RNA–Protein interactions for RNA: ENST00000542996.6

CALU-206, Transcript of calumenin, humanhuman

TSL 1 (best) BASIC

Gene CALU, Length 4,225 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALU-206ENST00000542996 RNPC3Q96LT9 517 aaKnown RBP11.69□□□□□ -0.54
CALU-206ENST00000542996 AK8Q96MA6 479 aa11.69□□□□□ -0.54
CALU-206ENST00000542996 TXLNGYQ9BZA5 131 aa11.69□□□□□ -0.54
CALU-206ENST00000542996 DHX36Q9H2U1 1008 aaKnown RBP11.69□□□□□ -0.54
CALU-206ENST00000542996 PANK4Q9NVE7 773 aa11.69□□□□□ -0.54
CALU-206ENST00000542996 C6orf229H3BNL8 230 aa11.69□□□□□ -0.54
CALU-206ENST00000542996 CREB1P16220 341 aa11.69□□□□□ -0.54
CALU-206ENST00000542996 XBP1P17861 261 aa11.69□□□□□ -0.54
CALU-206ENST00000542996 MTIF2P46199 727 aaKnown RBP11.69□□□□□ -0.54
CALU-206ENST00000542996 LLGL1Q15334 1064 aa11.69□□□□□ -0.54
CALU-206ENST00000542996 NAB2Q15742 525 aa11.69□□□□□ -0.54
CALU-206ENST00000542996 SCFD2Q8WU76 684 aa11.69□□□□□ -0.54
CALU-206ENST00000542996 KRT35Q92764 455 aa11.69□□□□□ -0.54
CALU-206ENST00000542996 PCDHB18PQ96TA0 734 aa11.69□□□□□ -0.54
CALU-206ENST00000542996 F5H6K3 240 aa11.69□□□□□ -0.54
CALU-206ENST00000542996 TTLL1O95922 423 aa11.69□□□□□ -0.54
CALU-206ENST00000542996 TUBB4AP04350 444 aa11.69□□□□□ -0.54
CALU-206ENST00000542996 UCHL3P15374 230 aa11.69□□□□□ -0.54
CALU-206ENST00000542996 CRKP46108 304 aa11.69□□□□□ -0.54
CALU-206ENST00000542996 MMP14P50281 582 aa11.69□□□□□ -0.54
CALU-206ENST00000542996 KLRC3Q07444 240 aa11.69□□□□□ -0.54
CALU-206ENST00000542996 CDC37Q16543 378 aaPredicted RBP11.69□□□□□ -0.54
CALU-206ENST00000542996 MAN2A1Q16706 1144 aa11.69□□□□□ -0.54
CALU-206ENST00000542996 IQCEQ6IPM2 695 aa11.69□□□□□ -0.54
CALU-206ENST00000542996 TTC27Q6P3X3 843 aa11.69□□□□□ -0.54
CALU-206ENST00000542996 C1orf186Q6ZWK4 172 aa11.69□□□□□ -0.54
CALU-206ENST00000542996 OTOP1Q7RTM1 612 aa11.69□□□□□ -0.54
CALU-206ENST00000542996 KRT25Q7Z3Z0 450 aa11.69□□□□□ -0.54
CALU-206ENST00000542996 METTL13Q8N6R0 699 aa11.69□□□□□ -0.54
CALU-206ENST00000542996 ZNF526Q8TF50 670 aaPredicted RBP11.69□□□□□ -0.54
CALU-206ENST00000542996 PFASO15067 1338 aa11.69□□□□□ -0.54
CALU-206ENST00000542996 TRIM49P0CI25 452 aa11.68□□□□□ -0.54
CALU-206ENST00000542996 TRIM49CP0CI26 452 aa11.68□□□□□ -0.54
CALU-206ENST00000542996 HDXQ7Z353 690 aa11.68□□□□□ -0.54
CALU-206ENST00000542996 JADE2Q9NQC1 790 aa11.68□□□□□ -0.54
CALU-206ENST00000542996 NAGPAQ9UK23 515 aa11.68□□□□□ -0.54
CALU-206ENST00000542996 SAMM50Q9Y512 469 aa11.68□□□□□ -0.54
CALU-206ENST00000542996 RGL2O15211 777 aa11.68□□□□□ -0.54
CALU-206ENST00000542996 DDX3YO15523 660 aaKnown RBP11.68□□□□□ -0.54
CALU-206ENST00000542996 GRIN3BO60391 1043 aa11.68□□□□□ -0.54
CALU-206ENST00000542996 BMP15O95972 392 aa11.68□□□□□ -0.54
CALU-206ENST00000542996 FNTAP49354 379 aa11.68□□□□□ -0.54
CALU-206ENST00000542996 ADCY7P51828 1080 aa11.68□□□□□ -0.54
CALU-206ENST00000542996 ARHGAP4P98171 946 aa11.68□□□□□ -0.54
CALU-206ENST00000542996 PRR16Q569H4 304 aa11.68□□□□□ -0.54
CALU-206ENST00000542996 BTBD6Q96KE9 485 aa11.68□□□□□ -0.54
CALU-206ENST00000542996 JPH2Q9BR39 696 aaPredicted RBP11.68□□□□□ -0.54
CALU-206ENST00000542996 LSM14BQ9BX40 385 aaKnown RBP11.68□□□□□ -0.54
CALU-206ENST00000542996 PSTPIP2Q9H939 334 aa11.68□□□□□ -0.54
CALU-206ENST00000542996 MYO1AQ9UBC5 1043 aa11.68□□□□□ -0.54
CALU-206ENST00000542996 PCDHA12Q9UN75 941 aa11.68□□□□□ -0.54
CALU-206ENST00000542996 PCDHA1Q9Y5I3 950 aa11.68□□□□□ -0.54
CALU-206ENST00000542996 PVALEFA0A1B0GWK0 134 aa11.68□□□□□ -0.54
CALU-206ENST00000542996 GOLGA6L9A6NEM1 432 aa11.68□□□□□ -0.54
CALU-206ENST00000542996 PPEF1O14829 653 aaPredicted RBP11.68□□□□□ -0.54
CALU-206ENST00000542996 RINT1Q6NUQ1 792 aa11.68□□□□□ -0.54
CALU-206ENST00000542996 SLFN11Q7Z7L1 901 aa11.68□□□□□ -0.54
CALU-206ENST00000542996 FAM228AQ86W67 206 aa11.68□□□□□ -0.54
CALU-206ENST00000542996 C10orf67Q8IYJ2 551 aa11.68□□□□□ -0.54
CALU-206ENST00000542996 CEP112Q8N8E3 955 aa11.68□□□□□ -0.54
CALU-206ENST00000542996 NUMBLQ9Y6R0 609 aa11.68□□□□□ -0.54
CALU-206ENST00000542996 PPP1R37O75864 691 aa11.68□□□□□ -0.54
CALU-206ENST00000542996 ADSSP30520 456 aa11.68□□□□□ -0.54
CALU-206ENST00000542996 ZNF568Q3ZCX4 644 aa11.68□□□□□ -0.54
CALU-206ENST00000542996 SV2BQ7L1I2 683 aa11.68□□□□□ -0.54
CALU-206ENST00000542996 ANKLE1Q8NAG6 615 aa11.68□□□□□ -0.54
CALU-206ENST00000542996 PWWP2AQ96N64 755 aa11.68□□□□□ -0.54
CALU-206ENST00000542996 ANO3Q9BYT9 981 aa11.68□□□□□ -0.54
CALU-206ENST00000542996 BHMT2Q9H2M3 363 aa11.68□□□□□ -0.54
CALU-206ENST00000542996 FRMPD4Q14CM0 1322 aa11.67□□□□□ -0.54
CALU-206ENST00000542996 LAD1O00515 517 aa11.67□□□□□ -0.54
CALU-206ENST00000542996 ATP9AO75110 1047 aa11.67□□□□□ -0.54
CALU-206ENST00000542996 CHRNB2P17787 502 aa11.67□□□□□ -0.54
CALU-206ENST00000542996 GUCY2FP51841 1108 aa11.67□□□□□ -0.54
CALU-206ENST00000542996 PDCLQ13371 301 aa11.67□□□□□ -0.54
CALU-206ENST00000542996 ZNF804AQ7Z570 1209 aa11.67□□□□□ -0.54
CALU-206ENST00000542996 CCDC170Q8IYT3 715 aa11.67□□□□□ -0.54
CALU-206ENST00000542996 SECISBP2LQ93073 1101 aaKnown RBP11.67□□□□□ -0.54
CALU-206ENST00000542996 EMILIN3Q9NT22 766 aa11.67□□□□□ -0.54
CALU-206ENST00000542996 COL4A3BPQ9Y5P4 624 aa11.67□□□□□ -0.54
CALU-206ENST00000542996 ATMINO43313 823 aaPredicted RBP11.67□□□□□ -0.54
CALU-206ENST00000542996 EVI5O60447 810 aa11.67□□□□□ -0.54
CALU-206ENST00000542996 PSMD10O75832 226 aa11.67□□□□□ -0.54
CALU-206ENST00000542996 SMARCA1P28370 1054 aa11.67□□□□□ -0.54
CALU-206ENST00000542996 PPP3CAQ08209 521 aa11.67□□□□□ -0.54
CALU-206ENST00000542996 ITGB3BPQ13352 177 aaPredicted RBP11.67□□□□□ -0.54
CALU-206ENST00000542996 SIX1Q15475 284 aaPredicted RBP11.67□□□□□ -0.54
CALU-206ENST00000542996 AOC3Q16853 763 aa11.67□□□□□ -0.54
CALU-206ENST00000542996 C2CD6Q53TS8 623 aa11.67□□□□□ -0.54
CALU-206ENST00000542996 SND1Q7KZF4 910 aaKnown RBP eCLIP11.67□□□□□ -0.548e-13■■■■□ 21.5
CALU-206ENST00000542996 ARHGEF19Q8IW93 802 aa11.67□□□□□ -0.54
CALU-206ENST00000542996 SEMA4DQ92854 862 aa11.67□□□□□ -0.54
CALU-206ENST00000542996 HAPLN2Q9GZV7 340 aa11.67□□□□□ -0.54
CALU-206ENST00000542996 RRP15Q9Y3B9 282 aaKnown RBP11.67□□□□□ -0.54
CALU-206ENST00000542996 PPATQ06203 517 aa11.67□□□□□ -0.54
CALU-206ENST00000542996 SLC18A3Q16572 532 aa11.67□□□□□ -0.54
CALU-206ENST00000542996 PRUNE1Q86TP1 453 aa11.67□□□□□ -0.54
CALU-206ENST00000542996 DDX47Q9H0S4 455 aaKnown RBP11.67□□□□□ -0.54
CALU-206ENST00000542996 JRKLQ9Y4A0 524 aa11.67□□□□□ -0.54
CALU-206ENST00000542996 ADGRA3Q8IWK6 1321 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms