q9BZG1 259 aa16.25■□□□□ 0.19
DDX54-203ENST00000546869 ZSWIM4Q9H7M6 989 aa16.25■□□□□ 0.19
DDX54-203ENST00000546869 TUBE1Q9UJT0 475 aa16.25■□□□□ 0.19
DDX54-203ENST00000546869 PPME1Q9Y570 386 aa16.25■□□□□ 0.19
DDX54-203ENST00000546869 PCDHA2Q9Y5H9 948 aa16.25■□□□□ 0.19
DDX54-203ENST00000546869 MORC2Q9Y6X9 1032 aaPredicted RBP16.25■□□□□ 0.19
DDX54-203ENST00000546869 SMIM35A0A1B0GVV1 85 aa16.24■□□□□ 0.19
DDX54-203ENST00000546869 MAGEB2O15479 319 aa16.24■□□□□ 0.19
DDX54-203ENST00000546869 XRCC6P12956 609 aaKnown RBP eCLIP16.24■□□□□ 0.19
DDX54-203ENST00000546869 RFC2P35250 354 aa16.24■□□□□ 0.19
DDX54-203ENST00000546869 TECP42680 631 aa16.24■□□□□ 0.19
DDX54-203ENST00000546869 PRKCEQ02156 737 aa16.24■□□□□ 0.19
DDX54-203ENST00000546869 TARBP2Q15633 366 aaKnown RBP16.24■□□□□ 0.19
DDX54-203ENST00000546869 MTHFD1LQ6UB35 978 aa16.24■□□□□ 0.19
DDX54-203ENST00000546869 DTHD1Q6ZMT9 781 aa16.24■□□□□ 0.19
DDX54-203ENST00000546869 NME8Q8N427 588 aa16.24■□□□□ 0.19
DDX54-203ENST00000546869 EIF2AK1Q9BQI3 630 aaKnown RBP16.24■□□□□ 0.19
DDX54-203ENST00000546869 POLR3CQ9BUI4 534 aaPredicted RBP16.24■□□□□ 0.19
DDX54-203ENST00000546869 DNAH12Q6ZR08 3092 aa16.24■□□□□ 0.19
DDX54-203ENST00000546869 IQCF3P0C7M6 154 aa16.23■□□□□ 0.19
DDX54-203ENST00000546869 ZSCAN22P10073 491 aaPredicted RBP16.23■□□□□ 0.19
DDX54-203ENST00000546869 CKBP12277 381 aa16.23■□□□□ 0.19
DDX54-203ENST00000546869 SELPP16109 830 aa16.23■□□□□ 0.19
DDX54-203ENST00000546869 CYP2C18P33260 490 aa16.23■□□□□ 0.19
DDX54-203ENST00000546869 FPGSQ05932 587 aa16.23■□□□□ 0.19
DDX54-203ENST00000546869 PPIGQ13427 754 aaKnown RBP eCLIP16.23■□□□□ 0.191e-7■□□□□ 9.9
DDX54-203ENST00000546869 FAM26DQ5JW98 314 aa16.23■□□□□ 0.19
DDX54-203ENST00000546869 EXOC8Q8IYI6 725 aa16.23■□□□□ 0.19
DDX54-203ENST00000546869 BANK1Q8NDB2 785 aa16.23■□□□□ 0.19
DDX54-203ENST00000546869 ERMNQ8TAM6 284 aa16.23■□□□□ 0.19
DDX54-203ENST00000546869 DYDC2Q96IM9 177 aa16.23■□□□□ 0.19
DDX54-203ENST00000546869 CEP89Q96ST8 783 aa16.23■□□□□ 0.19
DDX54-203ENST00000546869 LXNQ9BS40 222 aa16.23■□□□□ 0.19
DDX54-203ENST00000546869 PPP1R12CQ9BZL4 782 aa16.23■□□□□ 0.19
DDX54-203ENST00000546869 WNT8AQ9H1J5 351 aa16.23■□□□□ 0.19
DDX54-203ENST00000546869 TUFT1Q9NNX1 390 aa16.23■□□□□ 0.19
DDX54-203ENST00000546869 UMODL1Q5DID0 1318 aa16.22■□□□□ 0.19
DDX54-203ENST00000546869 A0A1W2PPC1 479 aa16.22■□□□□ 0.19
DDX54-203ENST00000546869 POTEMA6NI47 508 aa16.22■□□□□ 0.19
DDX54-203ENST00000546869 PFKMP08237 780 aa16.22■□□□□ 0.19
DDX54-203ENST00000546869 SPATA31C1P0DKV0 1188 aa16.22■□□□□ 0.19
DDX54-203ENST00000546869 KLRC1P26715 233 aa16.22■□□□□ 0.19
DDX54-203ENST00000546869 RPA1P27694 616 aa16.22■□□□□ 0.19
DDX54-203ENST00000546869 MDM2Q00987 491 aaPredicted RBP16.22■□□□□ 0.19
DDX54-203ENST00000546869 SF3A1Q15459 793 aaKnown RBP16.22■□□□□ 0.19
DDX54-203ENST00000546869 IL17AQ16552 155 aa16.22■□□□□ 0.19
DDX54-203ENST00000546869 TRAF7Q6Q0C0 670 aa16.22■□□□□ 0.19
DDX54-203ENST00000546869 ANO5Q75V66 913 aa16.22■□□□□ 0.19
DDX54-203ENST00000546869 OTUD6AQ7L8S5 288 aa16.22■□□□□ 0.19
DDX54-203ENST00000546869 RSPH3Q86UC2 560 aa16.22■□□□□ 0.19
DDX54-203ENST00000546869 RPUSD2Q8IZ73 545 aaKnown RBP16.22■□□□□ 0.19
DDX54-203ENST00000546869 ZNF710Q8N1W2 664 aa16.22■□□□□ 0.19
DDX54-203ENST00000546869 KCTD17Q8N5Z5 321 aa16.22■□□□□ 0.19
DDX54-203ENST00000546869 SPRYD3Q8NCJ5 442 aa16.22■□□□□ 0.19
DDX54-203ENST00000546869 WNT8BQ93098 351 aa16.22■□□□□ 0.19
DDX54-203ENST00000546869 RGL1Q9NZL6 768 aa16.22■□□□□ 0.19
DDX54-203ENST00000546869 WRAP73Q9P2S5 460 aaPredicted RBP16.22■□□□□ 0.19
DDX54-203ENST00000546869 LRWD1Q9UFC0 647 aa16.22■□□□□ 0.19
DDX54-203ENST00000546869 IGKV6-21A0A0C4DH24 114 aa16.21■□□□□ 0.19
DDX54-203ENST00000546869 DDX11L8A8MPP1 907 aa16.21■□□□□ 0.19
DDX54-203ENST00000546869 C22orf31O95567 290 aa16.21■□□□□ 0.19
DDX54-203ENST00000546869 F13A1P00488 732 aa16.21■□□□□ 0.19
DDX54-203ENST00000546869 CSF2RAP15509 400 aa16.21■□□□□ 0.19
DDX54-203ENST00000546869 IGBP1P78318 339 aa16.21■□□□□ 0.19
DDX54-203ENST00000546869 PTPAQ15257 358 aa16.21■□□□□ 0.19
DDX54-203ENST00000546869 ZNF618Q5T7W0 954 aa16.21■□□□□ 0.19
DDX54-203ENST00000546869 HAUS3Q68CZ6 603 aa16.21■□□□□ 0.19
DDX54-203ENST00000546869 ATL3Q6DD88 541 aa16.21■□□□□ 0.19
DDX54-203ENST00000546869 FAM43BQ6ZT52 329 aaPredicted RBP16.21■□□□□ 0.19
DDX54-203ENST00000546869 LRRC8DQ7L1W4 858 aa16.21■□□□□ 0.19
DDX54-203ENST00000546869 CATSPER3Q86XQ3 398 aa16.21■□□□□ 0.19
DDX54-203ENST00000546869 TPH2Q8IWU9 490 aa16.21■□□□□ 0.19
DDX54-203ENST00000546869 LINC01465Q8N7H1 131 aa16.21■□□□□ 0.19
DDX54-203ENST00000546869 IL23AQ9NPF7 189 aa16.21■□□□□ 0.19
DDX54-203ENST00000546869 ANKEF1Q9NU02 776 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms