RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 PHOSPHO2Q8TCD6 241 aa17.75■□□□□ 0.43
CCDC78-216ENST00000544996 BBXQ8WY36 941 aaPredicted RBP17.75■□□□□ 0.43
CCDC78-216ENST00000544996 TIFAQ96CG3 184 aa17.75■□□□□ 0.43
CCDC78-216ENST00000544996 C8orf76Q96K31 380 aa17.75■□□□□ 0.43
CCDC78-216ENST00000544996 FAM167AQ96KS9 214 aa17.75■□□□□ 0.43
CCDC78-216ENST00000544996 FAM20AQ96MK3 541 aa17.75■□□□□ 0.43
CCDC78-216ENST00000544996 FAM161BQ96MY7 647 aa17.75■□□□□ 0.43
CCDC78-216ENST00000544996 TBC1D32Q96NH3 1257 aa17.75■□□□□ 0.43
CCDC78-216ENST00000544996 SLC9A7Q96T83 725 aa17.75■□□□□ 0.43
CCDC78-216ENST00000544996 PBX4Q9BYU1 374 aa17.75■□□□□ 0.43
CCDC78-216ENST00000544996 MTMR10Q9NXD2 777 aa17.75■□□□□ 0.43
CCDC78-216ENST00000544996 BTBD18B2RXH4 712 aa17.74■□□□□ 0.43
CCDC78-216ENST00000544996 SLC37A4O43826 429 aa17.74■□□□□ 0.43
CCDC78-216ENST00000544996 FAM26DQ5JW98 314 aa17.74■□□□□ 0.43
CCDC78-216ENST00000544996 MIER3Q7Z3K6 550 aa17.74■□□□□ 0.43
CCDC78-216ENST00000544996 TRAPPC12Q8WVT3 735 aa17.74■□□□□ 0.43
CCDC78-216ENST00000544996 DNAJB3Q8WWF6 145 aa17.74■□□□□ 0.43
CCDC78-216ENST00000544996 SEPT8Q92599 483 aa17.74■□□□□ 0.43
CCDC78-216ENST00000544996 TNFRSF25Q93038 417 aa17.74■□□□□ 0.43
CCDC78-216ENST00000544996 GJA10Q969M2 543 aa17.74■□□□□ 0.43
CCDC78-216ENST00000544996 FAM49AQ9H0Q0 323 aaPredicted RBP17.74■□□□□ 0.43
CCDC78-216ENST00000544996 SEMA6BQ9H3T3 888 aa17.74■□□□□ 0.43
CCDC78-216ENST00000544996 UNC45AQ9H3U1 944 aa17.74■□□□□ 0.43
CCDC78-216ENST00000544996 CEP131Q9UPN4 1083 aa17.74■□□□□ 0.43
CCDC78-216ENST00000544996 PCDHA2Q9Y5H9 948 aa17.74■□□□□ 0.43
CCDC78-216ENST00000544996 COL1A2P08123 1366 aa17.74■□□□□ 0.43
CCDC78-216ENST00000544996 TANC1Q9C0D5 1861 aa17.73■□□□□ 0.43
CCDC78-216ENST00000544996 M0QZ92 97 aa17.73■□□□□ 0.43
CCDC78-216ENST00000544996 TBX3O15119 743 aa17.73■□□□□ 0.43
CCDC78-216ENST00000544996 PBX2P40425 430 aa17.73■□□□□ 0.43
CCDC78-216ENST00000544996 MCM2P49736 904 aa17.73■□□□□ 0.43
CCDC78-216ENST00000544996 EARS2Q5JPH6 523 aaKnown RBP17.73■□□□□ 0.43
CCDC78-216ENST00000544996 IER5Q5VY09 327 aa17.73■□□□□ 0.43
CCDC78-216ENST00000544996 MTHFD1LQ6UB35 978 aa17.73■□□□□ 0.43
CCDC78-216ENST00000544996 TRMT1LQ7Z2T5 733 aaKnown RBP17.73■□□□□ 0.43
CCDC78-216ENST00000544996 DBF4BQ8NFT6 615 aa17.73■□□□□ 0.43
CCDC78-216ENST00000544996 KCNMB3Q9NPA1 279 aa17.73■□□□□ 0.43
CCDC78-216ENST00000544996 NRBP2Q9NSY0 501 aa17.73■□□□□ 0.43
CCDC78-216ENST00000544996 KIF3AQ9Y496 699 aa17.73■□□□□ 0.43
CCDC78-216ENST00000544996 GTF3C3Q9Y5Q9 886 aa17.73■□□□□ 0.43
CCDC78-216ENST00000544996 SZT2Q5T011 3432 aa17.72■□□□□ 0.43
CCDC78-216ENST00000544996 SMIM35A0A1B0GVV1 85 aa17.72■□□□□ 0.43
CCDC78-216ENST00000544996 KIF28PB7ZC32 967 aa17.72■□□□□ 0.43
CCDC78-216ENST00000544996 BAG4O95429 457 aaKnown RBP17.72■□□□□ 0.43
CCDC78-216ENST00000544996 CHRNA1P02708 482 aa17.72■□□□□ 0.43
CCDC78-216ENST00000544996 ATP4AP20648 1035 aa17.72■□□□□ 0.43
CCDC78-216ENST00000544996 KLRC1P26715 233 aa17.72■□□□□ 0.43
CCDC78-216ENST00000544996 GUCY1B3Q02153 619 aa17.72■□□□□ 0.43
CCDC78-216ENST00000544996 PLEKHG4Q58EX7 1191 aa17.72■□□□□ 0.43
CCDC78-216ENST00000544996 NME8Q8N427 588 aa17.72■□□□□ 0.43
CCDC78-216ENST00000544996 ZNF576Q9H609 170 aa17.72■□□□□ 0.43
CCDC78-216ENST00000544996 SLC28A3Q9HAS3 691 aa17.72■□□□□ 0.43
CCDC78-216ENST00000544996 PCDHA11Q9Y5I1 949 aa17.72■□□□□ 0.43
CCDC78-216ENST00000544996 IGSF9BQ9UPX0 1349 aa17.72■□□□□ 0.43
CCDC78-216ENST00000544996 FAM205CA6NFA0 338 aa17.71■□□□□ 0.43
CCDC78-216ENST00000544996 RABGGTBP53611 331 aa17.71■□□□□ 0.43
CCDC78-216ENST00000544996 WDR5P61964 334 aaKnown RBP17.71■□□□□ 0.43
CCDC78-216ENST00000544996 MRPS6P82932 125 aaKnown RBP17.71■□□□□ 0.43
CCDC78-216ENST00000544996 GNL2Q13823 731 aaKnown RBP17.71■□□□□ 0.43
CCDC78-216ENST00000544996 HERC6Q8IVU3 1022 aa17.71■□□□□ 0.43
CCDC78-216ENST00000544996 SLFN12Q8IYM2 578 aa17.71■□□□□ 0.43
CCDC78-216ENST00000544996 FBXO18Q8NFZ0 1043 aa17.71■□□□□ 0.43
CCDC78-216ENST00000544996 APBB2Q92870 758 aa17.71■□□□□ 0.43
CCDC78-216ENST00000544996 ZBTB10Q96DT7 871 aa17.71■□□□□ 0.43
CCDC78-216ENST00000544996 TTYH1Q9H313 450 aaPredicted RBP17.71■□□□□ 0.43
CCDC78-216ENST00000544996 OATP04181 439 aa17.7■□□□□ 0.42
CCDC78-216ENST00000544996 PRKCEQ02156 737 aa17.7■□□□□ 0.42
CCDC78-216ENST00000544996 PPP2R5CQ13362 524 aa17.7■□□□□ 0.42
CCDC78-216ENST00000544996 B3GNT9Q6UX72 402 aa17.7■□□□□ 0.42
CCDC78-216ENST00000544996 POTEDQ86YR6 584 aa17.7■□□□□ 0.42
CCDC78-216ENST00000544996 TMX3Q96JJ7 454 aa17.7■□□□□ 0.42
CCDC78-216ENST00000544996 ZBED2Q9BTP6 218 aa17.7■□□□□ 0.42
CCDC78-216ENST00000544996 BACH2Q9BYV9 841 aa17.7■□□□□ 0.42
CCDC78-216ENST00000544996 IFIH1Q9BYX4 1025 aaKnown RBP17.7■□□□□ 0.42
CCDC78-216ENST00000544996 FOXP1Q9H334 677 aaPredicted RBP17.7■□□□□ 0.42
CCDC78-216ENST00000544996 CDY2AQ9Y6F7 541 aa17.7■□□□□ 0.42
CCDC78-216ENST00000544996 SCN5AQ14524 2016 aa17.7■□□□□ 0.42
CCDC78-216ENST00000544996 TRIP12Q14669 1992 aaPredicted RBP17.7■□□□□ 0.42
CCDC78-216ENST00000544996 ZBTB42B2RXF5 422 aa17.69■□□□□ 0.42
CCDC78-216ENST00000544996 MAGEB2O15479 319 aa17.69■□□□□ 0.42
CCDC78-216ENST00000544996 AMHP03971 560 aa17.69■□□□□ 0.42
CCDC78-216ENST00000544996 GHRP10912 638 aa17.69■□□□□ 0.42
CCDC78-216ENST00000544996 MGAT3Q09327 533 aa17.69■□□□□ 0.42
CCDC78-216ENST00000544996 TMEM62Q0P6H9 643 aa17.69■□□□□ 0.42
CCDC78-216ENST00000544996 METTL13Q8N6R0 699 aa17.69■□□□□ 0.42
CCDC78-216ENST00000544996 USP38Q8NB14 1042 aa17.69■□□□□ 0.42
CCDC78-216ENST00000544996 HAS1Q92839 578 aa17.69■□□□□ 0.42
CCDC78-216ENST00000544996 GUCD1Q96NT3 240 aa17.69■□□□□ 0.42
CCDC78-216ENST00000544996 CDX2Q99626 313 aaPredicted RBP17.69■□□□□ 0.42
CCDC78-216ENST00000544996 NKX2-4Q9H2Z4 354 aa17.69■□□□□ 0.42
CCDC78-216ENST00000544996 VAV3Q9UKW4 847 aa17.69■□□□□ 0.42
CCDC78-216ENST00000544996 STXBP5LQ9Y2K9 1186 aa17.69■□□□□ 0.42
CCDC78-216ENST00000544996 YBX2Q9Y2T7 364 aaKnown RBP17.69■□□□□ 0.42
CCDC78-216ENST00000544996 TRPV2Q9Y5S1 764 aa17.69■□□□□ 0.42
CCDC78-216ENST00000544996 SQORQ9Y6N5 450 aa17.69■□□□□ 0.42
CCDC78-216ENST00000544996 TLL1O43897 1013 aa17.68■□□□□ 0.42
CCDC78-216ENST00000544996 ZNF862O60290 1169 aa17.68■□□□□ 0.42
CCDC78-216ENST00000544996 NEMFO60524 1076 aa17.68■□□□□ 0.42
CCDC78-216ENST00000544996 DKC1O60832 514 aaKnown RBP eCLIP17.68■□□□□ 0.42
CCDC78-216ENST00000544996 C22orf31O95567 290 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms