RNA–Protein interactions for RNA: ENST00000543854.5

SPPL3-208, Transcript of signal peptide peptidase like 3, humanhuman

TSL 5

Gene SPPL3, Length 508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-208ENST00000543854 LETM2Q2VYF4 491 aa21.6■■□□□ 1.05
SPPL3-208ENST00000543854 PLEKHG4Q58EX7 1191 aa21.6■■□□□ 1.05
SPPL3-208ENST00000543854 PPP2R2DQ66LE6 453 aa21.6■■□□□ 1.05
SPPL3-208ENST00000543854 NEK8Q86SG6 692 aa21.6■■□□□ 1.05
SPPL3-208ENST00000543854 TRAPPC12Q8WVT3 735 aa21.6■■□□□ 1.05
SPPL3-208ENST00000543854 DNAJB3Q8WWF6 145 aa21.6■■□□□ 1.05
SPPL3-208ENST00000543854 MYLIPQ8WY64 445 aa21.6■■□□□ 1.05
SPPL3-208ENST00000543854 SEPT8Q92599 483 aa21.6■■□□□ 1.05
SPPL3-208ENST00000543854 KIF2CQ99661 725 aa21.6■■□□□ 1.05
SPPL3-208ENST00000543854 COL1A2P08123 1366 aa21.6■■□□□ 1.05
SPPL3-208ENST00000543854 IGSF9BQ9UPX0 1349 aa21.59■■□□□ 1.05
SPPL3-208ENST00000543854 KIF28PB7ZC32 967 aa21.59■■□□□ 1.05
SPPL3-208ENST00000543854 CHMP2AO43633 222 aa21.59■■□□□ 1.05
SPPL3-208ENST00000543854 GCFC2P16383 781 aaKnown RBP21.59■■□□□ 1.05
SPPL3-208ENST00000543854 JAK3P52333 1124 aa21.59■■□□□ 1.05
SPPL3-208ENST00000543854 ST3GAL1Q11201 340 aa21.59■■□□□ 1.05
SPPL3-208ENST00000543854 GRIN2CQ14957 1233 aa21.59■■□□□ 1.05
SPPL3-208ENST00000543854 PIK3AP1Q6ZUJ8 805 aa21.59■■□□□ 1.05
SPPL3-208ENST00000543854 DBF4BQ8NFT6 615 aa21.59■■□□□ 1.05
SPPL3-208ENST00000543854 OXER1Q8TDS5 423 aa21.59■■□□□ 1.05
SPPL3-208ENST00000543854 ZBTB10Q96DT7 871 aa21.59■■□□□ 1.05
SPPL3-208ENST00000543854 MBOAT7Q96N66 472 aa21.59■■□□□ 1.05
SPPL3-208ENST00000543854 FAM49AQ9H0Q0 323 aaPredicted RBP21.59■■□□□ 1.05
SPPL3-208ENST00000543854 GABBR1Q9UBS5 961 aa21.59■■□□□ 1.05
SPPL3-208ENST00000543854 MAFBQ9Y5Q3 323 aaPredicted RBP21.59■■□□□ 1.05
SPPL3-208ENST00000543854 EYSQ5T1H1 3165 aa21.59■■□□□ 1.05
SPPL3-208ENST00000543854 MYOGP15173 224 aa21.58■■□□□ 1.05
SPPL3-208ENST00000543854 FOSL2P15408 326 aa21.58■■□□□ 1.05
SPPL3-208ENST00000543854 SFNP31947 248 aa21.58■■□□□ 1.05
SPPL3-208ENST00000543854 DEFB103AP81534 67 aa21.58■■□□□ 1.05
SPPL3-208ENST00000543854 MRPS6P82932 125 aaKnown RBP21.58■■□□□ 1.05
SPPL3-208ENST00000543854 CCDC83Q8IWF9 413 aa21.58■■□□□ 1.05
SPPL3-208ENST00000543854 NAP1L4Q99733 375 aaKnown RBP21.58■■□□□ 1.05
SPPL3-208ENST00000543854 UNC45AQ9H3U1 944 aa21.58■■□□□ 1.05
SPPL3-208ENST00000543854 DISC1Q9NRI5 854 aa21.58■■□□□ 1.05
SPPL3-208ENST00000543854 PCDHA2Q9Y5H9 948 aa21.58■■□□□ 1.05
SPPL3-208ENST00000543854 CHD7Q9P2D1 2997 aa21.57■■□□□ 1.04
SPPL3-208ENST00000543854 WDR81Q562E7 1941 aa21.57■■□□□ 1.04
SPPL3-208ENST00000543854 M0QZ92 97 aa21.57■■□□□ 1.04
SPPL3-208ENST00000543854 TLL1O43897 1013 aa21.57■■□□□ 1.04
SPPL3-208ENST00000543854 CHRNA1P02708 482 aa21.57■■□□□ 1.04
SPPL3-208ENST00000543854 CA3P07451 260 aa21.57■■□□□ 1.04
SPPL3-208ENST00000543854 FOSBP53539 338 aa21.57■■□□□ 1.04
SPPL3-208ENST00000543854 MGAT3Q09327 533 aa21.57■■□□□ 1.04
SPPL3-208ENST00000543854 ZNF484Q5JVG2 852 aa21.57■■□□□ 1.04
SPPL3-208ENST00000543854 MTHFD1LQ6UB35 978 aa21.57■■□□□ 1.04
SPPL3-208ENST00000543854 ETNPPLQ8TBG4 499 aa21.57■■□□□ 1.04
SPPL3-208ENST00000543854 BBXQ8WY36 941 aaPredicted RBP21.57■■□□□ 1.04
SPPL3-208ENST00000543854 APBB2Q92870 758 aa21.57■■□□□ 1.04
SPPL3-208ENST00000543854 GJA10Q969M2 543 aa21.57■■□□□ 1.04
SPPL3-208ENST00000543854 FAM167AQ96KS9 214 aa21.57■■□□□ 1.04
SPPL3-208ENST00000543854 ZSCAN31Q96LW9 406 aaPredicted RBP21.57■■□□□ 1.04
SPPL3-208ENST00000543854 IFIH1Q9BYX4 1025 aaKnown RBP21.57■■□□□ 1.04
SPPL3-208ENST00000543854 SH2B1Q9NRF2 756 aaPredicted RBP21.57■■□□□ 1.04
SPPL3-208ENST00000543854 CDY2AQ9Y6F7 541 aa21.57■■□□□ 1.04
SPPL3-208ENST00000543854 SMIM35A0A1B0GVV1 85 aa21.56■■□□□ 1.04
SPPL3-208ENST00000543854 SLC37A4O43826 429 aa21.56■■□□□ 1.04
SPPL3-208ENST00000543854 PSMD10O75832 226 aa21.56■■□□□ 1.04
SPPL3-208ENST00000543854 MMP1P03956 469 aa21.56■■□□□ 1.04
SPPL3-208ENST00000543854 AMHP03971 560 aa21.56■■□□□ 1.04
SPPL3-208ENST00000543854 GHRP10912 638 aa21.56■■□□□ 1.04
SPPL3-208ENST00000543854 NR5A1Q13285 461 aa21.56■■□□□ 1.04
SPPL3-208ENST00000543854 RABEP1Q15276 862 aa21.56■■□□□ 1.04
SPPL3-208ENST00000543854 IER5Q5VY09 327 aa21.56■■□□□ 1.04
SPPL3-208ENST00000543854 PPP4R3AQ6IN85 833 aa21.56■■□□□ 1.04
SPPL3-208ENST00000543854 RDM1Q8NG50 284 aa21.56■■□□□ 1.04
SPPL3-208ENST00000543854 LLPHQ9BRT6 129 aaKnown RBP21.56■■□□□ 1.04
SPPL3-208ENST00000543854 ZBED2Q9BTP6 218 aa21.56■■□□□ 1.04
SPPL3-208ENST00000543854 CEP131Q9UPN4 1083 aa21.56■■□□□ 1.04
SPPL3-208ENST00000543854 CCNT1O60563 726 aaKnown RBP21.55■■□□□ 1.04
SPPL3-208ENST00000543854 ATP4AP20648 1035 aa21.55■■□□□ 1.04
SPPL3-208ENST00000543854 KLRC1P26715 233 aa21.55■■□□□ 1.04
SPPL3-208ENST00000543854 MKRN4PQ13434 485 aaPredicted RBP21.55■■□□□ 1.04
SPPL3-208ENST00000543854 TRMT1LQ7Z2T5 733 aaKnown RBP21.55■■□□□ 1.04
SPPL3-208ENST00000543854 MIER3Q7Z3K6 550 aa21.55■■□□□ 1.04
SPPL3-208ENST00000543854 OSBPL7Q9BZF2 842 aa21.55■■□□□ 1.04
SPPL3-208ENST00000543854 TRPV2Q9Y5S1 764 aa21.55■■□□□ 1.04
SPPL3-208ENST00000543854 ZBTB42B2RXF5 422 aa21.54■■□□□ 1.04
SPPL3-208ENST00000543854 GJB5O95377 273 aa21.54■■□□□ 1.04
SPPL3-208ENST00000543854 PRKCEQ02156 737 aa21.54■■□□□ 1.04
SPPL3-208ENST00000543854 LPIN1Q14693 890 aa21.54■■□□□ 1.04
SPPL3-208ENST00000543854 KRT40Q6A162 431 aa21.54■■□□□ 1.04
SPPL3-208ENST00000543854 TSHZ1Q6ZSZ6 1077 aa21.54■■□□□ 1.04
SPPL3-208ENST00000543854 TMCO2Q7Z6W1 182 aaPredicted RBP21.54■■□□□ 1.04
SPPL3-208ENST00000543854 DIS3L2Q8IYB7 885 aaKnown RBP21.54■■□□□ 1.04
SPPL3-208ENST00000543854 MYOCDQ8IZQ8 938 aa21.54■■□□□ 1.04
SPPL3-208ENST00000543854 TNFRSF25Q93038 417 aa21.54■■□□□ 1.04
SPPL3-208ENST00000543854 GAS2L1Q99501 681 aaPredicted RBP21.54■■□□□ 1.04
SPPL3-208ENST00000543854 PRDM12Q9H4Q4 367 aa21.54■■□□□ 1.04
SPPL3-208ENST00000543854 KCNMB3Q9NPA1 279 aa21.54■■□□□ 1.04
SPPL3-208ENST00000543854 RBAK-RBAKDNI3L0D1 243 aa21.53■■□□□ 1.04
SPPL3-208ENST00000543854 ST18O60284 1047 aa21.53■■□□□ 1.04
SPPL3-208ENST00000543854 OATP04181 439 aa21.53■■□□□ 1.04
SPPL3-208ENST00000543854 HMGN5P82970 282 aaKnown RBP21.53■■□□□ 1.04
SPPL3-208ENST00000543854 TMEM62Q0P6H9 643 aa21.53■■□□□ 1.04
SPPL3-208ENST00000543854 UGCGQ16739 394 aa21.53■■□□□ 1.04
SPPL3-208ENST00000543854 EARS2Q5JPH6 523 aaKnown RBP21.53■■□□□ 1.04
SPPL3-208ENST00000543854 FBXO47Q5MNV8 452 aa21.53■■□□□ 1.04
SPPL3-208ENST00000543854 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.53■■□□□ 1.04
SPPL3-208ENST00000543854 NME8Q8N427 588 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms