RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 M0QZ92 97 aa25.82■■□□□ 1.72
CHD4-214ENST00000545942 AAK1Q2M2I8 961 aa25.82■■□□□ 1.72
CHD4-214ENST00000545942 MIS18BP1Q6P0N0 1132 aa25.82■■□□□ 1.72
CHD4-214ENST00000545942 TRIM22Q8IYM9 498 aa25.82■■□□□ 1.72
CHD4-214ENST00000545942 FBXO22Q8NEZ5 403 aa25.82■■□□□ 1.72
CHD4-214ENST00000545942 RASGRP4Q8TDF6 673 aa25.82■■□□□ 1.72
CHD4-214ENST00000545942 C17orf80Q9BSJ5 609 aa25.82■■□□□ 1.72
CHD4-214ENST00000545942 PRR16Q569H4 304 aa25.81■■□□□ 1.72
CHD4-214ENST00000545942 CCDC60Q8IWA6 550 aaPredicted RBP25.81■■□□□ 1.72
CHD4-214ENST00000545942 ATP8B4Q8TF62 1192 aa25.81■■□□□ 1.72
CHD4-214ENST00000545942 ZNF274Q96GC6 653 aaPredicted RBP25.81■■□□□ 1.72
CHD4-214ENST00000545942 SAMD11Q96NU1 681 aa25.81■■□□□ 1.72
CHD4-214ENST00000545942 UPF3BQ9BZI7 483 aaKnown RBP25.81■■□□□ 1.72
CHD4-214ENST00000545942 ZNF302Q9NR11 478 aa25.81■■□□□ 1.72
CHD4-214ENST00000545942 SH3GLB2Q9NR46 395 aa25.81■■□□□ 1.72
CHD4-214ENST00000545942 COG5Q9UP83 839 aa25.81■■□□□ 1.72
CHD4-214ENST00000545942 SQORQ9Y6N5 450 aa25.81■■□□□ 1.72
CHD4-214ENST00000545942 SMIM35A0A1B0GVV1 85 aa25.8■■□□□ 1.72
CHD4-214ENST00000545942 CPLX1O14810 134 aa25.8■■□□□ 1.72
CHD4-214ENST00000545942 HBP1O60381 514 aa25.8■■□□□ 1.72
CHD4-214ENST00000545942 CIITAP33076 1130 aa25.8■■□□□ 1.72
CHD4-214ENST00000545942 TFF2Q03403 129 aa25.8■■□□□ 1.72
CHD4-214ENST00000545942 SWSAP1Q6NVH7 229 aa25.8■■□□□ 1.72
CHD4-214ENST00000545942 PDXDC2PQ6P474 469 aa25.8■■□□□ 1.72
CHD4-214ENST00000545942 MTHFD1LQ6UB35 978 aa25.8■■□□□ 1.72
CHD4-214ENST00000545942 ADAMTS19Q8TE59 1207 aa25.8■■□□□ 1.72
CHD4-214ENST00000545942 UIMC1Q96RL1 719 aa25.8■■□□□ 1.72
CHD4-214ENST00000545942 TCEAL9Q9UHQ7 104 aa25.8■■□□□ 1.72
CHD4-214ENST00000545942 TRPV2Q9Y5S1 764 aa25.8■■□□□ 1.72
CHD4-214ENST00000545942 COL4A4P53420 1690 aaPredicted RBP25.8■■□□□ 1.72
CHD4-214ENST00000545942 XIRP2A4UGR9 3374 aa25.8■■□□□ 1.72
CHD4-214ENST00000545942 NLRP5P59047 1200 aa25.79■■□□□ 1.72
CHD4-214ENST00000545942 SSRP1Q08945 709 aaKnown RBP25.79■■□□□ 1.72
CHD4-214ENST00000545942 ZNF746Q6NUN9 644 aaPredicted RBP25.79■■□□□ 1.72
CHD4-214ENST00000545942 SMAP1Q8IYB5 467 aaPredicted RBP25.79■■□□□ 1.72
CHD4-214ENST00000545942 NME8Q8N427 588 aa25.79■■□□□ 1.72
CHD4-214ENST00000545942 AGO3Q9H9G7 860 aaKnown RBP25.79■■□□□ 1.72
CHD4-214ENST00000545942 COL4A6Q14031 1691 aa25.78■■□□□ 1.72
CHD4-214ENST00000545942 ENPP3O14638 875 aa25.78■■□□□ 1.72
CHD4-214ENST00000545942 KLRC1P26715 233 aa25.78■■□□□ 1.72
CHD4-214ENST00000545942 KRT76Q01546 638 aa25.78■■□□□ 1.72
CHD4-214ENST00000545942 TMEM62Q0P6H9 643 aa25.78■■□□□ 1.72
CHD4-214ENST00000545942 EPC2Q52LR7 807 aa25.78■■□□□ 1.72
CHD4-214ENST00000545942 HLA-CQ95604 372 aa25.78■■□□□ 1.72
CHD4-214ENST00000545942 IL17RAQ96F46 866 aa25.78■■□□□ 1.72
CHD4-214ENST00000545942 REV3LO60673 3130 aa25.78■■□□□ 1.72
CHD4-214ENST00000545942 COL1A2P08123 1366 aa25.78■■□□□ 1.72
CHD4-214ENST00000545942 TNFRSF10AO00220 468 aa25.77■■□□□ 1.72
CHD4-214ENST00000545942 CD52P31358 61 aa25.77■■□□□ 1.72
CHD4-214ENST00000545942 LARP6Q9BRS8 491 aaKnown RBP25.77■■□□□ 1.72
CHD4-214ENST00000545942 CELF4Q9BZC1 486 aaKnown RBP25.77■■□□□ 1.72
CHD4-214ENST00000545942 PDRG1Q9NUG6 133 aa25.77■■□□□ 1.72
CHD4-214ENST00000545942 PPP4R2Q9NY27 417 aa25.77■■□□□ 1.72
CHD4-214ENST00000545942 SIP14410 1827 aa25.76■■□□□ 1.71
CHD4-214ENST00000545942 IGSF9BQ9UPX0 1349 aa25.76■■□□□ 1.71
CHD4-214ENST00000545942 KDM3AQ9Y4C1 1321 aa25.76■■□□□ 1.71
CHD4-214ENST00000545942 DEXIO95424 95 aa25.76■■□□□ 1.71
CHD4-214ENST00000545942 PSAPP07602 524 aa25.76■■□□□ 1.71
CHD4-214ENST00000545942 USP11P51784 963 aa25.76■■□□□ 1.71
CHD4-214ENST00000545942 ZNF484Q5JVG2 852 aa25.76■■□□□ 1.71
CHD4-214ENST00000545942 CPLX2Q6PUV4 134 aaKnown RBP25.76■■□□□ 1.71
CHD4-214ENST00000545942 TMEM192Q8IY95 271 aa25.76■■□□□ 1.71
CHD4-214ENST00000545942 CKAP2LQ8IYA6 745 aa25.76■■□□□ 1.71
CHD4-214ENST00000545942 LENG9Q96B70 501 aa25.76■■□□□ 1.71
CHD4-214ENST00000545942 UHRF1Q96T88 793 aaPredicted RBP25.76■■□□□ 1.71
CHD4-214ENST00000545942 FTHL17Q9BXU8 183 aa25.76■■□□□ 1.71
CHD4-214ENST00000545942 PCDHA10Q9Y5I2 948 aa25.76■■□□□ 1.71
CHD4-214ENST00000545942 MAFBQ9Y5Q3 323 aaPredicted RBP25.76■■□□□ 1.71
CHD4-214ENST00000545942 TTC28Q96AY4 2481 aa25.76■■□□□ 1.71
CHD4-214ENST00000545942 MUC3AQ02505 3323 aa25.76■■□□□ 1.71
CHD4-214ENST00000545942 BMP1P13497 986 aa25.75■■□□□ 1.71
CHD4-214ENST00000545942 ATP4AP20648 1035 aa25.75■■□□□ 1.71
CHD4-214ENST00000545942 KCNQ1P51787 676 aa25.75■■□□□ 1.71
CHD4-214ENST00000545942 STK3Q13188 491 aa25.75■■□□□ 1.71
CHD4-214ENST00000545942 FIBCD1Q8N539 461 aa25.75■■□□□ 1.71
CHD4-214ENST00000545942 BBXQ8WY36 941 aaPredicted RBP25.75■■□□□ 1.71
CHD4-214ENST00000545942 C22orf23Q9BZE7 217 aa25.75■■□□□ 1.71
CHD4-214ENST00000545942 PCDHA4Q9UN74 947 aa25.75■■□□□ 1.71
CHD4-214ENST00000545942 H3BNC9 293 aa25.74■■□□□ 1.71
CHD4-214ENST00000545942 PAK2Q13177 524 aa25.74■■□□□ 1.71
CHD4-214ENST00000545942 PTPROQ16827 1216 aa25.74■■□□□ 1.71
CHD4-214ENST00000545942 MRPL38Q96DV4 380 aaKnown RBP25.74■■□□□ 1.71
CHD4-214ENST00000545942 PADI3Q9ULW8 664 aa25.74■■□□□ 1.71
CHD4-214ENST00000545942 SAMM50Q9Y512 469 aa25.74■■□□□ 1.71
CHD4-214ENST00000545942 ADGRA3Q8IWK6 1321 aa25.73■■□□□ 1.71
CHD4-214ENST00000545942 ZBTB42B2RXF5 422 aa25.73■■□□□ 1.71
CHD4-214ENST00000545942 EDIL3O43854 480 aa25.73■■□□□ 1.71
CHD4-214ENST00000545942 KIAA0319LQ8IZA0 1049 aa25.73■■□□□ 1.71
CHD4-214ENST00000545942 FAM177A1Q8N128 213 aaPredicted RBP25.73■■□□□ 1.71
CHD4-214ENST00000545942 TBCKQ8TEA7 893 aa25.73■■□□□ 1.71
CHD4-214ENST00000545942 LINC01599Q8WXQ3 324 aa25.73■■□□□ 1.71
CHD4-214ENST00000545942 RC3H2Q9HBD1 1191 aaKnown RBP25.73■■□□□ 1.71
CHD4-214ENST00000545942 GABBR1Q9UBS5 961 aa25.73■■□□□ 1.71
CHD4-214ENST00000545942 WDR64B1ANS9 1081 aa25.72■■□□□ 1.71
CHD4-214ENST00000545942 GPM6BQ13491 265 aa25.72■■□□□ 1.71
CHD4-214ENST00000545942 ERICH6BQ5W0A0 696 aa25.72■■□□□ 1.71
CHD4-214ENST00000545942 RIT2Q99578 217 aa25.72■■□□□ 1.71
CHD4-214ENST00000545942 MSH4O15457 936 aa25.71■■□□□ 1.71
CHD4-214ENST00000545942 C22orf31O95567 290 aa25.71■■□□□ 1.71
CHD4-214ENST00000545942 GALNT17Q6IS24 598 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms