RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 CFHR4Q92496 578 aa6.64□□□□□ -1.35
CCDC38-204ENST00000546816 FAM89AQ96GI7 184 aa6.64□□□□□ -1.35
CCDC38-204ENST00000546816 OR14A2Q96R54 314 aa6.64□□□□□ -1.35
CCDC38-204ENST00000546816 TRIM8Q9BZR9 551 aa6.64□□□□□ -1.35
CCDC38-204ENST00000546816 SRPK3Q9UPE1 567 aa6.64□□□□□ -1.35
CCDC38-204ENST00000546816 NR2E1Q9Y466 385 aa6.64□□□□□ -1.35
CCDC38-204ENST00000546816 WNT9AO14904 365 aa6.63□□□□□ -1.35
CCDC38-204ENST00000546816 STK10O94804 968 aaKnown RBP6.63□□□□□ -1.35
CCDC38-204ENST00000546816 ACRV1P26436 265 aa6.63□□□□□ -1.35
CCDC38-204ENST00000546816 IFRD2Q12894 506 aaPredicted RBP6.63□□□□□ -1.35
CCDC38-204ENST00000546816 SMN1Q16637 294 aaKnown RBP6.63□□□□□ -1.35
CCDC38-204ENST00000546816 NLGN4XQ8N0W4 816 aa6.63□□□□□ -1.35
CCDC38-204ENST00000546816 ZNF669Q96BR6 464 aaPredicted RBP6.63□□□□□ -1.35
CCDC38-204ENST00000546816 CEP89Q96ST8 783 aa6.63□□□□□ -1.35
CCDC38-204ENST00000546816 ALG1Q9BT22 464 aa6.63□□□□□ -1.35
CCDC38-204ENST00000546816 TRIM55Q9BYV6 548 aa6.63□□□□□ -1.35
CCDC38-204ENST00000546816 IKZF4Q9H2S9 585 aa6.63□□□□□ -1.35
CCDC38-204ENST00000546816 MSL2Q9HCI7 577 aa6.63□□□□□ -1.35
CCDC38-204ENST00000546816 TRAV20A0A0B4J274 112 aa6.62□□□□□ -1.35
CCDC38-204ENST00000546816 ARHGAP6O43182 974 aa6.62□□□□□ -1.35
CCDC38-204ENST00000546816 INHBEP58166 350 aa6.62□□□□□ -1.35
CCDC38-204ENST00000546816 IL13RA1P78552 427 aa6.62□□□□□ -1.35
CCDC38-204ENST00000546816 WDR72Q3MJ13 1102 aa6.62□□□□□ -1.35
CCDC38-204ENST00000546816 LARP4Q71RC2 724 aaKnown RBP eCLIP6.62□□□□□ -1.35
CCDC38-204ENST00000546816 CXXC5Q7LFL8 322 aaKnown RBP6.62□□□□□ -1.35
CCDC38-204ENST00000546816 CKAP2LQ8IYA6 745 aa6.62□□□□□ -1.35
CCDC38-204ENST00000546816 LRRC47Q8N1G4 583 aaKnown RBP6.62□□□□□ -1.35
CCDC38-204ENST00000546816 ZNF808Q8N4W9 903 aaPredicted RBP6.62□□□□□ -1.35
CCDC38-204ENST00000546816 PDPK1O15530 556 aa6.61□□□□□ -1.35
CCDC38-204ENST00000546816 AMY2AP04746 511 aa6.61□□□□□ -1.35
CCDC38-204ENST00000546816 AMY2BP19961 511 aa6.61□□□□□ -1.35
CCDC38-204ENST00000546816 RPS19P39019 145 aaKnown RBP6.61□□□□□ -1.35
CCDC38-204ENST00000546816 FOXL1Q12952 345 aa6.61□□□□□ -1.35
CCDC38-204ENST00000546816 EIF4HQ15056 248 aaKnown RBP6.61□□□□□ -1.35
CCDC38-204ENST00000546816 STILQ15468 1287 aa6.61□□□□□ -1.35
CCDC38-204ENST00000546816 GPR19Q15760 415 aa6.61□□□□□ -1.35
CCDC38-204ENST00000546816 ARHGAP36Q6ZRI8 547 aa6.61□□□□□ -1.35
CCDC38-204ENST00000546816 DPH6Q7L8W6 267 aa6.61□□□□□ -1.35
CCDC38-204ENST00000546816 SPATA9Q9BWV2 254 aa6.61□□□□□ -1.35
CCDC38-204ENST00000546816 RIC8BQ9NVN3 520 aa6.61□□□□□ -1.35
CCDC38-204ENST00000546816 ARHGAP28Q9P2N2 729 aa6.61□□□□□ -1.35
CCDC38-204ENST00000546816 TRAF6Q9Y4K3 522 aa6.61□□□□□ -1.35
CCDC38-204ENST00000546816 MAN2B1O00754 1011 aa6.6□□□□□ -1.35
CCDC38-204ENST00000546816 ADCY3O60266 1144 aa6.6□□□□□ -1.35
CCDC38-204ENST00000546816 PTGS1P23219 599 aa6.6□□□□□ -1.35
CCDC38-204ENST00000546816 PAK1Q13153 545 aa6.6□□□□□ -1.35
CCDC38-204ENST00000546816 RASGRF1Q13972 1273 aa6.6□□□□□ -1.35
CCDC38-204ENST00000546816 FNDC7Q5VTL7 733 aa6.6□□□□□ -1.35
CCDC38-204ENST00000546816 WNK4Q96J92 1243 aa6.6□□□□□ -1.35
CCDC38-204ENST00000546816 PLEKHG4BQ96PX9 1271 aa6.6□□□□□ -1.35
CCDC38-204ENST00000546816 TANGO6Q9C0B7 1094 aa6.6□□□□□ -1.35
CCDC38-204ENST00000546816 KIAA1683Q9H0B3 1180 aa6.6□□□□□ -1.35
CCDC38-204ENST00000546816 CCDC113Q9H0I3 377 aa6.6□□□□□ -1.35
CCDC38-204ENST00000546816 C12orf65Q9H3J6 166 aaKnown RBP6.6□□□□□ -1.35
CCDC38-204ENST00000546816 INCENPQ9NQS7 918 aa6.6□□□□□ -1.35
CCDC38-204ENST00000546816 GALNT8Q9NY28 637 aa6.6□□□□□ -1.35
CCDC38-204ENST00000546816 BTBD7Q9P203 1132 aa6.6□□□□□ -1.35
CCDC38-204ENST00000546816 PUF60Q9UHX1 559 aaKnown RBP6.6□□□□□ -1.35
CCDC38-204ENST00000546816 FBXO10Q9UK96 956 aa6.6□□□□□ -1.35
CCDC38-204ENST00000546816 U2SURPO15042 1029 aaKnown RBP6.59□□□□□ -1.35
CCDC38-204ENST00000546816 HMGCRP04035 888 aa6.59□□□□□ -1.35
CCDC38-204ENST00000546816 ATP2B1P20020 1258 aa6.59□□□□□ -1.35
CCDC38-204ENST00000546816 AOAHP28039 575 aa6.59□□□□□ -1.35
CCDC38-204ENST00000546816 GJA4P35212 333 aa6.59□□□□□ -1.35
CCDC38-204ENST00000546816 KCNQ1P51787 676 aa6.59□□□□□ -1.35
CCDC38-204ENST00000546816 FIGNQ5HY92 759 aa6.59□□□□□ -1.35
CCDC38-204ENST00000546816 TRIM68Q6AZZ1 485 aa6.59□□□□□ -1.35
CCDC38-204ENST00000546816 USP30Q70CQ3 517 aa6.59□□□□□ -1.35
CCDC38-204ENST00000546816 ZNF703Q9H7S9 590 aaPredicted RBP6.59□□□□□ -1.35
CCDC38-204ENST00000546816 ATP23Q9Y6H3 246 aa6.59□□□□□ -1.35
CCDC38-204ENST00000546816 MPIG6BO95866 241 aa6.58□□□□□ -1.36
CCDC38-204ENST00000546816 C4BPAP04003 597 aaKnown RBP6.58□□□□□ -1.36
CCDC38-204ENST00000546816 MSX2P35548 267 aaPredicted RBP6.58□□□□□ -1.36
CCDC38-204ENST00000546816 ADCY8P40145 1251 aa6.58□□□□□ -1.36
CCDC38-204ENST00000546816 NBPF6Q5VWK0 638 aa6.58□□□□□ -1.36
CCDC38-204ENST00000546816 FOXB2Q5VYV0 432 aa6.58□□□□□ -1.36
CCDC38-204ENST00000546816 ZNF575Q86XF7 245 aa6.58□□□□□ -1.36
CCDC38-204ENST00000546816 PTRH1Q86Y79 214 aaKnown RBP6.58□□□□□ -1.36
CCDC38-204ENST00000546816 NEU4Q8WWR8 484 aaPredicted RBP6.58□□□□□ -1.36
CCDC38-204ENST00000546816 NBPF4Q96M43 638 aa6.58□□□□□ -1.36
CCDC38-204ENST00000546816 C8orf37Q96NL8 207 aa6.58□□□□□ -1.36
CCDC38-204ENST00000546816 PLA2G3Q9NZ20 509 aa6.58□□□□□ -1.36
CCDC38-204ENST00000546816 PDE6AP16499 860 aa6.57□□□□□ -1.36
CCDC38-204ENST00000546816 MC4RP32245 332 aa6.57□□□□□ -1.36
CCDC38-204ENST00000546816 INHBCP55103 352 aa6.57□□□□□ -1.36
CCDC38-204ENST00000546816 TUBA3CQ13748 450 aa6.57□□□□□ -1.36
CCDC38-204ENST00000546816 TUBA3EQ6PEY2 450 aa6.57□□□□□ -1.36
CCDC38-204ENST00000546816 OSTM1Q86WC4 334 aa6.57□□□□□ -1.36
CCDC38-204ENST00000546816 LDLRAD3Q86YD5 345 aa6.57□□□□□ -1.36
CCDC38-204ENST00000546816 SCUBE1Q8IWY4 988 aa6.57□□□□□ -1.36
CCDC38-204ENST00000546816 GPR135Q8IZ08 494 aa6.57□□□□□ -1.36
CCDC38-204ENST00000546816 PCDH19Q8TAB3 1148 aa6.57□□□□□ -1.36
CCDC38-204ENST00000546816 FBXW5Q969U6 566 aa6.57□□□□□ -1.36
CCDC38-204ENST00000546816 BTBD2Q9BX70 525 aa6.57□□□□□ -1.36
CCDC38-204ENST00000546816 AMNQ9BXJ7 453 aa6.57□□□□□ -1.36
CCDC38-204ENST00000546816 TLR9Q9NR96 1032 aa6.57□□□□□ -1.36
CCDC38-204ENST00000546816 PFDN2Q9UHV9 154 aa6.57□□□□□ -1.36
CCDC38-204ENST00000546816 CBLCQ9ULV8 474 aa6.57□□□□□ -1.36
CCDC38-204ENST00000546816 CCDC85CA6NKD9 419 aa6.56□□□□□ -1.36
CCDC38-204ENST00000546816 AQP7O14520 342 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms