RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 MIS12Q9H081 205 aa13.18□□□□□ -0.3
NPC1L1-204ENST00000546276 FBXL5Q9UKA1 691 aa13.18□□□□□ -0.3
NPC1L1-204ENST00000546276 NOC2LQ9Y3T9 749 aaKnown RBP13.18□□□□□ -0.3
NPC1L1-204ENST00000546276 USH1CQ9Y6N9 552 aa13.18□□□□□ -0.3
NPC1L1-204ENST00000546276 UTYO14607 1347 aa13.18□□□□□ -0.3
NPC1L1-204ENST00000546276 NBPF26B4DH59 902 aa13.18□□□□□ -0.3
NPC1L1-204ENST00000546276 TMOD1P28289 359 aa13.18□□□□□ -0.3
NPC1L1-204ENST00000546276 PPP2R5AQ15172 486 aa13.18□□□□□ -0.3
NPC1L1-204ENST00000546276 NBPF10Q6P3W6 841 aaKnown RBP13.18□□□□□ -0.3
NPC1L1-204ENST00000546276 NBPF15Q8N660 670 aa13.18□□□□□ -0.3
NPC1L1-204ENST00000546276 SUPT20HQ8NEM7 779 aa13.18□□□□□ -0.3
NPC1L1-204ENST00000546276 RIN2Q8WYP3 895 aaPredicted RBP13.18□□□□□ -0.3
NPC1L1-204ENST00000546276 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.18□□□□□ -0.3
NPC1L1-204ENST00000546276 FUT8Q9BYC5 575 aa13.18□□□□□ -0.3
NPC1L1-204ENST00000546276 CCSER1Q9C0I3 900 aa13.18□□□□□ -0.3
NPC1L1-204ENST00000546276 EPN3Q9H201 632 aa13.18□□□□□ -0.3
NPC1L1-204ENST00000546276 KLC4Q9NSK0 619 aa13.18□□□□□ -0.3
NPC1L1-204ENST00000546276 MAD1L1Q9Y6D9 718 aa13.18□□□□□ -0.3
NPC1L1-204ENST00000546276 MT-ND3P03897 115 aa13.18□□□□□ -0.3
NPC1L1-204ENST00000546276 MDH1P40925 334 aaKnown RBP13.18□□□□□ -0.3
NPC1L1-204ENST00000546276 TRIM28Q13263 835 aaKnown RBP13.18□□□□□ -0.3
NPC1L1-204ENST00000546276 DRP2Q13474 957 aa13.18□□□□□ -0.3
NPC1L1-204ENST00000546276 SFR1Q86XK3 245 aa13.18□□□□□ -0.3
NPC1L1-204ENST00000546276 DNAJC17Q9NVM6 304 aaKnown RBP13.18□□□□□ -0.3
NPC1L1-204ENST00000546276 LMTK3Q96Q04 1460 aa13.18□□□□□ -0.3
NPC1L1-204ENST00000546276 NPHP4O75161 1426 aaPredicted RBP13.18□□□□□ -0.3
NPC1L1-204ENST00000546276 PTPRUQ92729 1446 aa13.18□□□□□ -0.3
NPC1L1-204ENST00000546276 HDLBPQ00341 1268 aaKnown RBP13.18□□□□□ -0.3
NPC1L1-204ENST00000546276 STAG2Q8N3U4 1231 aa13.18□□□□□ -0.3
NPC1L1-204ENST00000546276 CPVLQ9H3G5 476 aa13.18□□□□□ -0.3
NPC1L1-204ENST00000546276 CCPG1Q9ULG6 757 aa13.18□□□□□ -0.3
NPC1L1-204ENST00000546276 PPP1R9AQ9ULJ8 1098 aa13.18□□□□□ -0.3
NPC1L1-204ENST00000546276 E9PMD0 336 aa13.17□□□□□ -0.3
NPC1L1-204ENST00000546276 H0YIN7 160 aa13.17□□□□□ -0.3
NPC1L1-204ENST00000546276 ORC4O43929 436 aa13.17□□□□□ -0.3
NPC1L1-204ENST00000546276 DCTN3O75935 186 aa13.17□□□□□ -0.3
NPC1L1-204ENST00000546276 RFX6Q8HWS3 928 aa13.17□□□□□ -0.3
NPC1L1-204ENST00000546276 ZBTB8OSQ8IWT0 167 aa13.17□□□□□ -0.3
NPC1L1-204ENST00000546276 CALR3Q96L12 384 aaKnown RBP13.17□□□□□ -0.3
NPC1L1-204ENST00000546276 TRIM9Q9C026 710 aa13.17□□□□□ -0.3
NPC1L1-204ENST00000546276 HPS5Q9UPZ3 1129 aa13.17□□□□□ -0.3
NPC1L1-204ENST00000546276 FAM187AA6NFU0 413 aa13.17□□□□□ -0.3
NPC1L1-204ENST00000546276 SPICE1Q8N0Z3 855 aa13.17□□□□□ -0.3
NPC1L1-204ENST00000546276 SH2D3CQ8N5H7 860 aa13.17□□□□□ -0.3
NPC1L1-204ENST00000546276 SH3RF3Q8TEJ3 882 aaPredicted RBP13.17□□□□□ -0.3
NPC1L1-204ENST00000546276 CDKL2Q92772 493 aa13.17□□□□□ -0.3
NPC1L1-204ENST00000546276 CPS1P31327 1500 aa13.17□□□□□ -0.3
NPC1L1-204ENST00000546276 TMEM191BP0C7N4 346 aa13.17□□□□□ -0.3
NPC1L1-204ENST00000546276 PRDX5P30044 214 aa13.17□□□□□ -0.3
NPC1L1-204ENST00000546276 SLC12A2P55011 1212 aa13.17□□□□□ -0.3
NPC1L1-204ENST00000546276 ALCAMQ13740 583 aa13.17□□□□□ -0.3
NPC1L1-204ENST00000546276 RINT1Q6NUQ1 792 aa13.17□□□□□ -0.3
NPC1L1-204ENST00000546276 MAP7D3Q8IWC1 876 aa13.17□□□□□ -0.3
NPC1L1-204ENST00000546276 SRBD1Q8N5C6 995 aaKnown RBP13.17□□□□□ -0.3
NPC1L1-204ENST00000546276 DDX23Q9BUQ8 820 aaKnown RBP13.17□□□□□ -0.3
NPC1L1-204ENST00000546276 AGPAT5Q9NUQ2 364 aa13.17□□□□□ -0.3
NPC1L1-204ENST00000546276 LRRIQ4A6NIV6 560 aa13.16□□□□□ -0.3
NPC1L1-204ENST00000546276 USP17L5A8MUK1 530 aa13.16□□□□□ -0.3
NPC1L1-204ENST00000546276 BMP3P12645 472 aa13.16□□□□□ -0.3
NPC1L1-204ENST00000546276 RFX5P48382 616 aaPredicted RBP13.16□□□□□ -0.3
NPC1L1-204ENST00000546276 AP3B2Q13367 1082 aa13.16□□□□□ -0.3
NPC1L1-204ENST00000546276 LARGE2Q8N3Y3 721 aa13.16□□□□□ -0.3
NPC1L1-204ENST00000546276 ANKFY1Q9P2R3 1169 aa13.16□□□□□ -0.3
NPC1L1-204ENST00000546276 MAP3K7O43318 606 aa13.16□□□□□ -0.3
NPC1L1-204ENST00000546276 ATP5HO75947 161 aa13.16□□□□□ -0.3
NPC1L1-204ENST00000546276 RHOBTB3O94955 611 aa13.16□□□□□ -0.3
NPC1L1-204ENST00000546276 ARHGAP4P98171 946 aa13.16□□□□□ -0.3
NPC1L1-204ENST00000546276 SPARCL1Q14515 664 aa13.16□□□□□ -0.3
NPC1L1-204ENST00000546276 RNF207Q6ZRF8 634 aa13.16□□□□□ -0.3
NPC1L1-204ENST00000546276 ZNF473Q8WTR7 871 aaKnown RBP13.16□□□□□ -0.3
NPC1L1-204ENST00000546276 SUGCTQ9HAC7 445 aa13.16□□□□□ -0.3
NPC1L1-204ENST00000546276 KMT5AQ9NQR1 393 aa13.16□□□□□ -0.3
NPC1L1-204ENST00000546276 ZC3H13Q5T200 1668 aaKnown RBP13.16□□□□□ -0.3
NPC1L1-204ENST00000546276 A0A0G2JLW4 131 aa13.16□□□□□ -0.3
NPC1L1-204ENST00000546276 CHRNA3P32297 505 aa13.16□□□□□ -0.3
NPC1L1-204ENST00000546276 POLGP54098 1239 aaPredicted RBP13.16□□□□□ -0.3
NPC1L1-204ENST00000546276 GPC5P78333 572 aa13.16□□□□□ -0.3
NPC1L1-204ENST00000546276 CTTNQ14247 550 aaKnown RBP13.16□□□□□ -0.3
NPC1L1-204ENST00000546276 KNOP1Q1ED39 458 aaKnown RBP13.16□□□□□ -0.3
NPC1L1-204ENST00000546276 SYDE2Q5VT97 1194 aa13.16□□□□□ -0.3
NPC1L1-204ENST00000546276 PNMA2Q9UL42 364 aa13.16□□□□□ -0.3
NPC1L1-204ENST00000546276 SSU72P8A0A1W2PR75 194 aa13.16□□□□□ -0.3
NPC1L1-204ENST00000546276 CFAP73A6NFT4 308 aa13.16□□□□□ -0.3
NPC1L1-204ENST00000546276 IRAK1P51617 712 aa13.16□□□□□ -0.3
NPC1L1-204ENST00000546276 NXNQ6DKJ4 435 aa13.16□□□□□ -0.3
NPC1L1-204ENST00000546276 GLG1Q92896 1179 aa13.16□□□□□ -0.3
NPC1L1-204ENST00000546276 CCT8L2Q96SF2 557 aa13.16□□□□□ -0.3
NPC1L1-204ENST00000546276 TACC3Q9Y6A5 838 aa13.16□□□□□ -0.3
NPC1L1-204ENST00000546276 PLS3P13797 630 aa13.15□□□□□ -0.3
NPC1L1-204ENST00000546276 MRPS9P82933 396 aaKnown RBP13.15□□□□□ -0.3
NPC1L1-204ENST00000546276 TBC1D10BQ4KMP7 808 aaPredicted RBP13.15□□□□□ -0.3
NPC1L1-204ENST00000546276 NAALADL2Q58DX5 795 aa13.15□□□□□ -0.3
NPC1L1-204ENST00000546276 CENPUQ71F23 418 aa13.15□□□□□ -0.3
NPC1L1-204ENST00000546276 PNKPQ96T60 521 aa13.15□□□□□ -0.3
NPC1L1-204ENST00000546276 PLA2G12BQ9BX93 195 aa13.15□□□□□ -0.3
NPC1L1-204ENST00000546276 VCX3AQ9NNX9 186 aa13.15□□□□□ -0.3
NPC1L1-204ENST00000546276 TMEM260Q9NX78 707 aa13.15□□□□□ -0.3
NPC1L1-204ENST00000546276 PCDHA6Q9UN73 950 aa13.15□□□□□ -0.3
NPC1L1-204ENST00000546276 PCDHA8Q9Y5H6 950 aa13.15□□□□□ -0.3
NPC1L1-204ENST00000546276 NRXN1Q9ULB1 1477 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 136.1 ms