RNA–Protein interactions for RNA: ENST00000543721.1

LMO3-229, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 3,626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-229ENST00000543721 SESTD1Q86VW0 696 aa5.43□□□□□ -1.54
LMO3-229ENST00000543721 ARHGAP18Q8N392 663 aa5.43□□□□□ -1.54
LMO3-229ENST00000543721 ENAHQ8N8S7 591 aaPredicted RBP5.43□□□□□ -1.54
LMO3-229ENST00000543721 DRAXINQ8NBI3 349 aaPredicted RBP5.43□□□□□ -1.54
LMO3-229ENST00000543721 NKX2-3Q8TAU0 364 aa5.43□□□□□ -1.54
LMO3-229ENST00000543721 FBXO41Q8TF61 875 aa5.43□□□□□ -1.54
LMO3-229ENST00000543721 TBC1D5Q92609 795 aa5.43□□□□□ -1.54
LMO3-229ENST00000543721 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.43□□□□□ -1.54
LMO3-229ENST00000543721 RAB34Q9BZG1 259 aa5.43□□□□□ -1.54
LMO3-229ENST00000543721 ZBTB3Q9H5J0 574 aa5.43□□□□□ -1.54
LMO3-229ENST00000543721 PRDM16Q9HAZ2 1276 aa5.43□□□□□ -1.54
LMO3-229ENST00000543721 POLD4Q9HCU8 107 aa5.43□□□□□ -1.54
LMO3-229ENST00000543721 RGL1Q9NZL6 768 aa5.43□□□□□ -1.54
LMO3-229ENST00000543721 PNMA2Q9UL42 364 aa5.43□□□□□ -1.54
LMO3-229ENST00000543721 NOC2LQ9Y3T9 749 aaKnown RBP5.43□□□□□ -1.54
LMO3-229ENST00000543721 L3MBTL1Q9Y468 752 aa5.43□□□□□ -1.54
LMO3-229ENST00000543721 PODXLO00592 558 aa5.43□□□□□ -1.54
LMO3-229ENST00000543721 DAPK3O43293 454 aa5.43□□□□□ -1.54
LMO3-229ENST00000543721 EVI5O60447 810 aa5.43□□□□□ -1.54
LMO3-229ENST00000543721 HNRNPCL1O60812 293 aaKnown RBP5.43□□□□□ -1.54
LMO3-229ENST00000543721 SKAP2O75563 359 aaPredicted RBP5.43□□□□□ -1.54
LMO3-229ENST00000543721 UBOX5O94941 541 aa5.43□□□□□ -1.54
LMO3-229ENST00000543721 RARAP10276 462 aa5.43□□□□□ -1.54
LMO3-229ENST00000543721 PLCG1P19174 1290 aa5.43□□□□□ -1.54
LMO3-229ENST00000543721 CTCFP49711 727 aaPredicted RBP5.43□□□□□ -1.54
LMO3-229ENST00000543721 STK4Q13043 487 aa5.43□□□□□ -1.54
LMO3-229ENST00000543721 MTHFD1LQ6UB35 978 aa5.43□□□□□ -1.54
LMO3-229ENST00000543721 PARD3BQ8TEW8 1205 aa5.43□□□□□ -1.54
LMO3-229ENST00000543721 TRAPPC9Q96Q05 1148 aa5.43□□□□□ -1.54
LMO3-229ENST00000543721 TXLNGYQ9BZA5 131 aa5.43□□□□□ -1.54
LMO3-229ENST00000543721 NLRP2Q9NX02 1062 aa5.43□□□□□ -1.54
LMO3-229ENST00000543721 KLHL14Q9P2G3 628 aa5.43□□□□□ -1.54
LMO3-229ENST00000543721 DAAM1Q9Y4D1 1078 aa5.43□□□□□ -1.54
LMO3-229ENST00000543721 COL4A3BPQ9Y5P4 624 aa5.43□□□□□ -1.54
LMO3-229ENST00000543721 RREB1Q92766 1687 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 PDLIM1O00151 329 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 WNT7AO00755 349 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 PLEKHA8P1O95397 391 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 FGRP09769 529 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 OR52Z1P0C646 297 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 KCNA6P17658 529 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 ATP6V1C1P21283 382 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 ITGA6P23229 1130 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 ALDH3A1P30838 453 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 EPS15P42566 896 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 PHKA1P46020 1223 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 INHBEP58166 350 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 KLC1Q07866 573 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 CUL3Q13618 768 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 SETDB1Q15047 1291 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 RNF43Q68DV7 783 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 KRT25Q7Z3Z0 450 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 KIRREL3Q8IZU9 778 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 VGLL2Q8N8G2 317 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 BRIP1Q9BX63 1249 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 SEMA6BQ9H3T3 888 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 AMFRQ9UKV5 643 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 ATP8A1Q9Y2Q0 1164 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 TTC36A6NLP5 189 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 MINDY4BA8MYZ0 360 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 ERVV-2B6SEH9 535 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 CAND2O75155 1236 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 GJB6O95452 261 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 OAS1P00973 400 aaKnown RBP5.42□□□□□ -1.54
LMO3-229ENST00000543721 H2AFZP0C0S5 128 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 LINGO3P0C6S8 592 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 ACADSP16219 412 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 CALB2P22676 271 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 MARSP56192 900 aaKnown RBP5.42□□□□□ -1.54
LMO3-229ENST00000543721 FAM69CQ0P6D2 419 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 RAPGEF1Q13905 1077 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 DIXDC1Q155Q3 683 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 WASHC2DQ5SRD0 308 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 MFSD5Q6N075 450 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 H2AFVQ71UI9 128 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 SLFN11Q7Z7L1 901 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 TEKT4Q8WW24 435 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 SHISA4Q96DD7 197 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 CDK5RAP3Q96JB5 506 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 TMEM237Q96Q45 408 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 LZTS2Q9BRK4 669 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 ERP44Q9BS26 406 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 CCDC28BQ9BUN5 200 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 LSM14BQ9BX40 385 aaKnown RBP5.42□□□□□ -1.54
LMO3-229ENST00000543721 TRIM4Q9C037 500 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 TSPYL2Q9H2G4 693 aaPredicted RBP5.42□□□□□ -1.54
LMO3-229ENST00000543721 RNPEPL1Q9HAU8 725 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 BMP2KQ9NSY1 1161 aaPredicted RBP5.42□□□□□ -1.54
LMO3-229ENST00000543721 USP40Q9NVE5 1235 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 STK24Q9Y6E0 443 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 PCDH11XQ9BZA7 1347 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 MAGEB6P1A0A0J9YX57 407 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 EME2A4GXA9 379 aaPredicted RBP5.42□□□□□ -1.54
LMO3-229ENST00000543721 GGPS1O95749 300 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 GNAT1P11488 350 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 DNA2P51530 1060 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 PTENP60484 403 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 POLR2FP61218 127 aaKnown RBP5.42□□□□□ -1.54
LMO3-229ENST00000543721 ACVR2BQ13705 512 aa5.42□□□□□ -1.54
LMO3-229ENST00000543721 TMEM266Q2M3C6 531 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms