RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 SP7Q8TDD2 431 aaPredicted RBP22.57■■□□□ 1.2
CHD4-213ENST00000545584 RASGRP4Q8TDF6 673 aa22.57■■□□□ 1.2
CHD4-213ENST00000545584 GDPD5Q8WTR4 605 aa22.57■■□□□ 1.2
CHD4-213ENST00000545584 ZNF274Q96GC6 653 aaPredicted RBP22.57■■□□□ 1.2
CHD4-213ENST00000545584 SAMD11Q96NU1 681 aa22.57■■□□□ 1.2
CHD4-213ENST00000545584 ZNF302Q9NR11 478 aa22.57■■□□□ 1.2
CHD4-213ENST00000545584 PPP4R2Q9NY27 417 aa22.57■■□□□ 1.2
CHD4-213ENST00000545584 ADAMTS3O15072 1205 aa22.56■■□□□ 1.2
CHD4-213ENST00000545584 CIITAP33076 1130 aa22.56■■□□□ 1.2
CHD4-213ENST00000545584 PRR16Q569H4 304 aa22.56■■□□□ 1.2
CHD4-213ENST00000545584 FBXO47Q5MNV8 452 aa22.56■■□□□ 1.2
CHD4-213ENST00000545584 PDXDC2PQ6P474 469 aa22.56■■□□□ 1.2
CHD4-213ENST00000545584 TSHZ1Q6ZSZ6 1077 aa22.56■■□□□ 1.2
CHD4-213ENST00000545584 FBXO22Q8NEZ5 403 aa22.56■■□□□ 1.2
CHD4-213ENST00000545584 ATP8B4Q8TF62 1192 aa22.56■■□□□ 1.2
CHD4-213ENST00000545584 TRAPPC12Q8WVT3 735 aa22.56■■□□□ 1.2
CHD4-213ENST00000545584 UPF3BQ9BZI7 483 aaKnown RBP22.56■■□□□ 1.2
CHD4-213ENST00000545584 PDRG1Q9NUG6 133 aa22.56■■□□□ 1.2
CHD4-213ENST00000545584 TRPV2Q9Y5S1 764 aa22.56■■□□□ 1.2
CHD4-213ENST00000545584 SQORQ9Y6N5 450 aa22.56■■□□□ 1.2
CHD4-213ENST00000545584 DHX15O43143 795 aaKnown RBP22.55■■□□□ 1.2
CHD4-213ENST00000545584 KRT76Q01546 638 aa22.55■■□□□ 1.2
CHD4-213ENST00000545584 ERICH6BQ5W0A0 696 aa22.55■■□□□ 1.2
CHD4-213ENST00000545584 ZNF746Q6NUN9 644 aaPredicted RBP22.55■■□□□ 1.2
CHD4-213ENST00000545584 SWSAP1Q6NVH7 229 aa22.55■■□□□ 1.2
CHD4-213ENST00000545584 MTHFD1LQ6UB35 978 aa22.55■■□□□ 1.2
CHD4-213ENST00000545584 CCDC60Q8IWA6 550 aaPredicted RBP22.55■■□□□ 1.2
CHD4-213ENST00000545584 NME8Q8N427 588 aa22.55■■□□□ 1.2
CHD4-213ENST00000545584 ZBTB10Q96DT7 871 aa22.55■■□□□ 1.2
CHD4-213ENST00000545584 UIMC1Q96RL1 719 aa22.55■■□□□ 1.2
CHD4-213ENST00000545584 C22orf23Q9BZE7 217 aa22.55■■□□□ 1.2
CHD4-213ENST00000545584 COG5Q9UP83 839 aa22.55■■□□□ 1.2
CHD4-213ENST00000545584 SMIM35A0A1B0GVV1 85 aa22.54■■□□□ 1.2
CHD4-213ENST00000545584 DEXIO95424 95 aa22.54■■□□□ 1.2
CHD4-213ENST00000545584 CKAP2LQ8IYA6 745 aa22.54■■□□□ 1.2
CHD4-213ENST00000545584 SMAP1Q8IYB5 467 aaPredicted RBP22.54■■□□□ 1.2
CHD4-213ENST00000545584 LARP6Q9BRS8 491 aaKnown RBP22.54■■□□□ 1.2
CHD4-213ENST00000545584 C17orf80Q9BSJ5 609 aa22.54■■□□□ 1.2
CHD4-213ENST00000545584 SIP14410 1827 aa22.54■■□□□ 1.2
CHD4-213ENST00000545584 COL1A2P08123 1366 aa22.53■■□□□ 1.2
CHD4-213ENST00000545584 COL4A4P53420 1690 aaPredicted RBP22.53■■□□□ 1.2
CHD4-213ENST00000545584 PSAPP07602 524 aa22.53■■□□□ 1.2
CHD4-213ENST00000545584 KLRC1P26715 233 aa22.53■■□□□ 1.2
CHD4-213ENST00000545584 USP11P51784 963 aa22.53■■□□□ 1.2
CHD4-213ENST00000545584 TMEM62Q0P6H9 643 aa22.53■■□□□ 1.2
CHD4-213ENST00000545584 STK3Q13188 491 aa22.53■■□□□ 1.2
CHD4-213ENST00000545584 ZNF484Q5JVG2 852 aa22.53■■□□□ 1.2
CHD4-213ENST00000545584 IL17RAQ96F46 866 aa22.53■■□□□ 1.2
CHD4-213ENST00000545584 FTHL17Q9BXU8 183 aa22.53■■□□□ 1.2
CHD4-213ENST00000545584 CELF4Q9BZC1 486 aaKnown RBP22.53■■□□□ 1.2
CHD4-213ENST00000545584 SAMM50Q9Y512 469 aa22.53■■□□□ 1.2
CHD4-213ENST00000545584 PCDHA10Q9Y5I2 948 aa22.53■■□□□ 1.2
CHD4-213ENST00000545584 ENPP3O14638 875 aa22.52■■□□□ 1.2
CHD4-213ENST00000545584 CD52P31358 61 aa22.52■■□□□ 1.2
CHD4-213ENST00000545584 ADAMTS19Q8TE59 1207 aa22.52■■□□□ 1.2
CHD4-213ENST00000545584 BBXQ8WY36 941 aaPredicted RBP22.52■■□□□ 1.2
CHD4-213ENST00000545584 PCDHA4Q9UN74 947 aa22.52■■□□□ 1.2
CHD4-213ENST00000545584 TFF2Q03403 129 aa22.51■■□□□ 1.19
CHD4-213ENST00000545584 PAK2Q13177 524 aa22.51■■□□□ 1.19
CHD4-213ENST00000545584 PTPROQ16827 1216 aa22.51■■□□□ 1.19
CHD4-213ENST00000545584 EPC2Q52LR7 807 aa22.51■■□□□ 1.19
CHD4-213ENST00000545584 FAM177A1Q8N128 213 aaPredicted RBP22.51■■□□□ 1.19
CHD4-213ENST00000545584 FIBCD1Q8N539 461 aa22.51■■□□□ 1.19
CHD4-213ENST00000545584 HLA-CQ95604 372 aa22.51■■□□□ 1.19
CHD4-213ENST00000545584 AGO3Q9H9G7 860 aaKnown RBP22.51■■□□□ 1.19
CHD4-213ENST00000545584 CEP131Q9UPN4 1083 aa22.51■■□□□ 1.19
CHD4-213ENST00000545584 MAFBQ9Y5Q3 323 aaPredicted RBP22.51■■□□□ 1.19
CHD4-213ENST00000545584 WDR64B1ANS9 1081 aa22.5■■□□□ 1.19
CHD4-213ENST00000545584 TNFRSF10AO00220 468 aa22.5■■□□□ 1.19
CHD4-213ENST00000545584 CDKL5O76039 1030 aa22.5■■□□□ 1.19
CHD4-213ENST00000545584 GALNT17Q6IS24 598 aa22.5■■□□□ 1.19
CHD4-213ENST00000545584 TMEM192Q8IY95 271 aa22.5■■□□□ 1.19
CHD4-213ENST00000545584 BLIDQ8IZY5 108 aa22.5■■□□□ 1.19
CHD4-213ENST00000545584 GABBR1Q9UBS5 961 aa22.5■■□□□ 1.19
CHD4-213ENST00000545584 GINS2Q9Y248 185 aa22.5■■□□□ 1.19
CHD4-213ENST00000545584 IGSF9BQ9UPX0 1349 aa22.5■■□□□ 1.19
CHD4-213ENST00000545584 KDM3AQ9Y4C1 1321 aa22.5■■□□□ 1.19
CHD4-213ENST00000545584 TRANK1O15050 2925 aa22.5■■□□□ 1.19
CHD4-213ENST00000545584 GPM6BQ13491 265 aa22.49■■□□□ 1.19
CHD4-213ENST00000545584 TRMT1LQ7Z2T5 733 aaKnown RBP22.49■■□□□ 1.19
CHD4-213ENST00000545584 TBCKQ8TEA7 893 aa22.49■■□□□ 1.19
CHD4-213ENST00000545584 LENG9Q96B70 501 aa22.49■■□□□ 1.19
CHD4-213ENST00000545584 FAM167AQ96KS9 214 aa22.49■■□□□ 1.19
CHD4-213ENST00000545584 UHRF1Q96T88 793 aaPredicted RBP22.49■■□□□ 1.19
CHD4-213ENST00000545584 RIT2Q99578 217 aa22.49■■□□□ 1.19
CHD4-213ENST00000545584 SLKQ9H2G2 1235 aaPredicted RBP22.49■■□□□ 1.19
CHD4-213ENST00000545584 PADI3Q9ULW8 664 aa22.49■■□□□ 1.19
CHD4-213ENST00000545584 RWDD3Q9Y3V2 267 aa22.49■■□□□ 1.19
CHD4-213ENST00000545584 TTC28Q96AY4 2481 aa22.49■■□□□ 1.19
CHD4-213ENST00000545584 COL4A6Q14031 1691 aa22.49■■□□□ 1.19
CHD4-213ENST00000545584 MYH9P35579 1960 aaKnown RBP22.49■■□□□ 1.19
CHD4-213ENST00000545584 MSH4O15457 936 aa22.48■■□□□ 1.19
CHD4-213ENST00000545584 GAS7O60861 476 aa22.48■■□□□ 1.19
CHD4-213ENST00000545584 ATP4AP20648 1035 aa22.48■■□□□ 1.19
CHD4-213ENST00000545584 ODR4Q5SWX8 454 aa22.48■■□□□ 1.19
CHD4-213ENST00000545584 FAM43BQ6ZT52 329 aaPredicted RBP22.48■■□□□ 1.19
CHD4-213ENST00000545584 TEKT3Q9BXF9 490 aa22.48■■□□□ 1.19
CHD4-213ENST00000545584 DISC1Q9NRI5 854 aa22.48■■□□□ 1.19
CHD4-213ENST00000545584 VCANP13611 3396 aa22.47■■□□□ 1.19
CHD4-213ENST00000545584 H3BNC9 293 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms