RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 MARCH6O60337 910 aa24.55■■□□□ 1.52
OTUB1-212ENST00000543988 HBP1O60381 514 aa24.55■■□□□ 1.52
OTUB1-212ENST00000543988 FGBP02675 491 aa24.55■■□□□ 1.52
OTUB1-212ENST00000543988 U2AF2P26368 475 aaKnown RBP eCLIP24.55■■□□□ 1.522e-6■□□□□ 10.6
OTUB1-212ENST00000543988 PRKCEQ02156 737 aa24.55■■□□□ 1.52
OTUB1-212ENST00000543988 RASIP1Q5U651 963 aa24.55■■□□□ 1.52
OTUB1-212ENST00000543988 TAF2Q6P1X5 1199 aa24.55■■□□□ 1.52
OTUB1-212ENST00000543988 TNPO1Q92973 898 aaKnown RBP24.55■■□□□ 1.52
OTUB1-212ENST00000543988 LRCH3Q96II8 777 aa24.55■■□□□ 1.52
OTUB1-212ENST00000543988 EML1O00423 815 aa24.54■■□□□ 1.52
OTUB1-212ENST00000543988 NBNO60934 754 aa24.54■■□□□ 1.52
OTUB1-212ENST00000543988 CAND2O75155 1236 aa24.54■■□□□ 1.52
OTUB1-212ENST00000543988 MCM7P33993 719 aa24.54■■□□□ 1.52
OTUB1-212ENST00000543988 CALCRLQ16602 461 aa24.54■■□□□ 1.52
OTUB1-212ENST00000543988 OTOP2Q7RTS6 562 aa24.54■■□□□ 1.52
OTUB1-212ENST00000543988 TRMT1LQ7Z2T5 733 aaKnown RBP24.54■■□□□ 1.52
OTUB1-212ENST00000543988 SLFN12Q8IYM2 578 aa24.54■■□□□ 1.52
OTUB1-212ENST00000543988 HERVK_113Q902F9 699 aa24.54■■□□□ 1.52
OTUB1-212ENST00000543988 CXXC1Q9P0U4 656 aaPredicted RBP24.54■■□□□ 1.52
OTUB1-212ENST00000543988 RSPH10B2B2RC85 870 aa24.53■■□□□ 1.52
OTUB1-212ENST00000543988 OATP04181 439 aa24.53■■□□□ 1.52
OTUB1-212ENST00000543988 RSPH10BP0C881 870 aa24.53■■□□□ 1.52
OTUB1-212ENST00000543988 SPIRE1Q08AE8 756 aa24.53■■□□□ 1.52
OTUB1-212ENST00000543988 BBXQ8WY36 941 aaPredicted RBP24.53■■□□□ 1.52
OTUB1-212ENST00000543988 FAM167AQ96KS9 214 aa24.53■■□□□ 1.52
OTUB1-212ENST00000543988 FTOQ9C0B1 505 aaKnown RBP eCLIP24.53■■□□□ 1.52
OTUB1-212ENST00000543988 FAM49AQ9H0Q0 323 aaPredicted RBP24.53■■□□□ 1.52
OTUB1-212ENST00000543988 TMEM60Q9H2L4 133 aa24.53■■□□□ 1.52
OTUB1-212ENST00000543988 COL1A2P08123 1366 aa24.53■■□□□ 1.52
OTUB1-212ENST00000543988 BAG4O95429 457 aaKnown RBP24.52■■□□□ 1.52
OTUB1-212ENST00000543988 PARNO95453 639 aaKnown RBP24.52■■□□□ 1.52
OTUB1-212ENST00000543988 CXCL10P02778 98 aa24.52■■□□□ 1.52
OTUB1-212ENST00000543988 ZNF484Q5JVG2 852 aa24.52■■□□□ 1.52
OTUB1-212ENST00000543988 TTC38Q5R3I4 469 aa24.52■■□□□ 1.52
OTUB1-212ENST00000543988 FAM109BQ6ICB4 259 aaPredicted RBP24.52■■□□□ 1.52
OTUB1-212ENST00000543988 RPAINQ86UA6 219 aa24.52■■□□□ 1.52
OTUB1-212ENST00000543988 MTMR9Q96QG7 549 aa24.52■■□□□ 1.52
OTUB1-212ENST00000543988 TRIP12Q14669 1992 aaPredicted RBP24.52■■□□□ 1.52
OTUB1-212ENST00000543988 H3BQV1 296 aa24.51■■□□□ 1.51
OTUB1-212ENST00000543988 K7ELQ4 463 aaPredicted RBP24.51■■□□□ 1.51
OTUB1-212ENST00000543988 TRAPPC10P48553 1259 aa24.51■■□□□ 1.51
OTUB1-212ENST00000543988 NBR1Q14596 966 aa24.51■■□□□ 1.51
OTUB1-212ENST00000543988 MCTP1Q6DN14 999 aa24.51■■□□□ 1.51
OTUB1-212ENST00000543988 NCAPH2Q6IBW4 605 aa24.51■■□□□ 1.51
OTUB1-212ENST00000543988 MTHFD1LQ6UB35 978 aa24.51■■□□□ 1.51
OTUB1-212ENST00000543988 BANK1Q8NDB2 785 aa24.51■■□□□ 1.51
OTUB1-212ENST00000543988 DNAJB3Q8WWF6 145 aa24.51■■□□□ 1.51
OTUB1-212ENST00000543988 OSBPL7Q9BZF2 842 aa24.51■■□□□ 1.51
OTUB1-212ENST00000543988 NOL7Q9UMY1 257 aaKnown RBP24.51■■□□□ 1.51
OTUB1-212ENST00000543988 PCDHA2Q9Y5H9 948 aa24.51■■□□□ 1.51
OTUB1-212ENST00000543988 SCN5AQ14524 2016 aa24.51■■□□□ 1.51
OTUB1-212ENST00000543988 C22orf31O95567 290 aa24.5■■□□□ 1.51
OTUB1-212ENST00000543988 KLRC1P26715 233 aa24.5■■□□□ 1.51
OTUB1-212ENST00000543988 ZNF174Q15697 407 aa24.5■■□□□ 1.51
OTUB1-212ENST00000543988 TCTN1Q2MV58 587 aa24.5■■□□□ 1.51
OTUB1-212ENST00000543988 FAM26DQ5JW98 314 aa24.5■■□□□ 1.51
OTUB1-212ENST00000543988 MTIF3Q9H2K0 278 aaKnown RBP24.5■■□□□ 1.51
OTUB1-212ENST00000543988 ZBBXA8MT70 800 aa24.49■■□□□ 1.51
OTUB1-212ENST00000543988 STBD1O95210 358 aa24.49■■□□□ 1.51
OTUB1-212ENST00000543988 TXKP42681 527 aa24.49■■□□□ 1.51
OTUB1-212ENST00000543988 TOB1P50616 345 aaPredicted RBP24.49■■□□□ 1.51
OTUB1-212ENST00000543988 ORC2Q13416 577 aaPredicted RBP24.49■■□□□ 1.51
OTUB1-212ENST00000543988 LARP1BQ659C4 914 aaKnown RBP24.49■■□□□ 1.51
OTUB1-212ENST00000543988 RSPH3Q86UC2 560 aa24.49■■□□□ 1.51
OTUB1-212ENST00000543988 SNX21Q969T3 373 aa24.49■■□□□ 1.51
OTUB1-212ENST00000543988 LAMA2P24043 3122 aaKnown RBP24.48■■□□□ 1.51
OTUB1-212ENST00000543988 SMIM35A0A1B0GVV1 85 aa24.48■■□□□ 1.51
OTUB1-212ENST00000543988 TMEM150BA6NC51 233 aa24.48■■□□□ 1.51
OTUB1-212ENST00000543988 CHRNA1P02708 482 aa24.48■■□□□ 1.51
OTUB1-212ENST00000543988 ACTN1P12814 892 aa24.48■■□□□ 1.51
OTUB1-212ENST00000543988 PSMC5P62195 406 aa24.48■■□□□ 1.51
OTUB1-212ENST00000543988 MRPS6P82932 125 aaKnown RBP24.48■■□□□ 1.51
OTUB1-212ENST00000543988 MGAT3Q09327 533 aa24.48■■□□□ 1.51
OTUB1-212ENST00000543988 EPHA7Q15375 998 aa24.48■■□□□ 1.51
OTUB1-212ENST00000543988 TTC12Q9H892 705 aaPredicted RBP24.48■■□□□ 1.51
OTUB1-212ENST00000543988 NRBP2Q9NSY0 501 aa24.48■■□□□ 1.51
OTUB1-212ENST00000543988 WRAP73Q9P2S5 460 aaPredicted RBP24.48■■□□□ 1.51
OTUB1-212ENST00000543988 SEPT9Q9UHD8 586 aaPredicted RBP24.48■■□□□ 1.51
OTUB1-212ENST00000543988 PCDHA12Q9UN75 941 aa24.48■■□□□ 1.51
OTUB1-212ENST00000543988 CEP131Q9UPN4 1083 aa24.48■■□□□ 1.51
OTUB1-212ENST00000543988 QARSP47897 775 aaKnown RBP24.47■■□□□ 1.51
OTUB1-212ENST00000543988 SMAD3P84022 425 aaKnown RBP24.47■■□□□ 1.51
OTUB1-212ENST00000543988 XKR3Q5GH77 459 aa24.47■■□□□ 1.51
OTUB1-212ENST00000543988 CNKSR3Q6P9H4 555 aa24.47■■□□□ 1.51
OTUB1-212ENST00000543988 INTS4Q96HW7 963 aaKnown RBP24.47■■□□□ 1.51
OTUB1-212ENST00000543988 RGL1Q9NZL6 768 aa24.47■■□□□ 1.51
OTUB1-212ENST00000543988 CDY2AQ9Y6F7 541 aa24.47■■□□□ 1.51
OTUB1-212ENST00000543988 GRXCR1A8MXD5 290 aa24.46■■□□□ 1.51
OTUB1-212ENST00000543988 RPLP2P05387 115 aaKnown RBP24.46■■□□□ 1.51
OTUB1-212ENST00000543988 P4HBP07237 508 aaKnown RBP24.46■■□□□ 1.51
OTUB1-212ENST00000543988 OR52Z1P0C646 297 aa24.46■■□□□ 1.51
OTUB1-212ENST00000543988 TMEM62Q0P6H9 643 aa24.46■■□□□ 1.51
OTUB1-212ENST00000543988 KIAA0319LQ8IZA0 1049 aa24.46■■□□□ 1.51
OTUB1-212ENST00000543988 LXNQ9BS40 222 aa24.46■■□□□ 1.51
OTUB1-212ENST00000543988 FOXD4L1Q9NU39 408 aa24.46■■□□□ 1.51
OTUB1-212ENST00000543988 SLC4A7Q9Y6M7 1214 aa24.46■■□□□ 1.51
OTUB1-212ENST00000543988 BAIAP3O94812 1187 aa24.45■■□□□ 1.5
OTUB1-212ENST00000543988 GHRP10912 638 aa24.45■■□□□ 1.5
OTUB1-212ENST00000543988 CYP4A11Q02928 519 aa24.45■■□□□ 1.5
OTUB1-212ENST00000543988 TARBP2Q15633 366 aaKnown RBP24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms