RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 WWC2Q6AWC2 1192 aa7.51□□□□□ -1.21
CPSF7-222ENST00000544585 C8orf86Q6ZUL3 223 aa7.51□□□□□ -1.21
CPSF7-222ENST00000544585 DDX42Q86XP3 938 aaKnown RBP eCLIP7.51□□□□□ -1.21
CPSF7-222ENST00000544585 FMNL3Q8IVF7 1028 aa7.51□□□□□ -1.21
CPSF7-222ENST00000544585 CCDC144CPQ8IYA2 1237 aa7.51□□□□□ -1.21
CPSF7-222ENST00000544585 KCT2Q8NC54 265 aa7.51□□□□□ -1.21
CPSF7-222ENST00000544585 LRRN4CLQ8ND94 238 aa7.51□□□□□ -1.21
CPSF7-222ENST00000544585 ZKSCAN4Q969J2 545 aaPredicted RBP7.51□□□□□ -1.21
CPSF7-222ENST00000544585 TEKT1Q969V4 418 aa7.51□□□□□ -1.21
CPSF7-222ENST00000544585 CCDC136Q96JN2 1154 aa7.51□□□□□ -1.21
CPSF7-222ENST00000544585 WRNIP1Q96S55 665 aa7.51□□□□□ -1.21
CPSF7-222ENST00000544585 ZNF341Q9BYN7 854 aa7.51□□□□□ -1.21
CPSF7-222ENST00000544585 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.51□□□□□ -1.218e-9■■□□□ 12.1
CPSF7-222ENST00000544585 TCEAL9Q9UHQ7 104 aa7.51□□□□□ -1.21
CPSF7-222ENST00000544585 CPA4Q9UI42 421 aa7.51□□□□□ -1.21
CPSF7-222ENST00000544585 MAPRE3Q9UPY8 281 aa7.51□□□□□ -1.21
CPSF7-222ENST00000544585 JAG2Q9Y219 1238 aa7.51□□□□□ -1.21
CPSF7-222ENST00000544585 SUGT1Q9Y2Z0 365 aa7.51□□□□□ -1.21
CPSF7-222ENST00000544585 A0A0C4DFX4 3053 aa7.51□□□□□ -1.21
CPSF7-222ENST00000544585 MYPNQ86TC9 1320 aa7.51□□□□□ -1.21
CPSF7-222ENST00000544585 SPDYE3A6NKU9 549 aa7.5□□□□□ -1.21
CPSF7-222ENST00000544585 TMPRSS2O15393 492 aa7.5□□□□□ -1.21
CPSF7-222ENST00000544585 ADAM11O75078 769 aa7.5□□□□□ -1.21
CPSF7-222ENST00000544585 FRAT2O75474 233 aaPredicted RBP7.5□□□□□ -1.21
CPSF7-222ENST00000544585 DLGAP3O95886 979 aa7.5□□□□□ -1.21
CPSF7-222ENST00000544585 CTGFP29279 349 aa7.5□□□□□ -1.21
CPSF7-222ENST00000544585 PPP2R2AP63151 447 aa7.5□□□□□ -1.21
CPSF7-222ENST00000544585 TWISTNBQ3B726 338 aaPredicted RBP7.5□□□□□ -1.21
CPSF7-222ENST00000544585 CAVIN4Q5BKX8 364 aa7.5□□□□□ -1.21
CPSF7-222ENST00000544585 HHIPL2Q6UWX4 724 aa7.5□□□□□ -1.21
CPSF7-222ENST00000544585 LMBR1LQ6UX01 489 aa7.5□□□□□ -1.21
CPSF7-222ENST00000544585 CHSY3Q70JA7 882 aa7.5□□□□□ -1.21
CPSF7-222ENST00000544585 G2E3Q7L622 706 aa7.5□□□□□ -1.21
CPSF7-222ENST00000544585 FASTKD5Q7L8L6 764 aaKnown RBP7.5□□□□□ -1.21
CPSF7-222ENST00000544585 ADAT2Q7Z6V5 191 aaKnown RBP7.5□□□□□ -1.21
CPSF7-222ENST00000544585 PPFIBP1Q86W92 1011 aa7.5□□□□□ -1.21
CPSF7-222ENST00000544585 DMRTC2Q8IXT2 367 aaPredicted RBP7.5□□□□□ -1.21
CPSF7-222ENST00000544585 UBR7Q8N806 425 aa7.5□□□□□ -1.21
CPSF7-222ENST00000544585 RNF214Q8ND24 703 aa7.5□□□□□ -1.21
CPSF7-222ENST00000544585 ZDHHC15Q96MV8 337 aa7.5□□□□□ -1.21
CPSF7-222ENST00000544585 PARK7Q99497 189 aaKnown RBP7.5□□□□□ -1.21
CPSF7-222ENST00000544585 DPH2Q9BQC3 489 aaPredicted RBP7.5□□□□□ -1.21
CPSF7-222ENST00000544585 MRPL4Q9BYD3 311 aaKnown RBP7.5□□□□□ -1.21
CPSF7-222ENST00000544585 FAM126AQ9BYI3 521 aaPredicted RBP7.5□□□□□ -1.21
CPSF7-222ENST00000544585 GBP3Q9H0R5 595 aa7.5□□□□□ -1.21
CPSF7-222ENST00000544585 ATXN3LQ9H3M9 355 aa7.5□□□□□ -1.21
CPSF7-222ENST00000544585 CRIM1Q9NZV1 1036 aa7.5□□□□□ -1.21
CPSF7-222ENST00000544585 STAP2Q9UGK3 403 aa7.5□□□□□ -1.21
CPSF7-222ENST00000544585 PPP1R9AQ9ULJ8 1098 aa7.5□□□□□ -1.21
CPSF7-222ENST00000544585 C9IYK1 514 aa7.49□□□□□ -1.21
CPSF7-222ENST00000544585 TM4SF5O14894 197 aa7.49□□□□□ -1.21
CPSF7-222ENST00000544585 UBOX5O94941 541 aa7.49□□□□□ -1.21
CPSF7-222ENST00000544585 ITGAVP06756 1048 aa7.49□□□□□ -1.21
CPSF7-222ENST00000544585 CPEP16870 476 aa7.49□□□□□ -1.21
CPSF7-222ENST00000544585 PMLP29590 882 aa7.49□□□□□ -1.21
CPSF7-222ENST00000544585 GYG1P46976 350 aa7.49□□□□□ -1.21
CPSF7-222ENST00000544585 SUMO1P63165 101 aaKnown RBP7.49□□□□□ -1.21
CPSF7-222ENST00000544585 DUOXA2Q1HG44 320 aa7.49□□□□□ -1.21
CPSF7-222ENST00000544585 BRDTQ58F21 947 aaPredicted RBP7.49□□□□□ -1.21
CPSF7-222ENST00000544585 YOD1Q5VVQ6 348 aaPredicted RBP7.49□□□□□ -1.21
CPSF7-222ENST00000544585 CNNM4Q6P4Q7 775 aa7.49□□□□□ -1.21
CPSF7-222ENST00000544585 MIGA2Q7L4E1 593 aa7.49□□□□□ -1.21
CPSF7-222ENST00000544585 NECAB2Q7Z6G3 386 aa7.49□□□□□ -1.21
CPSF7-222ENST00000544585 RNF180Q86T96 592 aa7.49□□□□□ -1.21
CPSF7-222ENST00000544585 GPR161Q8N6U8 529 aaKnown RBP7.49□□□□□ -1.21
CPSF7-222ENST00000544585 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.49□□□□□ -1.21
CPSF7-222ENST00000544585 ATL2Q8NHH9 583 aa7.49□□□□□ -1.21
CPSF7-222ENST00000544585 BAHD1Q8TBE0 780 aaPredicted RBP7.49□□□□□ -1.21
CPSF7-222ENST00000544585 FAM151AQ8WW52 585 aa7.49□□□□□ -1.21
CPSF7-222ENST00000544585 FGD4Q96M96 766 aa7.49□□□□□ -1.21
CPSF7-222ENST00000544585 CLUHP3Q96NS8 147 aa7.49□□□□□ -1.21
CPSF7-222ENST00000544585 GDF15Q99988 308 aa7.49□□□□□ -1.21
CPSF7-222ENST00000544585 PRDM6Q9NQX0 595 aa7.49□□□□□ -1.21
CPSF7-222ENST00000544585 INTS7Q9NVH2 962 aaKnown RBP7.49□□□□□ -1.21
CPSF7-222ENST00000544585 MAGEC2Q9UBF1 373 aaPredicted RBP7.49□□□□□ -1.21
CPSF7-222ENST00000544585 SUSD2Q9UGT4 822 aa7.49□□□□□ -1.21
CPSF7-222ENST00000544585 ZNF112Q9UJU3 913 aa7.49□□□□□ -1.21
CPSF7-222ENST00000544585 NOP56O00567 594 aaKnown RBP7.48□□□□□ -1.21
CPSF7-222ENST00000544585 PPM1BO75688 479 aa7.48□□□□□ -1.21
CPSF7-222ENST00000544585 BCRP11274 1271 aa7.48□□□□□ -1.21
CPSF7-222ENST00000544585 POU3F3P20264 500 aaPredicted RBP7.48□□□□□ -1.21
CPSF7-222ENST00000544585 PRKCZQ05513 592 aa7.48□□□□□ -1.21
CPSF7-222ENST00000544585 LRIT3Q3SXY7 679 aa7.48□□□□□ -1.21
CPSF7-222ENST00000544585 FOXD4L6Q3SYB3 417 aaPredicted RBP7.48□□□□□ -1.21
CPSF7-222ENST00000544585 AXDND1Q5T1B0 1012 aaPredicted RBP7.48□□□□□ -1.21
CPSF7-222ENST00000544585 APOBEC3HQ6NTF7 200 aaKnown RBP7.48□□□□□ -1.21
CPSF7-222ENST00000544585 FOXD4L3Q6VB84 417 aaPredicted RBP7.48□□□□□ -1.21
CPSF7-222ENST00000544585 NSMFQ6X4W1 530 aa7.48□□□□□ -1.21
CPSF7-222ENST00000544585 LRRTM3Q86VH5 581 aa7.48□□□□□ -1.21
CPSF7-222ENST00000544585 DEFB123Q8N688 67 aa7.48□□□□□ -1.21
CPSF7-222ENST00000544585 GALNT6Q8NCL4 622 aa7.48□□□□□ -1.21
CPSF7-222ENST00000544585 CYB5D2Q8WUJ1 264 aa7.48□□□□□ -1.21
CPSF7-222ENST00000544585 EDARADDQ8WWZ3 215 aa7.48□□□□□ -1.21
CPSF7-222ENST00000544585 COA7Q96BR5 231 aa7.48□□□□□ -1.21
CPSF7-222ENST00000544585 FANCD2OSQ96PS1 177 aa7.48□□□□□ -1.21
CPSF7-222ENST00000544585 COL25A1Q9BXS0 654 aaPredicted RBP7.48□□□□□ -1.21
CPSF7-222ENST00000544585 FBRSQ9HAH7 460 aa7.48□□□□□ -1.21
CPSF7-222ENST00000544585 C9orf78Q9NZ63 289 aaPredicted RBP7.48□□□□□ -1.21
CPSF7-222ENST00000544585 NXF1Q9UBU9 619 aaKnown RBP7.48□□□□□ -1.21
CPSF7-222ENST00000544585 AP4E1Q9UPM8 1137 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms