RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 GJC2Q5T442 439 aaPredicted RBP13.22□□□□□ -0.29
CCDC38-202ENST00000546386 NYAP1Q6ZVC0 841 aa13.22□□□□□ -0.29
CCDC38-202ENST00000546386 MCF2L2Q86YR7 1114 aa13.22□□□□□ -0.29
CCDC38-202ENST00000546386 GUF1Q8N442 669 aaKnown RBP13.22□□□□□ -0.29
CCDC38-202ENST00000546386 REPS2Q8NFH8 660 aa13.22□□□□□ -0.29
CCDC38-202ENST00000546386 COL11A1P12107 1806 aaPredicted RBP13.21□□□□□ -0.29
CCDC38-202ENST00000546386 BACH1O14867 736 aa13.21□□□□□ -0.29
CCDC38-202ENST00000546386 AKAP3O75969 853 aa13.21□□□□□ -0.29
CCDC38-202ENST00000546386 MYL1P05976 194 aa13.21□□□□□ -0.29
CCDC38-202ENST00000546386 IRX3P78415 501 aaPredicted RBP13.21□□□□□ -0.29
CCDC38-202ENST00000546386 GRM1Q13255 1194 aa13.21□□□□□ -0.29
CCDC38-202ENST00000546386 HYIQ5T013 277 aa13.21□□□□□ -0.29
CCDC38-202ENST00000546386 FAM102BQ5T8I3 360 aa13.21□□□□□ -0.29
CCDC38-202ENST00000546386 PADI6Q6TGC4 694 aa13.21□□□□□ -0.29
CCDC38-202ENST00000546386 C1orf186Q6ZWK4 172 aa13.21□□□□□ -0.29
CCDC38-202ENST00000546386 CCDC43Q96MW1 224 aaKnown RBP13.21□□□□□ -0.29
CCDC38-202ENST00000546386 TEX13BQ9BXU2 312 aa13.21□□□□□ -0.29
CCDC38-202ENST00000546386 KCTD10Q9H3F6 313 aa13.21□□□□□ -0.29
CCDC38-202ENST00000546386 MAGEF1Q9HAY2 307 aa13.21□□□□□ -0.29
CCDC38-202ENST00000546386 LUC7L2Q9Y383 392 aaKnown RBP13.21□□□□□ -0.29
CCDC38-202ENST00000546386 GOLGA8IPA6NC78 632 aa13.21□□□□□ -0.3
CCDC38-202ENST00000546386 GOLGA8JA6NMD2 632 aa13.21□□□□□ -0.3
CCDC38-202ENST00000546386 TBX3O15119 743 aa13.21□□□□□ -0.3
CCDC38-202ENST00000546386 URI1O94763 535 aaPredicted RBP13.21□□□□□ -0.3
CCDC38-202ENST00000546386 EYA4O95677 639 aa13.21□□□□□ -0.3
CCDC38-202ENST00000546386 MARK3P27448 753 aa13.21□□□□□ -0.3
CCDC38-202ENST00000546386 PPP2R5CQ13362 524 aa13.21□□□□□ -0.3
CCDC38-202ENST00000546386 VWA3BQ502W6 1294 aa13.21□□□□□ -0.3
CCDC38-202ENST00000546386 XKR9Q5GH70 373 aa13.21□□□□□ -0.3
CCDC38-202ENST00000546386 WDR59Q6PJI9 974 aa13.21□□□□□ -0.3
CCDC38-202ENST00000546386 MOXD1Q6UVY6 613 aa13.21□□□□□ -0.3
CCDC38-202ENST00000546386 RRAGAQ7L523 313 aa13.21□□□□□ -0.3
CCDC38-202ENST00000546386 DAW1Q8N136 415 aa13.21□□□□□ -0.3
CCDC38-202ENST00000546386 HINFPQ9BQA5 517 aa13.21□□□□□ -0.3
CCDC38-202ENST00000546386 GABBR1Q9UBS5 961 aa13.21□□□□□ -0.3
CCDC38-202ENST00000546386 SBF1O95248 1867 aa13.2□□□□□ -0.3
CCDC38-202ENST00000546386 ENC1O14682 589 aa13.2□□□□□ -0.3
CCDC38-202ENST00000546386 YWHABP31946 246 aaKnown RBP13.2□□□□□ -0.3
CCDC38-202ENST00000546386 PCNX4Q63HM2 1172 aa13.2□□□□□ -0.3
CCDC38-202ENST00000546386 FAM178BQ8IXR5 827 aa13.2□□□□□ -0.3
CCDC38-202ENST00000546386 NAP1L4Q99733 375 aaKnown RBP13.2□□□□□ -0.3
CCDC38-202ENST00000546386 ASCC2Q9H1I8 757 aaPredicted RBP13.2□□□□□ -0.3
CCDC38-202ENST00000546386 JADE2Q9NQC1 790 aa13.2□□□□□ -0.3
CCDC38-202ENST00000546386 GUCA1BQ9UMX6 200 aa13.2□□□□□ -0.3
CCDC38-202ENST00000546386 SLC16A4O15374 487 aa13.2□□□□□ -0.3
CCDC38-202ENST00000546386 ARHGAP6O43182 974 aa13.2□□□□□ -0.3
CCDC38-202ENST00000546386 NRDCO43847 1150 aa13.2□□□□□ -0.3
CCDC38-202ENST00000546386 PLA2G6O60733 806 aa13.2□□□□□ -0.3
CCDC38-202ENST00000546386 TRIM49P0CI25 452 aa13.2□□□□□ -0.3
CCDC38-202ENST00000546386 TRIM49CP0CI26 452 aa13.2□□□□□ -0.3
CCDC38-202ENST00000546386 SLC9A1P19634 815 aa13.2□□□□□ -0.3
CCDC38-202ENST00000546386 EEF1GP26641 437 aaKnown RBP13.2□□□□□ -0.3
CCDC38-202ENST00000546386 GJA5P36382 358 aa13.2□□□□□ -0.3
CCDC38-202ENST00000546386 PEX3P56589 373 aa13.2□□□□□ -0.3
CCDC38-202ENST00000546386 LY6KQ17RY6 165 aa13.2□□□□□ -0.3
CCDC38-202ENST00000546386 TRIM50Q86XT4 487 aa13.2□□□□□ -0.3
CCDC38-202ENST00000546386 ZNF215Q9UL58 517 aaPredicted RBP13.2□□□□□ -0.3
CCDC38-202ENST00000546386 PAXBP1Q9Y5B6 917 aa13.2□□□□□ -0.3
CCDC38-202ENST00000546386 UBIAD1Q9Y5Z9 338 aa13.2□□□□□ -0.3
CCDC38-202ENST00000546386 CCDC169A6NNP5 214 aa13.19□□□□□ -0.3
CCDC38-202ENST00000546386 DNA2P51530 1060 aa13.19□□□□□ -0.3
CCDC38-202ENST00000546386 FKBP3Q00688 224 aaKnown RBP13.19□□□□□ -0.3
CCDC38-202ENST00000546386 SPAG1Q07617 926 aa13.19□□□□□ -0.3
CCDC38-202ENST00000546386 TRIM65Q6PJ69 517 aa13.19□□□□□ -0.3
CCDC38-202ENST00000546386 VSIG10LQ86VR7 867 aa13.19□□□□□ -0.3
CCDC38-202ENST00000546386 SYCP3Q8IZU3 236 aa13.19□□□□□ -0.3
CCDC38-202ENST00000546386 CCDC112Q8NEF3 446 aa13.19□□□□□ -0.3
CCDC38-202ENST00000546386 DRC1Q96MC2 740 aa13.19□□□□□ -0.3
CCDC38-202ENST00000546386 PPP1R16BQ96T49 567 aa13.19□□□□□ -0.3
CCDC38-202ENST00000546386 TSG101Q99816 390 aa13.19□□□□□ -0.3
CCDC38-202ENST00000546386 EHMT1Q9H9B1 1298 aa13.19□□□□□ -0.3
CCDC38-202ENST00000546386 HOXC10Q9NYD6 342 aa13.19□□□□□ -0.3
CCDC38-202ENST00000546386 SYNPO2Q9UMS6 1093 aa13.19□□□□□ -0.3
CCDC38-202ENST00000546386 RCCD1A6NED2 376 aa13.19□□□□□ -0.3
CCDC38-202ENST00000546386 ZNF862O60290 1169 aa13.19□□□□□ -0.3
CCDC38-202ENST00000546386 STX10O60499 249 aa13.19□□□□□ -0.3
CCDC38-202ENST00000546386 TPM1P09493 284 aa13.19□□□□□ -0.3
CCDC38-202ENST00000546386 POLR2FP61218 127 aaKnown RBP13.19□□□□□ -0.3
CCDC38-202ENST00000546386 KCNMA1Q12791 1236 aa13.19□□□□□ -0.3
CCDC38-202ENST00000546386 KNOP1Q1ED39 458 aaKnown RBP13.19□□□□□ -0.3
CCDC38-202ENST00000546386 ZCWPW2Q504Y3 356 aa13.19□□□□□ -0.3
CCDC38-202ENST00000546386 ANO5Q75V66 913 aa13.19□□□□□ -0.3
CCDC38-202ENST00000546386 NLRX1Q86UT6 975 aa13.19□□□□□ -0.3
CCDC38-202ENST00000546386 POLR3CQ9BUI4 534 aaPredicted RBP13.19□□□□□ -0.3
CCDC38-202ENST00000546386 ACAD9Q9H845 621 aa13.19□□□□□ -0.3
CCDC38-202ENST00000546386 EFCC1Q9HA90 598 aa13.19□□□□□ -0.3
CCDC38-202ENST00000546386 PARVGQ9HBI0 331 aa13.19□□□□□ -0.3
CCDC38-202ENST00000546386 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.19□□□□□ -0.3
CCDC38-202ENST00000546386 COL4A3BPQ9Y5P4 624 aa13.19□□□□□ -0.3
CCDC38-202ENST00000546386 ADGRG1Q9Y653 693 aa13.19□□□□□ -0.3
CCDC38-202ENST00000546386 LRRC53A6NM62 1247 aa13.18□□□□□ -0.3
CCDC38-202ENST00000546386 K7ENM7 598 aa13.18□□□□□ -0.3
CCDC38-202ENST00000546386 TGFB1I1O43294 461 aa13.18□□□□□ -0.3
CCDC38-202ENST00000546386 IREB2P48200 963 aaKnown RBP13.18□□□□□ -0.3
CCDC38-202ENST00000546386 DNM2P50570 870 aa13.18□□□□□ -0.3
CCDC38-202ENST00000546386 CCDC60Q8IWA6 550 aaPredicted RBP13.18□□□□□ -0.3
CCDC38-202ENST00000546386 COPS5Q92905 334 aa13.18□□□□□ -0.3
CCDC38-202ENST00000546386 NACC1Q96RE7 527 aa13.18□□□□□ -0.3
CCDC38-202ENST00000546386 PSMB7Q99436 277 aa13.18□□□□□ -0.3
CCDC38-202ENST00000546386 PORCNQ9H237 461 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms