RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 NAA35Q5VZE5 725 aa20.72■□□□□ 0.91
HDAC4-215ENST00000543185 KIAA1024Q9UPX6 916 aa20.72■□□□□ 0.91
HDAC4-215ENST00000543185 MEIS1O00470 390 aa20.72■□□□□ 0.91
HDAC4-215ENST00000543185 CHL1O00533 1208 aa20.72■□□□□ 0.91
HDAC4-215ENST00000543185 MYL10Q9BUA6 226 aa20.72■□□□□ 0.91
HDAC4-215ENST00000543185 EPN3Q9H201 632 aa20.72■□□□□ 0.91
HDAC4-215ENST00000543185 SLCO1A2P46721 670 aa20.72■□□□□ 0.91
HDAC4-215ENST00000543185 XKR9Q5GH70 373 aa20.72■□□□□ 0.91
HDAC4-215ENST00000543185 TTLL11Q8NHH1 800 aa20.72■□□□□ 0.91
HDAC4-215ENST00000543185 ACCSQ96QU6 501 aa20.72■□□□□ 0.91
HDAC4-215ENST00000543185 PCDHA4Q9UN74 947 aa20.72■□□□□ 0.91
HDAC4-215ENST00000543185 ZMYND10O75800 440 aa20.72■□□□□ 0.91
HDAC4-215ENST00000543185 KDM4CQ9H3R0 1056 aa20.72■□□□□ 0.91
HDAC4-215ENST00000543185 AS3MTQ9HBK9 375 aa20.72■□□□□ 0.91
HDAC4-215ENST00000543185 WDR17Q8IZU2 1322 aa20.72■□□□□ 0.91
HDAC4-215ENST00000543185 MFAP3LO75121 409 aa20.72■□□□□ 0.91
HDAC4-215ENST00000543185 HSPA13P48723 471 aa20.72■□□□□ 0.91
HDAC4-215ENST00000543185 SPDYE2BA6NHP3 402 aa20.72■□□□□ 0.91
HDAC4-215ENST00000543185 PRR23D1E9PI22 279 aaPredicted RBP20.72■□□□□ 0.91
HDAC4-215ENST00000543185 ADAMTS2O95450 1211 aa20.72■□□□□ 0.91
HDAC4-215ENST00000543185 SPDYE6P0CI01 402 aa20.72■□□□□ 0.91
HDAC4-215ENST00000543185 PRR23D2P0DMB1 279 aaPredicted RBP20.72■□□□□ 0.91
HDAC4-215ENST00000543185 PNMA1Q8ND90 353 aa20.72■□□□□ 0.91
HDAC4-215ENST00000543185 ZNF555Q8NEP9 628 aa20.72■□□□□ 0.91
HDAC4-215ENST00000543185 GOLGA8JA6NMD2 632 aa20.72■□□□□ 0.91
HDAC4-215ENST00000543185 CALB1P05937 261 aa20.72■□□□□ 0.91
HDAC4-215ENST00000543185 TRADDQ15628 312 aa20.72■□□□□ 0.91
HDAC4-215ENST00000543185 RDH13Q8NBN7 331 aa20.72■□□□□ 0.91
HDAC4-215ENST00000543185 ECT2Q9H8V3 914 aa20.71■□□□□ 0.91
HDAC4-215ENST00000543185 GSNP06396 782 aa20.71■□□□□ 0.91
HDAC4-215ENST00000543185 PBXIP1Q96AQ6 731 aa20.71■□□□□ 0.91
HDAC4-215ENST00000543185 SCRN1Q12765 414 aa20.71■□□□□ 0.91
HDAC4-215ENST00000543185 CFAP36Q96G28 342 aa20.71■□□□□ 0.91
HDAC4-215ENST00000543185 GPBP1L1Q9HC44 474 aaPredicted RBP20.71■□□□□ 0.91
HDAC4-215ENST00000543185 EFTUD2Q15029 972 aaKnown RBP eCLIP20.71■□□□□ 0.919e-7■■■□□ 18.9
HDAC4-215ENST00000543185 SPDYE1Q8NFV5 336 aaPredicted RBP20.71■□□□□ 0.91
HDAC4-215ENST00000543185 MAML3Q96JK9 1138 aa20.71■□□□□ 0.91
HDAC4-215ENST00000543185 XPAP23025 273 aaPredicted RBP20.71■□□□□ 0.91
HDAC4-215ENST00000543185 CDHR1Q96JP9 859 aa20.71■□□□□ 0.91
HDAC4-215ENST00000543185 MAP2P11137 1827 aaKnown RBP20.71■□□□□ 0.91
HDAC4-215ENST00000543185 HORMAD1Q86X24 394 aa20.71■□□□□ 0.91
HDAC4-215ENST00000543185 GJA10Q969M2 543 aa20.71■□□□□ 0.91
HDAC4-215ENST00000543185 H0Y3Z8 333 aa20.71■□□□□ 0.91
HDAC4-215ENST00000543185 HAUS5O94927 633 aa20.71■□□□□ 0.91
HDAC4-215ENST00000543185 CCND1P24385 295 aa20.71■□□□□ 0.91
HDAC4-215ENST00000543185 GUCY1A3Q02108 690 aa20.71■□□□□ 0.91
HDAC4-215ENST00000543185 INPP5AQ14642 412 aa20.71■□□□□ 0.91
HDAC4-215ENST00000543185 DDX42Q86XP3 938 aaKnown RBP eCLIP20.71■□□□□ 0.91
HDAC4-215ENST00000543185 CPSF3Q9UKF6 684 aaKnown RBP20.71■□□□□ 0.91
HDAC4-215ENST00000543185 RGS9BPQ6ZS82 235 aa20.7■□□□□ 0.9
HDAC4-215ENST00000543185 ELAC2Q9BQ52 826 aaKnown RBP20.7■□□□□ 0.9
HDAC4-215ENST00000543185 SUFUQ9UMX1 484 aa20.7■□□□□ 0.9
HDAC4-215ENST00000543185 NLRP14Q86W24 1093 aa20.7■□□□□ 0.9
HDAC4-215ENST00000543185 EPAS1Q99814 870 aa20.7■□□□□ 0.9
HDAC4-215ENST00000543185 SMYD3Q9H7B4 428 aa20.7■□□□□ 0.9
HDAC4-215ENST00000543185 SERPINB1P30740 379 aa20.7■□□□□ 0.9
HDAC4-215ENST00000543185 CHRNA3P32297 505 aa20.7■□□□□ 0.9
HDAC4-215ENST00000543185 CIITAP33076 1130 aa20.7■□□□□ 0.9
HDAC4-215ENST00000543185 EIF4A3P38919 411 aaKnown RBP20.7■□□□□ 0.9
HDAC4-215ENST00000543185 TNIP2Q8NFZ5 429 aa20.7■□□□□ 0.9
HDAC4-215ENST00000543185 TAF1DQ9H5J8 278 aaPredicted RBP20.7■□□□□ 0.9
HDAC4-215ENST00000543185 ASAP2O43150 1006 aa20.7■□□□□ 0.9
HDAC4-215ENST00000543185 CXCR5P32302 372 aa20.7■□□□□ 0.9
HDAC4-215ENST00000543185 MYLK4Q86YV6 388 aaPredicted RBP20.7■□□□□ 0.9
HDAC4-215ENST00000543185 ANKRD27Q96NW4 1050 aa20.7■□□□□ 0.9
HDAC4-215ENST00000543185 NACC1Q96RE7 527 aa20.7■□□□□ 0.9
HDAC4-215ENST00000543185 EHD2Q9NZN4 543 aa20.7■□□□□ 0.9
HDAC4-215ENST00000543185 STAMQ92783 540 aa20.7■□□□□ 0.9
HDAC4-215ENST00000543185 ETNK1Q9HBU6 452 aa20.7■□□□□ 0.9
HDAC4-215ENST00000543185 PCDHA5Q9Y5H7 936 aa20.7■□□□□ 0.9
HDAC4-215ENST00000543185 FAM133AQ8N9E0 248 aa20.7■□□□□ 0.9
HDAC4-215ENST00000543185 PARVGQ9HBI0 331 aa20.7■□□□□ 0.9
HDAC4-215ENST00000543185 NUMA1Q14980 2115 aa20.7■□□□□ 0.9
HDAC4-215ENST00000543185 IP6K1Q92551 441 aa20.7■□□□□ 0.9
HDAC4-215ENST00000543185 UBN1Q9NPG3 1134 aa20.7■□□□□ 0.9
HDAC4-215ENST00000543185 KLRF2D3W0D1 207 aa20.69■□□□□ 0.9
HDAC4-215ENST00000543185 HLA-DPA1P20036 260 aa20.69■□□□□ 0.9
HDAC4-215ENST00000543185 RAD23BP54727 409 aa20.69■□□□□ 0.9
HDAC4-215ENST00000543185 TIMM10P62072 90 aa20.69■□□□□ 0.9
HDAC4-215ENST00000543185 DTX3LQ8TDB6 740 aa20.69■□□□□ 0.9
HDAC4-215ENST00000543185 WDR11Q9BZH6 1224 aa20.69■□□□□ 0.9
HDAC4-215ENST00000543185 EDEM3Q9BZQ6 932 aa20.69■□□□□ 0.9
HDAC4-215ENST00000543185 SLITRK6Q9H5Y7 841 aa20.69■□□□□ 0.9
HDAC4-215ENST00000543185 MAGOHP61326 146 aaKnown RBP20.69■□□□□ 0.9
HDAC4-215ENST00000543185 KPNB1Q14974 876 aaKnown RBP20.69■□□□□ 0.9
HDAC4-215ENST00000543185 C4orf50Q6ZRC1 276 aa20.69■□□□□ 0.9
HDAC4-215ENST00000543185 NDUFAF2Q8N183 169 aa20.69■□□□□ 0.9
HDAC4-215ENST00000543185 OLA1Q9NTK5 396 aaKnown RBP20.69■□□□□ 0.9
HDAC4-215ENST00000543185 HIC1Q14526 733 aa20.69■□□□□ 0.9
HDAC4-215ENST00000543185 DNAL1Q4LDG9 190 aa20.69■□□□□ 0.9
HDAC4-215ENST00000543185 HSPA1AP0DMV8 641 aaKnown RBP20.69■□□□□ 0.9
HDAC4-215ENST00000543185 HSPA1BP0DMV9 641 aaKnown RBP20.69■□□□□ 0.9
HDAC4-215ENST00000543185 ZNF711Q9Y462 761 aa20.69■□□□□ 0.9
HDAC4-215ENST00000543185 WDR47O94967 919 aa20.69■□□□□ 0.9
HDAC4-215ENST00000543185 KCNJ6P48051 423 aa20.69■□□□□ 0.9
HDAC4-215ENST00000543185 SLC12A1Q13621 1099 aa20.69■□□□□ 0.9
HDAC4-215ENST00000543185 SSH3Q8TE77 659 aa20.69■□□□□ 0.9
HDAC4-215ENST00000543185 SLC7A3Q8WY07 619 aa20.69■□□□□ 0.9
HDAC4-215ENST00000543185 THAP11Q96EK4 314 aa20.69■□□□□ 0.9
HDAC4-215ENST00000543185 NRBP1Q9UHY1 535 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 149.2 ms