RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 TNNC1P63316 161 aa16.02■□□□□ 0.16
HOXC11-202ENST00000546378 TNIP1Q15025 636 aa16.02■□□□□ 0.16
HOXC11-202ENST00000546378 FLAD1Q8NFF5 587 aa16.02■□□□□ 0.16
HOXC11-202ENST00000546378 PCDHA12Q9UN75 941 aa16.02■□□□□ 0.16
HOXC11-202ENST00000546378 ATMINO43313 823 aaPredicted RBP16.02■□□□□ 0.15
HOXC11-202ENST00000546378 GRB10Q13322 594 aa16.02■□□□□ 0.15
HOXC11-202ENST00000546378 ZYXQ15942 572 aaKnown RBP16.02■□□□□ 0.15
HOXC11-202ENST00000546378 FAM84AQ96KN4 292 aa16.02■□□□□ 0.15
HOXC11-202ENST00000546378 NCAPGQ9BPX3 1015 aa16.02■□□□□ 0.15
HOXC11-202ENST00000546378 ODF2LQ9ULJ1 636 aa16.02■□□□□ 0.15
HOXC11-202ENST00000546378 MYH6P13533 1939 aa16.02■□□□□ 0.15
HOXC11-202ENST00000546378 A0A1W2PQC6 194 aa16.01■□□□□ 0.15
HOXC11-202ENST00000546378 RSPH10B2B2RC85 870 aa16.01■□□□□ 0.15
HOXC11-202ENST00000546378 TLR2O60603 784 aa16.01■□□□□ 0.15
HOXC11-202ENST00000546378 GCNT3O95395 438 aa16.01■□□□□ 0.15
HOXC11-202ENST00000546378 RSPH10BP0C881 870 aa16.01■□□□□ 0.15
HOXC11-202ENST00000546378 HOXA13P31271 388 aaPredicted RBP16.01■□□□□ 0.15
HOXC11-202ENST00000546378 BTDP43251 543 aa16.01■□□□□ 0.15
HOXC11-202ENST00000546378 CRY2Q49AN0 593 aa16.01■□□□□ 0.15
HOXC11-202ENST00000546378 UBAP2Q5T6F2 1119 aaKnown RBP16.01■□□□□ 0.15
HOXC11-202ENST00000546378 SEPT14Q6ZU15 432 aa16.01■□□□□ 0.15
HOXC11-202ENST00000546378 GLYCTKQ8IVS8 523 aa16.01■□□□□ 0.15
HOXC11-202ENST00000546378 WDR66Q8TBY9 1149 aa16.01■□□□□ 0.15
HOXC11-202ENST00000546378 RPGRIP1Q96KN7 1286 aa16.01■□□□□ 0.15
HOXC11-202ENST00000546378 VIPAS39Q9H9C1 493 aa16.01■□□□□ 0.15
HOXC11-202ENST00000546378 KLC4Q9NSK0 619 aa16.01■□□□□ 0.15
HOXC11-202ENST00000546378 FGFR4P22455 802 aa16.01■□□□□ 0.15
HOXC11-202ENST00000546378 ZNF76P36508 570 aa16.01■□□□□ 0.15
HOXC11-202ENST00000546378 PPP2R5AQ15172 486 aa16.01■□□□□ 0.15
HOXC11-202ENST00000546378 PDXDC1Q6P996 788 aa16.01■□□□□ 0.15
HOXC11-202ENST00000546378 CCDC84Q86UT8 332 aaPredicted RBP16.01■□□□□ 0.15
HOXC11-202ENST00000546378 CYFIP2Q96F07 1278 aa16.01■□□□□ 0.15
HOXC11-202ENST00000546378 ACP6Q9NPH0 428 aa16.01■□□□□ 0.15
HOXC11-202ENST00000546378 COL4A3BPQ9Y5P4 624 aa16.01■□□□□ 0.15
HOXC11-202ENST00000546378 MDH1P40925 334 aaKnown RBP16■□□□□ 0.15
HOXC11-202ENST00000546378 KCNJ1P48048 391 aa16■□□□□ 0.15
HOXC11-202ENST00000546378 CASP4P49662 377 aa16■□□□□ 0.15
HOXC11-202ENST00000546378 CASP5P51878 434 aa16■□□□□ 0.15
HOXC11-202ENST00000546378 KCNMA1Q12791 1236 aa16■□□□□ 0.15
HOXC11-202ENST00000546378 KCNH2Q12809 1159 aa16■□□□□ 0.15
HOXC11-202ENST00000546378 COASYQ13057 564 aa16■□□□□ 0.15
HOXC11-202ENST00000546378 PTGISQ16647 500 aa16■□□□□ 0.15
HOXC11-202ENST00000546378 C2CD6Q53TS8 623 aa16■□□□□ 0.15
HOXC11-202ENST00000546378 ALKBH5Q6P6C2 394 aaKnown RBP16■□□□□ 0.15
HOXC11-202ENST00000546378 NSMFQ6X4W1 530 aa16■□□□□ 0.15
HOXC11-202ENST00000546378 ATP6V1G3Q96LB4 118 aa16■□□□□ 0.15
HOXC11-202ENST00000546378 KCNQ5Q9NR82 932 aa16■□□□□ 0.15
HOXC11-202ENST00000546378 BARHL2Q9NY43 387 aa16■□□□□ 0.15
HOXC11-202ENST00000546378 DBR1Q9UK59 544 aaKnown RBP16■□□□□ 0.15
HOXC11-202ENST00000546378 MYH3P11055 1940 aa16■□□□□ 0.15
HOXC11-202ENST00000546378 NHSQ6T4R5 1651 aa16■□□□□ 0.15
HOXC11-202ENST00000546378 ANKRD36CQ5JPF3 1778 aa16■□□□□ 0.15
HOXC11-202ENST00000546378 TARSL2A2RTX5 802 aaKnown RBP16■□□□□ 0.15
HOXC11-202ENST00000546378 ZBTB39O15060 712 aa16■□□□□ 0.15
HOXC11-202ENST00000546378 TRIM49P0CI25 452 aa16■□□□□ 0.15
HOXC11-202ENST00000546378 TRIM49CP0CI26 452 aa16■□□□□ 0.15
HOXC11-202ENST00000546378 NPR1P16066 1061 aa16■□□□□ 0.15
HOXC11-202ENST00000546378 GNA11P29992 359 aa16■□□□□ 0.15
HOXC11-202ENST00000546378 TRIM68Q6AZZ1 485 aa16■□□□□ 0.15
HOXC11-202ENST00000546378 EMBQ6PCB8 327 aa16■□□□□ 0.15
HOXC11-202ENST00000546378 MICALCLQ6ZW33 695 aa16■□□□□ 0.15
HOXC11-202ENST00000546378 FAM167BQ9BTA0 163 aa16■□□□□ 0.15
HOXC11-202ENST00000546378 MMTAG2Q9BU76 263 aaKnown RBP16■□□□□ 0.15
HOXC11-202ENST00000546378 SLC40A1Q9NP59 571 aa16■□□□□ 0.15
HOXC11-202ENST00000546378 LUC7LQ9NQ29 371 aaKnown RBP16■□□□□ 0.15
HOXC11-202ENST00000546378 DDX25Q9UHL0 483 aaKnown RBP16■□□□□ 0.15
HOXC11-202ENST00000546378 COL1A1P02452 1464 aaPredicted RBP16■□□□□ 0.15
HOXC11-202ENST00000546378 SORBS3O60504 671 aa16■□□□□ 0.15
HOXC11-202ENST00000546378 CALCAP01258 141 aa16■□□□□ 0.15
HOXC11-202ENST00000546378 ARL6IP4Q66PJ3 421 aaKnown RBP16■□□□□ 0.15
HOXC11-202ENST00000546378 CNOT8Q9UFF9 292 aaKnown RBP16■□□□□ 0.15
HOXC11-202ENST00000546378 ANO9A1A5B4 782 aa15.99■□□□□ 0.15
HOXC11-202ENST00000546378 C21orf2O43822 256 aa15.99■□□□□ 0.15
HOXC11-202ENST00000546378 ACSL3O95573 720 aa15.99■□□□□ 0.15
HOXC11-202ENST00000546378 ALDH1B1P30837 517 aa15.99■□□□□ 0.15
HOXC11-202ENST00000546378 BANK1Q8NDB2 785 aa15.99■□□□□ 0.15
HOXC11-202ENST00000546378 FBXO41Q8TF61 875 aa15.99■□□□□ 0.15
HOXC11-202ENST00000546378 PCIF1Q9H4Z3 704 aa15.99■□□□□ 0.15
HOXC11-202ENST00000546378 NOC2LQ9Y3T9 749 aaKnown RBP15.99■□□□□ 0.15
HOXC11-202ENST00000546378 RGL2O15211 777 aa15.99■□□□□ 0.15
HOXC11-202ENST00000546378 FGFR1OPO95684 399 aaKnown RBP15.99■□□□□ 0.15
HOXC11-202ENST00000546378 PSMC6P62333 389 aa15.99■□□□□ 0.15
HOXC11-202ENST00000546378 MEA1Q16626 185 aa15.99■□□□□ 0.15
HOXC11-202ENST00000546378 PYM1Q9BRP8 204 aaKnown RBP15.99■□□□□ 0.15
HOXC11-202ENST00000546378 BLOC1S4Q9NUP1 217 aa15.99■□□□□ 0.15
HOXC11-202ENST00000546378 GRID2IPA4D2P6 1211 aa15.99■□□□□ 0.15
HOXC11-202ENST00000546378 SHBGP04278 402 aa15.99■□□□□ 0.15
HOXC11-202ENST00000546378 CDK8P49336 464 aa15.99■□□□□ 0.15
HOXC11-202ENST00000546378 ADCY7P51828 1080 aa15.99■□□□□ 0.15
HOXC11-202ENST00000546378 MYO1EQ12965 1108 aa15.99■□□□□ 0.15
HOXC11-202ENST00000546378 KIAA0825Q8IV33 1275 aa15.99■□□□□ 0.15
HOXC11-202ENST00000546378 CACNA2D3Q8IZS8 1091 aa15.99■□□□□ 0.15
HOXC11-202ENST00000546378 ZNF526Q8TF50 670 aaPredicted RBP15.99■□□□□ 0.15
HOXC11-202ENST00000546378 MASTLQ96GX5 879 aa15.99■□□□□ 0.15
HOXC11-202ENST00000546378 BTBD6Q96KE9 485 aa15.99■□□□□ 0.15
HOXC11-202ENST00000546378 CAMKK2Q96RR4 588 aa15.99■□□□□ 0.15
HOXC11-202ENST00000546378 TTYH3Q9C0H2 523 aa15.99■□□□□ 0.15
HOXC11-202ENST00000546378 EPN3Q9H201 632 aa15.99■□□□□ 0.15
HOXC11-202ENST00000546378 MYH15Q9Y2K3 1946 aa15.98■□□□□ 0.15
HOXC11-202ENST00000546378 BRWD3Q6RI45 1802 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms