RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 WDR91A4D1P6 747 aa20.89■□□□□ 0.94
SUDS3-204ENST00000543473 DCTN3O75935 186 aa20.89■□□□□ 0.94
SUDS3-204ENST00000543473 GYPCP04921 128 aa20.89■□□□□ 0.94
SUDS3-204ENST00000543473 TBC1D9BQ66K14 1250 aa20.89■□□□□ 0.94
SUDS3-204ENST00000543473 MROH7-TTC4A0A0A0MT08 1334 aa20.89■□□□□ 0.94
SUDS3-204ENST00000543473 MSH2P43246 934 aa20.89■□□□□ 0.93
SUDS3-204ENST00000543473 BPIFB4P59827 614 aa20.89■□□□□ 0.93
SUDS3-204ENST00000543473 GPATCH4Q5T3I0 446 aaKnown RBP20.89■□□□□ 0.93
SUDS3-204ENST00000543473 CAPRIN2Q6IMN6 1127 aaKnown RBP20.89■□□□□ 0.93
SUDS3-204ENST00000543473 PVALEFA0A1B0GWK0 134 aa20.89■□□□□ 0.93
SUDS3-204ENST00000543473 KRT19P08727 400 aa20.89■□□□□ 0.93
SUDS3-204ENST00000543473 ELF1P32519 619 aa20.89■□□□□ 0.93
SUDS3-204ENST00000543473 LSP1P33241 339 aa20.89■□□□□ 0.93
SUDS3-204ENST00000543473 ATP2C1P98194 919 aaPredicted RBP20.89■□□□□ 0.93
SUDS3-204ENST00000543473 ENAHQ8N8S7 591 aaPredicted RBP20.89■□□□□ 0.93
SUDS3-204ENST00000543473 KCNV2Q8TDN2 545 aa20.89■□□□□ 0.93
SUDS3-204ENST00000543473 ARHGEF1Q92888 912 aaKnown RBP20.89■□□□□ 0.93
SUDS3-204ENST00000543473 SPATA31D1Q6ZQQ2 1576 aa20.89■□□□□ 0.93
SUDS3-204ENST00000543473 PSMD14O00487 310 aa20.89■□□□□ 0.93
SUDS3-204ENST00000543473 KRT14P02533 472 aa20.89■□□□□ 0.93
SUDS3-204ENST00000543473 ICA1Q05084 483 aa20.89■□□□□ 0.93
SUDS3-204ENST00000543473 DGKHQ86XP1 1220 aa20.89■□□□□ 0.93
SUDS3-204ENST00000543473 L1RE1Q9UN81 338 aa20.89■□□□□ 0.93
SUDS3-204ENST00000543473 TACC3Q9Y6A5 838 aa20.89■□□□□ 0.93
SUDS3-204ENST00000543473 FRMPD1Q5SYB0 1578 aa20.89■□□□□ 0.93
SUDS3-204ENST00000543473 hCG_1984214I3L0E3 225 aa20.88■□□□□ 0.93
SUDS3-204ENST00000543473 USP17L8P0C7I0 530 aa20.88■□□□□ 0.93
SUDS3-204ENST00000543473 ARHGAP4P98171 946 aa20.88■□□□□ 0.93
SUDS3-204ENST00000543473 ZNF713Q8N859 430 aaPredicted RBP20.88■□□□□ 0.93
SUDS3-204ENST00000543473 MLXIPLQ9NP71 852 aa20.88■□□□□ 0.93
SUDS3-204ENST00000543473 INTUQ9ULD6 942 aa20.88■□□□□ 0.93
SUDS3-204ENST00000543473 CDHR2Q9BYE9 1310 aa20.88■□□□□ 0.93
SUDS3-204ENST00000543473 PP2D1A8MPX8 630 aa20.88■□□□□ 0.93
SUDS3-204ENST00000543473 ATP5HO75947 161 aa20.88■□□□□ 0.93
SUDS3-204ENST00000543473 ALX1Q15699 326 aa20.88■□□□□ 0.93
SUDS3-204ENST00000543473 SUFUQ9UMX1 484 aa20.88■□□□□ 0.93
SUDS3-204ENST00000543473 PRPF6O94906 941 aaKnown RBP20.88■□□□□ 0.93
SUDS3-204ENST00000543473 HNRNPH1P31943 449 aaKnown RBP20.88■□□□□ 0.93
SUDS3-204ENST00000543473 SNX16P57768 344 aa20.88■□□□□ 0.93
SUDS3-204ENST00000543473 HAUS2Q9NVX0 235 aa20.88■□□□□ 0.93
SUDS3-204ENST00000543473 MIF4GDA9UHW6 222 aaKnown RBP20.88■□□□□ 0.93
SUDS3-204ENST00000543473 MT-ND3P03897 115 aa20.88■□□□□ 0.93
SUDS3-204ENST00000543473 RWDD2BP57060 319 aa20.88■□□□□ 0.93
SUDS3-204ENST00000543473 XKR9Q5GH70 373 aa20.88■□□□□ 0.93
SUDS3-204ENST00000543473 TTBK2Q6IQ55 1244 aa20.88■□□□□ 0.93
SUDS3-204ENST00000543473 LRRC31Q6UY01 552 aa20.88■□□□□ 0.93
SUDS3-204ENST00000543473 TRIM42Q8IWZ5 723 aa20.88■□□□□ 0.93
SUDS3-204ENST00000543473 ETNK1Q9HBU6 452 aa20.88■□□□□ 0.93
SUDS3-204ENST00000543473 IQGAP1P46940 1657 aa20.88■□□□□ 0.93
SUDS3-204ENST00000543473 SYNGAP1Q96PV0 1343 aa20.87■□□□□ 0.93
SUDS3-204ENST00000543473 STAM2O75886 525 aa20.87■□□□□ 0.93
SUDS3-204ENST00000543473 USP49Q70CQ1 688 aa20.87■□□□□ 0.93
SUDS3-204ENST00000543473 CCT6BQ92526 530 aa20.87■□□□□ 0.93
SUDS3-204ENST00000543473 CELF1Q92879 486 aaKnown RBP20.87■□□□□ 0.93
SUDS3-204ENST00000543473 TRIM11Q96F44 468 aa20.87■□□□□ 0.93
SUDS3-204ENST00000543473 DYNLL2Q96FJ2 89 aa20.87■□□□□ 0.93
SUDS3-204ENST00000543473 KCNG1Q9UIX4 513 aa20.87■□□□□ 0.93
SUDS3-204ENST00000543473 ZBED4O75132 1171 aa20.87■□□□□ 0.93
SUDS3-204ENST00000543473 CRCPO75575 148 aa20.87■□□□□ 0.93
SUDS3-204ENST00000543473 PDHA1P08559 390 aa20.87■□□□□ 0.93
SUDS3-204ENST00000543473 TXNRD1Q16881 649 aa20.87■□□□□ 0.93
SUDS3-204ENST00000543473 SLFN13Q68D06 897 aa20.87■□□□□ 0.93
SUDS3-204ENST00000543473 CHURC1Q8WUH1 139 aa20.87■□□□□ 0.93
SUDS3-204ENST00000543473 STOML1Q9UBI4 398 aa20.87■□□□□ 0.93
SUDS3-204ENST00000543473 ANGPTL2Q9UKU9 493 aa20.87■□□□□ 0.93
SUDS3-204ENST00000543473 MAD1L1Q9Y6D9 718 aa20.87■□□□□ 0.93
SUDS3-204ENST00000543473 JCADQ9P266 1359 aa20.87■□□□□ 0.93
SUDS3-204ENST00000543473 USP17L3A6NCW0 530 aa20.87■□□□□ 0.93
SUDS3-204ENST00000543473 USP17L4A6NCW7 530 aa20.87■□□□□ 0.93
SUDS3-204ENST00000543473 MECOMQ03112 1051 aa20.87■□□□□ 0.93
SUDS3-204ENST00000543473 SPARCL1Q14515 664 aa20.87■□□□□ 0.93
SUDS3-204ENST00000543473 DBN1Q16643 649 aa20.87■□□□□ 0.93
SUDS3-204ENST00000543473 USP17L1Q7RTZ2 530 aa20.87■□□□□ 0.93
SUDS3-204ENST00000543473 ZC3H18Q86VM9 953 aaKnown RBP20.87■□□□□ 0.93
SUDS3-204ENST00000543473 STAG2Q8N3U4 1231 aa20.87■□□□□ 0.93
SUDS3-204ENST00000543473 SLITRK6Q9H5Y7 841 aa20.87■□□□□ 0.93
SUDS3-204ENST00000543473 MINPP1Q9UNW1 487 aa20.87■□□□□ 0.93
SUDS3-204ENST00000543473 CEP170BQ9Y4F5 1589 aaPredicted RBP20.87■□□□□ 0.93
SUDS3-204ENST00000543473 CLRN2A0PK11 232 aa20.87■□□□□ 0.93
SUDS3-204ENST00000543473 KCNH2Q12809 1159 aa20.87■□□□□ 0.93
SUDS3-204ENST00000543473 TRIM28Q13263 835 aaKnown RBP20.87■□□□□ 0.93
SUDS3-204ENST00000543473 TEKT3Q9BXF9 490 aa20.87■□□□□ 0.93
SUDS3-204ENST00000543473 AMNQ9BXJ7 453 aa20.87■□□□□ 0.93
SUDS3-204ENST00000543473 AGPAT5Q9NUQ2 364 aa20.87■□□□□ 0.93
SUDS3-204ENST00000543473 LMNAP02545 664 aaKnown RBP20.86■□□□□ 0.93
SUDS3-204ENST00000543473 NXNQ6DKJ4 435 aa20.86■□□□□ 0.93
SUDS3-204ENST00000543473 SRRM1Q8IYB3 904 aaKnown RBP20.86■□□□□ 0.93
SUDS3-204ENST00000543473 LIG4P49917 911 aa20.86■□□□□ 0.93
SUDS3-204ENST00000543473 SLC8A3P57103 927 aa20.86■□□□□ 0.93
SUDS3-204ENST00000543473 GNPTABQ3T906 1256 aa20.86■□□□□ 0.93
SUDS3-204ENST00000543473 AMACRQ9UHK6 382 aa20.86■□□□□ 0.93
SUDS3-204ENST00000543473 NOC2LQ9Y3T9 749 aaKnown RBP20.86■□□□□ 0.93
SUDS3-204ENST00000543473 POLR2MP0CAP2 368 aa20.86■□□□□ 0.93
SUDS3-204ENST00000543473 DPYDQ12882 1025 aa20.86■□□□□ 0.93
SUDS3-204ENST00000543473 SEMA3FQ13275 785 aa20.86■□□□□ 0.93
SUDS3-204ENST00000543473 KCNB1Q14721 858 aa20.86■□□□□ 0.93
SUDS3-204ENST00000543473 BRIP1Q9BX63 1249 aa20.86■□□□□ 0.93
SUDS3-204ENST00000543473 RASA4BC9J798 803 aa20.86■□□□□ 0.93
SUDS3-204ENST00000543473 RASA4O43374 803 aa20.86■□□□□ 0.93
SUDS3-204ENST00000543473 NPR1P16066 1061 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms