RNA–Protein interactions for RNA: ENST00000543898.5

ABCB1-210, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 5 BASIC

Gene ABCB1, Length 4,524 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-210ENST00000543898 SNX1Q13596 522 aa9.31□□□□□ -0.92
ABCB1-210ENST00000543898 RBM26Q5T8P6 1007 aaKnown RBP9.31□□□□□ -0.92
ABCB1-210ENST00000543898 LRIG3Q6UXM1 1119 aa9.31□□□□□ -0.92
ABCB1-210ENST00000543898 CAPN12Q6ZSI9 719 aa9.31□□□□□ -0.92
ABCB1-210ENST00000543898 DGKHQ86XP1 1220 aa9.31□□□□□ -0.92
ABCB1-210ENST00000543898 GLG1Q92896 1179 aa9.31□□□□□ -0.92
ABCB1-210ENST00000543898 CUL5Q93034 780 aa9.31□□□□□ -0.92
ABCB1-210ENST00000543898 STAMBPL1Q96FJ0 436 aa9.31□□□□□ -0.92
ABCB1-210ENST00000543898 GCNT4Q9P109 453 aa9.31□□□□□ -0.92
ABCB1-210ENST00000543898 DNM3Q9UQ16 869 aa9.31□□□□□ -0.92
ABCB1-210ENST00000543898 WTIPA6NIX2 430 aaPredicted RBP9.3□□□□□ -0.92
ABCB1-210ENST00000543898 H0Y3Z8 333 aa9.3□□□□□ -0.92
ABCB1-210ENST00000543898 ADAMTS3O15072 1205 aa9.3□□□□□ -0.92
ABCB1-210ENST00000543898 ZNF131P52739 623 aa9.3□□□□□ -0.92
ABCB1-210ENST00000543898 GSTO1P78417 241 aa9.3□□□□□ -0.92
ABCB1-210ENST00000543898 MXRA7P84157 204 aa9.3□□□□□ -0.92
ABCB1-210ENST00000543898 ZBTB16Q05516 673 aa9.3□□□□□ -0.92
ABCB1-210ENST00000543898 ARHGEF2Q92974 986 aaKnown RBP9.3□□□□□ -0.92
ABCB1-210ENST00000543898 SAAL1Q96ER3 474 aa9.3□□□□□ -0.92
ABCB1-210ENST00000543898 NT5C3AQ9H0P0 336 aa9.3□□□□□ -0.92
ABCB1-210ENST00000543898 ECT2Q9H8V3 914 aa9.3□□□□□ -0.92
ABCB1-210ENST00000543898 BTG4Q9NY30 223 aa9.3□□□□□ -0.92
ABCB1-210ENST00000543898 FGFR4P22455 802 aa9.3□□□□□ -0.92
ABCB1-210ENST00000543898 RPS8P62241 208 aaKnown RBP9.3□□□□□ -0.92
ABCB1-210ENST00000543898 TRIP13Q15645 432 aaPredicted RBP9.3□□□□□ -0.92
ABCB1-210ENST00000543898 DBN1Q16643 649 aa9.3□□□□□ -0.92
ABCB1-210ENST00000543898 PREPLQ4J6C6 727 aaPredicted RBP9.3□□□□□ -0.92
ABCB1-210ENST00000543898 CAPRIN2Q6IMN6 1127 aaKnown RBP9.3□□□□□ -0.92
ABCB1-210ENST00000543898 RINLQ6ZS11 566 aa9.3□□□□□ -0.92
ABCB1-210ENST00000543898 LRRC34Q8IZ02 419 aa9.3□□□□□ -0.92
ABCB1-210ENST00000543898 GLIS3Q8NEA6 775 aa9.3□□□□□ -0.92
ABCB1-210ENST00000543898 RAD54LQ92698 747 aa9.3□□□□□ -0.92
ABCB1-210ENST00000543898 MIEF2Q96C03 454 aa9.3□□□□□ -0.92
ABCB1-210ENST00000543898 CCDC87Q9NVE4 849 aa9.3□□□□□ -0.92
ABCB1-210ENST00000543898 TMOD4Q9NZQ9 345 aa9.3□□□□□ -0.92
ABCB1-210ENST00000543898 SFI1A8K8P3 1242 aa9.3□□□□□ -0.92
ABCB1-210ENST00000543898 SMIM24O75264 130 aa9.3□□□□□ -0.92
ABCB1-210ENST00000543898 PLA2G4BP0C869 781 aa9.3□□□□□ -0.92
ABCB1-210ENST00000543898 RBM5P52756 815 aaKnown RBP eCLIP9.3□□□□□ -0.92
ABCB1-210ENST00000543898 PLCB4Q15147 1175 aa9.3□□□□□ -0.92
ABCB1-210ENST00000543898 CENPPQ6IPU0 288 aa9.3□□□□□ -0.92
ABCB1-210ENST00000543898 FAM47EQ6ZV65 393 aa9.3□□□□□ -0.92
ABCB1-210ENST00000543898 MYCT1Q8N699 235 aa9.3□□□□□ -0.92
ABCB1-210ENST00000543898 LBHD1Q9BQE6 289 aaPredicted RBP9.3□□□□□ -0.92
ABCB1-210ENST00000543898 ANP32DO95626 131 aa9.3□□□□□ -0.92
ABCB1-210ENST00000543898 SLC16A2P36021 539 aa9.3□□□□□ -0.92
ABCB1-210ENST00000543898 HSPA9P38646 679 aaKnown RBP9.3□□□□□ -0.92
ABCB1-210ENST00000543898 GLYCTKQ8IVS8 523 aa9.3□□□□□ -0.92
ABCB1-210ENST00000543898 RPGRQ92834 1020 aaKnown RBP9.3□□□□□ -0.92
ABCB1-210ENST00000543898 FRMD4BQ9Y2L6 1034 aa9.3□□□□□ -0.92
ABCB1-210ENST00000543898 PIK3C2AO00443 1686 aa9.29□□□□□ -0.92
ABCB1-210ENST00000543898 TRAPPC3O43617 180 aa9.29□□□□□ -0.92
ABCB1-210ENST00000543898 EVI5O60447 810 aa9.29□□□□□ -0.92
ABCB1-210ENST00000543898 PDHA1P08559 390 aa9.29□□□□□ -0.92
ABCB1-210ENST00000543898 RGPD1P0DJD0 1748 aa9.29□□□□□ -0.92
ABCB1-210ENST00000543898 ALDH3A1P30838 453 aa9.29□□□□□ -0.92
ABCB1-210ENST00000543898 PDE6CP51160 858 aa9.29□□□□□ -0.92
ABCB1-210ENST00000543898 GNPTABQ3T906 1256 aa9.29□□□□□ -0.92
ABCB1-210ENST00000543898 PRR16Q569H4 304 aa9.29□□□□□ -0.92
ABCB1-210ENST00000543898 C6orf118Q5T5N4 469 aa9.29□□□□□ -0.92
ABCB1-210ENST00000543898 MEI1Q5TIA1 1274 aa9.29□□□□□ -0.92
ABCB1-210ENST00000543898 TRPM8Q7Z2W7 1104 aa9.29□□□□□ -0.92
ABCB1-210ENST00000543898 ARMC2Q8NEN0 867 aa9.29□□□□□ -0.92
ABCB1-210ENST00000543898 PLVAPQ9BX97 442 aa9.29□□□□□ -0.92
ABCB1-210ENST00000543898 NWD1Q149M9 1564 aa9.29□□□□□ -0.92
ABCB1-210ENST00000543898 FGFR2P21802 821 aa9.29□□□□□ -0.92
ABCB1-210ENST00000543898 ATP5DP30049 168 aa9.29□□□□□ -0.92
ABCB1-210ENST00000543898 USP11P51784 963 aa9.29□□□□□ -0.92
ABCB1-210ENST00000543898 ZNF449Q6P9G9 518 aa9.29□□□□□ -0.92
ABCB1-210ENST00000543898 CROCCP2Q86T23 111 aa9.29□□□□□ -0.92
ABCB1-210ENST00000543898 VGLL2Q8N8G2 317 aa9.29□□□□□ -0.92
ABCB1-210ENST00000543898 SHISA4Q96DD7 197 aa9.29□□□□□ -0.92
ABCB1-210ENST00000543898 EDEM3Q9BZQ6 932 aa9.29□□□□□ -0.92
ABCB1-210ENST00000543898 SIK3Q9Y2K2 1263 aa9.29□□□□□ -0.92
ABCB1-210ENST00000543898 TCP11X1B4DZS4 312 aa9.29□□□□□ -0.92
ABCB1-210ENST00000543898 C6orf229H3BNL8 230 aa9.29□□□□□ -0.92
ABCB1-210ENST00000543898 DNM1LO00429 736 aa9.29□□□□□ -0.92
ABCB1-210ENST00000543898 IL6STP40189 918 aaPredicted RBP9.29□□□□□ -0.92
ABCB1-210ENST00000543898 FUT2Q10981 343 aa9.29□□□□□ -0.92
ABCB1-210ENST00000543898 BYSLQ13895 437 aaKnown RBP9.29□□□□□ -0.92
ABCB1-210ENST00000543898 SLC29A2Q14542 456 aa9.29□□□□□ -0.92
ABCB1-210ENST00000543898 YTHDF3Q7Z739 585 aaKnown RBP9.29□□□□□ -0.92
ABCB1-210ENST00000543898 SETDB2Q96T68 719 aa9.29□□□□□ -0.92
ABCB1-210ENST00000543898 PSTPIP2Q9H939 334 aa9.29□□□□□ -0.92
ABCB1-210ENST00000543898 ANAPC4Q9UJX5 808 aa9.29□□□□□ -0.92
ABCB1-210ENST00000543898 FMN2Q9NZ56 1722 aa9.29□□□□□ -0.92
ABCB1-210ENST00000543898 STXBP3O00186 592 aa9.28□□□□□ -0.92
ABCB1-210ENST00000543898 NKRFO15226 690 aaKnown RBP eCLIP9.28□□□□□ -0.92
ABCB1-210ENST00000543898 THAP12O43422 761 aa9.28□□□□□ -0.92
ABCB1-210ENST00000543898 ORC4O43929 436 aa9.28□□□□□ -0.92
ABCB1-210ENST00000543898 EXOC3O60645 756 aa9.28□□□□□ -0.92
ABCB1-210ENST00000543898 EEF2P13639 858 aaKnown RBP9.28□□□□□ -0.92
ABCB1-210ENST00000543898 PLCG2P16885 1265 aa9.28□□□□□ -0.92
ABCB1-210ENST00000543898 KRT15P19012 456 aa9.28□□□□□ -0.92
ABCB1-210ENST00000543898 GRM4Q14833 912 aa9.28□□□□□ -0.92
ABCB1-210ENST00000543898 CRYMQ14894 314 aa9.28□□□□□ -0.92
ABCB1-210ENST00000543898 AGBL2Q5U5Z8 902 aa9.28□□□□□ -0.92
ABCB1-210ENST00000543898 PROM2Q8N271 834 aa9.28□□□□□ -0.92
ABCB1-210ENST00000543898 FGFR1OP2Q9NVK5 253 aa9.28□□□□□ -0.92
ABCB1-210ENST00000543898 BCS1LQ9Y276 419 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms