RNA–Protein interactions for RNA: ENST00000544725.5

COPS7A-220, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-220ENST00000544725 RNF216Q9NWF9 866 aaPredicted RBP16.78■□□□□ 0.28
COPS7A-220ENST00000544725 RIF1Q5UIP0 2472 aaKnown RBP16.78■□□□□ 0.28
COPS7A-220ENST00000544725 MYO15AQ9UKN7 3530 aa16.78■□□□□ 0.28
COPS7A-220ENST00000544725 IGSF9BQ9UPX0 1349 aa16.77■□□□□ 0.28
COPS7A-220ENST00000544725 BAZ2BQ9UIF8 2168 aaKnown RBP16.77■□□□□ 0.28
COPS7A-220ENST00000544725 PROB1E7EW31 1015 aa16.77■□□□□ 0.28
COPS7A-220ENST00000544725 IFIT3O14879 490 aaKnown RBP16.77■□□□□ 0.28
COPS7A-220ENST00000544725 INSRRP14616 1297 aa16.77■□□□□ 0.28
COPS7A-220ENST00000544725 SARSP49591 514 aaKnown RBP16.77■□□□□ 0.28
COPS7A-220ENST00000544725 GATMP50440 423 aa16.77■□□□□ 0.28
COPS7A-220ENST00000544725 PIBF1Q8WXW3 757 aa16.77■□□□□ 0.28
COPS7A-220ENST00000544725 RIPOR3Q96MK2 946 aa16.77■□□□□ 0.28
COPS7A-220ENST00000544725 CELF4Q9BZC1 486 aaKnown RBP16.77■□□□□ 0.28
COPS7A-220ENST00000544725 PCDHB7Q9Y5E2 793 aa16.77■□□□□ 0.28
COPS7A-220ENST00000544725 KIAA1671Q9BY89 1806 aa16.76■□□□□ 0.27
COPS7A-220ENST00000544725 MEIS2O14770 477 aa16.76■□□□□ 0.27
COPS7A-220ENST00000544725 GALR2O43603 387 aaPredicted RBP16.76■□□□□ 0.27
COPS7A-220ENST00000544725 FGF18O76093 207 aa16.76■□□□□ 0.27
COPS7A-220ENST00000544725 IBSPP21815 317 aaPredicted RBP16.76■□□□□ 0.27
COPS7A-220ENST00000544725 RBM10P98175 930 aaKnown RBP16.76■□□□□ 0.27
COPS7A-220ENST00000544725 TMEM62Q0P6H9 643 aa16.76■□□□□ 0.27
COPS7A-220ENST00000544725 TROAPQ12815 778 aa16.76■□□□□ 0.27
COPS7A-220ENST00000544725 WTAPQ15007 396 aa16.76■□□□□ 0.27
COPS7A-220ENST00000544725 TMEM184AQ6ZMB5 413 aa16.76■□□□□ 0.27
COPS7A-220ENST00000544725 CATIPQ7Z7H3 387 aa16.76■□□□□ 0.27
COPS7A-220ENST00000544725 VN1R2Q8NFZ6 395 aa16.76■□□□□ 0.27
COPS7A-220ENST00000544725 ZBTB10Q96DT7 871 aa16.76■□□□□ 0.27
COPS7A-220ENST00000544725 OSBPL3Q9H4L5 887 aa16.76■□□□□ 0.27
COPS7A-220ENST00000544725 AZI2Q9H6S1 392 aa16.76■□□□□ 0.27
COPS7A-220ENST00000544725 TRPC6Q9Y210 931 aa16.76■□□□□ 0.27
COPS7A-220ENST00000544725 PCDHA2Q9Y5H9 948 aa16.76■□□□□ 0.27
COPS7A-220ENST00000544725 KDM3AQ9Y4C1 1321 aa16.75■□□□□ 0.27
COPS7A-220ENST00000544725 TBKBP1A7MCY6 615 aa16.75■□□□□ 0.27
COPS7A-220ENST00000544725 ERVFC1P60507 584 aa16.75■□□□□ 0.27
COPS7A-220ENST00000544725 MTMR1Q13613 665 aa16.75■□□□□ 0.27
COPS7A-220ENST00000544725 SART3Q15020 963 aaKnown RBP16.75■□□□□ 0.27
COPS7A-220ENST00000544725 ANKRD54Q6NXT1 300 aa16.75■□□□□ 0.27
COPS7A-220ENST00000544725 THNSL1Q8IYQ7 743 aa16.75■□□□□ 0.27
COPS7A-220ENST00000544725 NME8Q8N427 588 aa16.75■□□□□ 0.27
COPS7A-220ENST00000544725 RRP36Q96EU6 259 aaKnown RBP16.75■□□□□ 0.27
COPS7A-220ENST00000544725 S1PR5Q9H228 398 aa16.75■□□□□ 0.27
COPS7A-220ENST00000544725 TMX1Q9H3N1 280 aa16.75■□□□□ 0.27
COPS7A-220ENST00000544725 TMEM260Q9NX78 707 aa16.75■□□□□ 0.27
COPS7A-220ENST00000544725 NR2E1Q9Y466 385 aa16.75■□□□□ 0.27
COPS7A-220ENST00000544725 VPS13AQ96RL7 3174 aa16.75■□□□□ 0.27
COPS7A-220ENST00000544725 WDR87Q6ZQQ6 2873 aa16.74■□□□□ 0.27
COPS7A-220ENST00000544725 FSCN2O14926 492 aa16.74■□□□□ 0.27
COPS7A-220ENST00000544725 MAFGO15525 162 aa16.74■□□□□ 0.27
COPS7A-220ENST00000544725 PDGFBP01127 241 aaPredicted RBP16.74■□□□□ 0.27
COPS7A-220ENST00000544725 HOXB8P17481 243 aaPredicted RBP16.74■□□□□ 0.27
COPS7A-220ENST00000544725 ITGB5P18084 799 aa16.74■□□□□ 0.27
COPS7A-220ENST00000544725 TECP42680 631 aa16.74■□□□□ 0.27
COPS7A-220ENST00000544725 KRT76Q01546 638 aa16.74■□□□□ 0.27
COPS7A-220ENST00000544725 NFX1Q12986 1120 aaKnown RBP16.74■□□□□ 0.27
COPS7A-220ENST00000544725 ASCL5Q7RTU5 278 aa16.74■□□□□ 0.27
COPS7A-220ENST00000544725 PLEKHM2Q8IWE5 1019 aa16.74■□□□□ 0.27
COPS7A-220ENST00000544725 UBALD2Q8IYN6 164 aa16.74■□□□□ 0.27
COPS7A-220ENST00000544725 RASGRP4Q8TDF6 673 aa16.74■□□□□ 0.27
COPS7A-220ENST00000544725 SENP2Q9HC62 589 aa16.74■□□□□ 0.27
COPS7A-220ENST00000544725 C1orf112Q9NSG2 853 aa16.74■□□□□ 0.27
COPS7A-220ENST00000544725 PKD2L1Q9P0L9 805 aa16.74■□□□□ 0.27
COPS7A-220ENST00000544725 SEC63Q9UGP8 760 aaKnown RBP16.74■□□□□ 0.27
COPS7A-220ENST00000544725 PUF60Q9UHX1 559 aaKnown RBP16.74■□□□□ 0.27
COPS7A-220ENST00000544725 FAM186AA6NE01 2351 aa16.73■□□□□ 0.27
COPS7A-220ENST00000544725 SMIM35A0A1B0GVV1 85 aa16.73■□□□□ 0.27
COPS7A-220ENST00000544725 DENND3A2RUS2 1198 aa16.73■□□□□ 0.27
COPS7A-220ENST00000544725 MTMR3Q13615 1198 aa16.73■□□□□ 0.27
COPS7A-220ENST00000544725 TMEM266Q2M3C6 531 aa16.73■□□□□ 0.27
COPS7A-220ENST00000544725 ODR4Q5SWX8 454 aa16.73■□□□□ 0.27
COPS7A-220ENST00000544725 SYCE2Q6PIF2 218 aa16.73■□□□□ 0.27
COPS7A-220ENST00000544725 RALYLQ86SE5 291 aaKnown RBP16.73■□□□□ 0.27
COPS7A-220ENST00000544725 COLGALT1Q8NBJ5 622 aa16.73■□□□□ 0.27
COPS7A-220ENST00000544725 KREMEN2Q8NCW0 462 aa16.73■□□□□ 0.27
COPS7A-220ENST00000544725 PCYT2Q99447 389 aa16.73■□□□□ 0.27
COPS7A-220ENST00000544725 SPZ1Q9BXG8 430 aa16.73■□□□□ 0.27
COPS7A-220ENST00000544725 JPH1Q9HDC5 661 aaPredicted RBP16.73■□□□□ 0.27
COPS7A-220ENST00000544725 JADE2Q9NQC1 790 aa16.73■□□□□ 0.27
COPS7A-220ENST00000544725 LZTS1Q9Y250 596 aa16.73■□□□□ 0.27
COPS7A-220ENST00000544725 UBIAD1Q9Y5Z9 338 aa16.73■□□□□ 0.27
COPS7A-220ENST00000544725 PLXNA4Q9HCM2 1894 aa16.73■□□□□ 0.27
COPS7A-220ENST00000544725 PRR23AA6NEV1 266 aa16.72■□□□□ 0.27
COPS7A-220ENST00000544725 LAG3P18627 525 aa16.72■□□□□ 0.27
COPS7A-220ENST00000544725 SP100P23497 879 aaPredicted RBP16.72■□□□□ 0.27
COPS7A-220ENST00000544725 NBL1P41271 181 aa16.72■□□□□ 0.27
COPS7A-220ENST00000544725 KCNC3Q14003 757 aa16.72■□□□□ 0.27
COPS7A-220ENST00000544725 PLCB4Q15147 1175 aa16.72■□□□□ 0.27
COPS7A-220ENST00000544725 PLPP4Q5VZY2 271 aa16.72■□□□□ 0.27
COPS7A-220ENST00000544725 B4GALNT3Q6L9W6 998 aa16.72■□□□□ 0.27
COPS7A-220ENST00000544725 SLC24A5Q71RS6 500 aa16.72■□□□□ 0.27
COPS7A-220ENST00000544725 CTCFLQ8NI51 663 aaPredicted RBP16.72■□□□□ 0.27
COPS7A-220ENST00000544725 TRAPPC12Q8WVT3 735 aa16.72■□□□□ 0.27
COPS7A-220ENST00000544725 MRPS27Q92552 414 aaKnown RBP16.72■□□□□ 0.27
COPS7A-220ENST00000544725 APOL5Q9BWW9 433 aa16.72■□□□□ 0.27
COPS7A-220ENST00000544725 PSTPIP2Q9H939 334 aa16.72■□□□□ 0.27
COPS7A-220ENST00000544725 ERVK-5Q9HDB9 667 aa16.72■□□□□ 0.27
COPS7A-220ENST00000544725 NGRNQ9NPE2 291 aaKnown RBP16.72■□□□□ 0.27
COPS7A-220ENST00000544725 TSHZ2Q9NRE2 1034 aa16.72■□□□□ 0.27
COPS7A-220ENST00000544725 RGS18Q9NS28 235 aa16.72■□□□□ 0.27
COPS7A-220ENST00000544725 TYW1Q9NV66 732 aaKnown RBP16.72■□□□□ 0.27
COPS7A-220ENST00000544725 SLC9A2Q9UBY0 812 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms