RNA–Protein interactions for RNA: ENST00000545228.2

TSEN54-203, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-203ENST00000545228 KRI1Q8N9T8 703 aaKnown RBP15.53■□□□□ 0.08
TSEN54-203ENST00000545228 CDK5RAP3Q96JB5 506 aa15.53■□□□□ 0.08
TSEN54-203ENST00000545228 RNPC3Q96LT9 517 aaKnown RBP15.53■□□□□ 0.08
TSEN54-203ENST00000545228 TOX2Q96NM4 488 aa15.53■□□□□ 0.08
TSEN54-203ENST00000545228 USP28Q96RU2 1077 aa15.53■□□□□ 0.08
TSEN54-203ENST00000545228 COL25A1Q9BXS0 654 aaPredicted RBP15.53■□□□□ 0.08
TSEN54-203ENST00000545228 NT5C3AQ9H0P0 336 aa15.53■□□□□ 0.08
TSEN54-203ENST00000545228 TMEM60Q9H2L4 133 aa15.53■□□□□ 0.08
TSEN54-203ENST00000545228 TUFT1Q9NNX1 390 aa15.53■□□□□ 0.08
TSEN54-203ENST00000545228 TMEM39AQ9NV64 488 aa15.53■□□□□ 0.08
TSEN54-203ENST00000545228 PPME1Q9Y570 386 aa15.53■□□□□ 0.08
TSEN54-203ENST00000545228 COL1A2P08123 1366 aa15.52■□□□□ 0.08
TSEN54-203ENST00000545228 IGKV6D-21A0A0A0MT36 114 aa15.52■□□□□ 0.08
TSEN54-203ENST00000545228 VWA3AA6NCI4 1184 aa15.52■□□□□ 0.08
TSEN54-203ENST00000545228 RRN3P2A6NIE6 340 aa15.52■□□□□ 0.08
TSEN54-203ENST00000545228 DCDC2CA8MYV0 355 aa15.52■□□□□ 0.08
TSEN54-203ENST00000545228 SPTLC2O15270 562 aa15.52■□□□□ 0.08
TSEN54-203ENST00000545228 HBP1O60381 514 aa15.52■□□□□ 0.08
TSEN54-203ENST00000545228 CCNE2O96020 404 aa15.52■□□□□ 0.08
TSEN54-203ENST00000545228 ZNF286BP0CG31 522 aa15.52■□□□□ 0.08
TSEN54-203ENST00000545228 CEBPZQ03701 1054 aaKnown RBP15.52■□□□□ 0.08
TSEN54-203ENST00000545228 FPGSQ05932 587 aa15.52■□□□□ 0.08
TSEN54-203ENST00000545228 ITGA7Q13683 1181 aa15.52■□□□□ 0.08
TSEN54-203ENST00000545228 KIAA0753Q2KHM9 967 aa15.52■□□□□ 0.08
TSEN54-203ENST00000545228 TMEM63BQ5T3F8 832 aa15.52■□□□□ 0.08
TSEN54-203ENST00000545228 SWSAP1Q6NVH7 229 aa15.52■□□□□ 0.08
TSEN54-203ENST00000545228 OTUD6AQ7L8S5 288 aa15.52■□□□□ 0.08
TSEN54-203ENST00000545228 ANKRD33Q7Z3H0 272 aa15.52■□□□□ 0.08
TSEN54-203ENST00000545228 IGSF22Q8N9C0 903 aa15.52■□□□□ 0.08
TSEN54-203ENST00000545228 RASSF8Q8NHQ8 419 aa15.52■□□□□ 0.08
TSEN54-203ENST00000545228 BBXQ8WY36 941 aaPredicted RBP15.52■□□□□ 0.08
TSEN54-203ENST00000545228 ZSWIM4Q9H7M6 989 aa15.52■□□□□ 0.08
TSEN54-203ENST00000545228 NRBP2Q9NSY0 501 aa15.52■□□□□ 0.08
TSEN54-203ENST00000545228 GABBR1Q9UBS5 961 aa15.52■□□□□ 0.08
TSEN54-203ENST00000545228 TRPC6Q9Y210 931 aa15.52■□□□□ 0.08
TSEN54-203ENST00000545228 NRCAMQ92823 1304 aa15.51■□□□□ 0.07
TSEN54-203ENST00000545228 WNT7AO00755 349 aa15.51■□□□□ 0.07
TSEN54-203ENST00000545228 UBA7P41226 1012 aa15.51■□□□□ 0.07
TSEN54-203ENST00000545228 EPHB4P54760 987 aa15.51■□□□□ 0.07
TSEN54-203ENST00000545228 SPIRE1Q08AE8 756 aa15.51■□□□□ 0.07
TSEN54-203ENST00000545228 FAAP100Q0VG06 881 aa15.51■□□□□ 0.07
TSEN54-203ENST00000545228 FAM47CQ5HY64 1035 aa15.51■□□□□ 0.07
TSEN54-203ENST00000545228 SESTD1Q86VW0 696 aa15.51■□□□□ 0.07
TSEN54-203ENST00000545228 C4orf32Q8N8J7 132 aa15.51■□□□□ 0.07
TSEN54-203ENST00000545228 LINC00301Q8NCQ3 95 aa15.51■□□□□ 0.07
TSEN54-203ENST00000545228 MAFAQ8NHW3 353 aaPredicted RBP15.51■□□□□ 0.07
TSEN54-203ENST00000545228 CALML4Q96GE6 196 aa15.51■□□□□ 0.07
TSEN54-203ENST00000545228 SPATA32Q96LK8 384 aa15.51■□□□□ 0.07
TSEN54-203ENST00000545228 EIF2AK1Q9BQI3 630 aaKnown RBP15.51■□□□□ 0.07
TSEN54-203ENST00000545228 JPH2Q9BR39 696 aaPredicted RBP15.51■□□□□ 0.07
TSEN54-203ENST00000545228 PYM1Q9BRP8 204 aaKnown RBP15.51■□□□□ 0.07
TSEN54-203ENST00000545228 C16orf70Q9BSU1 422 aa15.51■□□□□ 0.07
TSEN54-203ENST00000545228 POLR3CQ9BUI4 534 aaPredicted RBP15.51■□□□□ 0.07
TSEN54-203ENST00000545228 TTYH1Q9H313 450 aaPredicted RBP15.51■□□□□ 0.07
TSEN54-203ENST00000545228 NOD1Q9Y239 953 aa15.51■□□□□ 0.07
TSEN54-203ENST00000545228 SRPRBQ9Y5M8 271 aaKnown RBP15.51■□□□□ 0.07
TSEN54-203ENST00000545228 MAFBQ9Y5Q3 323 aaPredicted RBP15.51■□□□□ 0.07
TSEN54-203ENST00000545228 CLIC4Q9Y696 253 aa15.51■□□□□ 0.07
TSEN54-203ENST00000545228 ARID2Q68CP9 1835 aa15.51■□□□□ 0.07
TSEN54-203ENST00000545228 POTEB3A0JP26 581 aa15.5■□□□□ 0.07
TSEN54-203ENST00000545228 POTEMA6NI47 508 aa15.5■□□□□ 0.07
TSEN54-203ENST00000545228 ARVCFO00192 962 aa15.5■□□□□ 0.07
TSEN54-203ENST00000545228 HAS3O00219 553 aa15.5■□□□□ 0.07
TSEN54-203ENST00000545228 CUTAO60888 179 aa15.5■□□□□ 0.07
TSEN54-203ENST00000545228 RPA1P27694 616 aa15.5■□□□□ 0.07
TSEN54-203ENST00000545228 ME1P48163 572 aa15.5■□□□□ 0.07
TSEN54-203ENST00000545228 DNM1Q05193 864 aaKnown RBP15.5■□□□□ 0.07
TSEN54-203ENST00000545228 PTPAQ15257 358 aa15.5■□□□□ 0.07
TSEN54-203ENST00000545228 XKR3Q5GH77 459 aa15.5■□□□□ 0.07
TSEN54-203ENST00000545228 FAM173BQ6P4H8 233 aa15.5■□□□□ 0.07
TSEN54-203ENST00000545228 POTEBQ6S5H4 581 aa15.5■□□□□ 0.07
TSEN54-203ENST00000545228 CCDC60Q8IWA6 550 aaPredicted RBP15.5■□□□□ 0.07
TSEN54-203ENST00000545228 C4orf19Q8IY42 314 aa15.5■□□□□ 0.07
TSEN54-203ENST00000545228 CCDC155Q8N6L0 562 aa15.5■□□□□ 0.07
TSEN54-203ENST00000545228 SNX29Q8TEQ0 813 aa15.5■□□□□ 0.07
TSEN54-203ENST00000545228 ATP8B4Q8TF62 1192 aa15.5■□□□□ 0.07
TSEN54-203ENST00000545228 MYLIPQ8WY64 445 aa15.5■□□□□ 0.07
TSEN54-203ENST00000545228 UIMC1Q96RL1 719 aa15.5■□□□□ 0.07
TSEN54-203ENST00000545228 LXNQ9BS40 222 aa15.5■□□□□ 0.07
TSEN54-203ENST00000545228 CCDC39Q9UFE4 941 aa15.5■□□□□ 0.07
TSEN54-203ENST00000545228 TMEM265A0A087WTH1 108 aa15.49■□□□□ 0.07
TSEN54-203ENST00000545228 GOLGA6L4A6NEF3 574 aa15.49■□□□□ 0.07
TSEN54-203ENST00000545228 OATP04181 439 aa15.49■□□□□ 0.07
TSEN54-203ENST00000545228 XRCC6P12956 609 aaKnown RBP eCLIP15.49■□□□□ 0.07
TSEN54-203ENST00000545228 CCT6AP40227 531 aaKnown RBP15.49■□□□□ 0.07
TSEN54-203ENST00000545228 CHMP4BP1P59074 171 aa15.49■□□□□ 0.07
TSEN54-203ENST00000545228 PRKCEQ02156 737 aa15.49■□□□□ 0.07
TSEN54-203ENST00000545228 PPFIA1Q13136 1202 aa15.49■□□□□ 0.07
TSEN54-203ENST00000545228 FOXD4L6Q3SYB3 417 aaPredicted RBP15.49■□□□□ 0.07
TSEN54-203ENST00000545228 ZNF484Q5JVG2 852 aa15.49■□□□□ 0.07
TSEN54-203ENST00000545228 FOXD4L3Q6VB84 417 aaPredicted RBP15.49■□□□□ 0.07
TSEN54-203ENST00000545228 ZNF579Q8NAF0 562 aaKnown RBP15.49■□□□□ 0.07
TSEN54-203ENST00000545228 GJA10Q969M2 543 aa15.49■□□□□ 0.07
TSEN54-203ENST00000545228 ZDHHC9Q9Y397 364 aa15.49■□□□□ 0.07
TSEN54-203ENST00000545228 DNAH12Q6ZR08 3092 aa15.49■□□□□ 0.07
TSEN54-203ENST00000545228 C17orf102A2RUQ5 167 aa15.48■□□□□ 0.07
TSEN54-203ENST00000545228 GAS2O43903 313 aaKnown RBP15.48■□□□□ 0.07
TSEN54-203ENST00000545228 LYPLA2O95372 231 aa15.48■□□□□ 0.07
TSEN54-203ENST00000545228 TIMP1P01033 207 aa15.48■□□□□ 0.07
TSEN54-203ENST00000545228 FOSL2P15408 326 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms