RNA–Protein interactions for RNA: ENST00000544301.6

VIM-209, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best)

Gene VIM, Length 2,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-209ENST00000544301 ZYXQ15942 572 aaKnown RBP19.81■□□□□ 0.76
VIM-209ENST00000544301 IQCEQ6IPM2 695 aa19.81■□□□□ 0.76
VIM-209ENST00000544301 ZNF572Q7Z3I7 529 aaPredicted RBP19.81■□□□□ 0.76
VIM-209ENST00000544301 TPH2Q8IWU9 490 aa19.81■□□□□ 0.76
VIM-209ENST00000544301 COG1Q8WTW3 980 aa19.81■□□□□ 0.76
VIM-209ENST00000544301 NOX5Q96PH1 765 aa19.81■□□□□ 0.76
VIM-209ENST00000544301 OSBPL9Q96SU4 736 aa19.81■□□□□ 0.76
VIM-209ENST00000544301 TMEM39BQ9GZU3 492 aa19.81■□□□□ 0.76
VIM-209ENST00000544301 ZNF277Q9NRM2 450 aaPredicted RBP19.81■□□□□ 0.76
VIM-209ENST00000544301 CHMP2AO43633 222 aa19.8■□□□□ 0.76
VIM-209ENST00000544301 TBC1D12O60347 775 aa19.8■□□□□ 0.76
VIM-209ENST00000544301 ACTN1P12814 892 aa19.8■□□□□ 0.76
VIM-209ENST00000544301 POLD1P28340 1107 aa19.8■□□□□ 0.76
VIM-209ENST00000544301 C2orf54Q08AI8 447 aa19.8■□□□□ 0.76
VIM-209ENST00000544301 FAM133AQ8N9E0 248 aa19.8■□□□□ 0.76
VIM-209ENST00000544301 PLCB1Q9NQ66 1216 aa19.8■□□□□ 0.76
VIM-209ENST00000544301 HYOU1Q9Y4L1 999 aa19.8■□□□□ 0.76
VIM-209ENST00000544301 MYH10P35580 1976 aa19.8■□□□□ 0.76
VIM-209ENST00000544301 SFI1A8K8P3 1242 aa19.79■□□□□ 0.76
VIM-209ENST00000544301 SLC16A3O15427 465 aaKnown RBP19.79■□□□□ 0.76
VIM-209ENST00000544301 SLC9A1P19634 815 aa19.79■□□□□ 0.76
VIM-209ENST00000544301 RPL13P26373 211 aaKnown RBP19.79■□□□□ 0.76
VIM-209ENST00000544301 PRELPP51888 382 aa19.79■□□□□ 0.76
VIM-209ENST00000544301 ARID5AQ03989 594 aa19.79■□□□□ 0.76
VIM-209ENST00000544301 KCNA1Q09470 495 aa19.79■□□□□ 0.76
VIM-209ENST00000544301 KLHL30Q0D2K2 578 aa19.79■□□□□ 0.76
VIM-209ENST00000544301 ASIC2Q16515 512 aa19.79■□□□□ 0.76
VIM-209ENST00000544301 SLC18A3Q16572 532 aa19.79■□□□□ 0.76
VIM-209ENST00000544301 CEP55Q53EZ4 464 aa19.79■□□□□ 0.76
VIM-209ENST00000544301 FKBP1CQ5VVH2 108 aa19.79■□□□□ 0.76
VIM-209ENST00000544301 NFRKBQ6P4R8 1299 aa19.79■□□□□ 0.76
VIM-209ENST00000544301 C1orf186Q6ZWK4 172 aa19.79■□□□□ 0.76
VIM-209ENST00000544301 MIGA2Q7L4E1 593 aa19.79■□□□□ 0.76
VIM-209ENST00000544301 FAM160B2Q86V87 743 aa19.79■□□□□ 0.76
VIM-209ENST00000544301 EHMT1Q9H9B1 1298 aa19.79■□□□□ 0.76
VIM-209ENST00000544301 KIF13BQ9NQT8 1826 aa19.79■□□□□ 0.76
VIM-209ENST00000544301 BUB1O43683 1085 aa19.79■□□□□ 0.76
VIM-209ENST00000544301 GAS7O60861 476 aa19.79■□□□□ 0.76
VIM-209ENST00000544301 EIF3JO75822 258 aaKnown RBP19.79■□□□□ 0.76
VIM-209ENST00000544301 XRCC5P13010 732 aaKnown RBP19.79■□□□□ 0.76
VIM-209ENST00000544301 TCP1P17987 556 aaKnown RBP19.79■□□□□ 0.76
VIM-209ENST00000544301 CAMKK2Q96RR4 588 aa19.79■□□□□ 0.76
VIM-209ENST00000544301 METTL14Q9HCE5 456 aaKnown RBP19.79■□□□□ 0.76
VIM-209ENST00000544301 LUC7LQ9NQ29 371 aaKnown RBP19.79■□□□□ 0.76
VIM-209ENST00000544301 ZBTB39O15060 712 aa19.78■□□□□ 0.76
VIM-209ENST00000544301 NCK2O43639 380 aa19.78■□□□□ 0.76
VIM-209ENST00000544301 FAM13AO94988 1023 aa19.78■□□□□ 0.76
VIM-209ENST00000544301 CAP2P40123 477 aa19.78■□□□□ 0.76
VIM-209ENST00000544301 CASP4P49662 377 aa19.78■□□□□ 0.76
VIM-209ENST00000544301 EN1Q05925 392 aaPredicted RBP19.78■□□□□ 0.76
VIM-209ENST00000544301 ITIH3Q06033 890 aa19.78■□□□□ 0.76
VIM-209ENST00000544301 GPS2Q13227 327 aa19.78■□□□□ 0.76
VIM-209ENST00000544301 KLHDC7AQ5VTJ3 777 aa19.78■□□□□ 0.76
VIM-209ENST00000544301 MMGT1Q8N4V1 131 aa19.78■□□□□ 0.76
VIM-209ENST00000544301 TLR10Q9BXR5 811 aa19.78■□□□□ 0.76
VIM-209ENST00000544301 GLIS2Q9BZE0 524 aaPredicted RBP19.78■□□□□ 0.76
VIM-209ENST00000544301 FBXO28Q9NVF7 368 aa19.78■□□□□ 0.76
VIM-209ENST00000544301 FEM1BQ9UK73 627 aa19.78■□□□□ 0.76
VIM-209ENST00000544301 A0A087X0T9 212 aa19.78■□□□□ 0.76
VIM-209ENST00000544301 CLIC2O15247 247 aa19.78■□□□□ 0.76
VIM-209ENST00000544301 EIF3DO15371 548 aaKnown RBP eCLIP19.78■□□□□ 0.76
VIM-209ENST00000544301 TGFB1I1O43294 461 aa19.78■□□□□ 0.76
VIM-209ENST00000544301 FAM228BP0C875 321 aa19.78■□□□□ 0.76
VIM-209ENST00000544301 EPB41P11171 864 aaKnown RBP19.78■□□□□ 0.76
VIM-209ENST00000544301 PON1P27169 355 aa19.78■□□□□ 0.76
VIM-209ENST00000544301 CYP2C19P33261 490 aa19.78■□□□□ 0.76
VIM-209ENST00000544301 NAB2Q15742 525 aa19.78■□□□□ 0.76
VIM-209ENST00000544301 EXOC3L4Q17RC7 722 aa19.78■□□□□ 0.76
VIM-209ENST00000544301 DCAF17Q5H9S7 520 aaPredicted RBP19.78■□□□□ 0.76
VIM-209ENST00000544301 SAMD1Q6SPF0 538 aaPredicted RBP19.78■□□□□ 0.76
VIM-209ENST00000544301 LDHDQ86WU2 507 aa19.78■□□□□ 0.76
VIM-209ENST00000544301 MYCT1Q8N699 235 aa19.78■□□□□ 0.76
VIM-209ENST00000544301 ZFP91Q96JP5 570 aaPredicted RBP19.78■□□□□ 0.76
VIM-209ENST00000544301 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.78■□□□□ 0.76
VIM-209ENST00000544301 RBBP6Q7Z6E9 1792 aaKnown RBP19.77■□□□□ 0.76
VIM-209ENST00000544301 LRRIQ3A6PVS8 624 aaPredicted RBP19.77■□□□□ 0.76
VIM-209ENST00000544301 ARP10275 920 aa19.77■□□□□ 0.76
VIM-209ENST00000544301 UCHL3P15374 230 aa19.77■□□□□ 0.76
VIM-209ENST00000544301 EPHA7Q15375 998 aa19.77■□□□□ 0.76
VIM-209ENST00000544301 IRF2BP2Q7Z5L9 587 aa19.77■□□□□ 0.76
VIM-209ENST00000544301 FAM83AQ86UY5 434 aa19.77■□□□□ 0.76
VIM-209ENST00000544301 MTMR14Q8NCE2 650 aa19.77■□□□□ 0.76
VIM-209ENST00000544301 ZNF577Q9BSK1 485 aa19.77■□□□□ 0.76
VIM-209ENST00000544301 UNC45AQ9H3U1 944 aa19.77■□□□□ 0.76
VIM-209ENST00000544301 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.77■□□□□ 0.76
VIM-209ENST00000544301 ZMYM2Q9UBW7 1377 aa19.77■□□□□ 0.76
VIM-209ENST00000544301 MUTP22033 750 aa19.76■□□□□ 0.75
VIM-209ENST00000544301 NMT1P30419 496 aaKnown RBP19.76■□□□□ 0.75
VIM-209ENST00000544301 CXCR5P32302 372 aa19.76■□□□□ 0.75
VIM-209ENST00000544301 NAP1L1P55209 391 aaKnown RBP19.76■□□□□ 0.75
VIM-209ENST00000544301 ENOX2Q16206 610 aaKnown RBP19.76■□□□□ 0.75
VIM-209ENST00000544301 MAP9Q49MG5 647 aa19.76■□□□□ 0.75
VIM-209ENST00000544301 SPATA4Q8NEY3 305 aa19.76■□□□□ 0.75
VIM-209ENST00000544301 SLC35C1Q96A29 364 aa19.76■□□□□ 0.75
VIM-209ENST00000544301 PSMB7Q99436 277 aa19.76■□□□□ 0.75
VIM-209ENST00000544301 WDR11Q9BZH6 1224 aa19.76■□□□□ 0.75
VIM-209ENST00000544301 PDGFDQ9GZP0 370 aaPredicted RBP19.76■□□□□ 0.75
VIM-209ENST00000544301 WRAP73Q9P2S5 460 aaPredicted RBP19.76■□□□□ 0.75
VIM-209ENST00000544301 ADAMTS1Q9UHI8 967 aa19.76■□□□□ 0.75
VIM-209ENST00000544301 ZMYND10O75800 440 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms