RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 MYOM3Q5VTT5 1437 aa7.29□□□□□ -1.24
XRCC4-206ENST00000542685 B4GALT4O60513 344 aa7.29□□□□□ -1.24
XRCC4-206ENST00000542685 COL6A1P12109 1028 aa7.29□□□□□ -1.24
XRCC4-206ENST00000542685 SUMO1P63165 101 aaKnown RBP7.29□□□□□ -1.24
XRCC4-206ENST00000542685 ADAM17P78536 824 aa7.29□□□□□ -1.24
XRCC4-206ENST00000542685 MAMDC2Q7Z304 686 aaPredicted RBP7.29□□□□□ -1.24
XRCC4-206ENST00000542685 KLHL36Q8N4N3 616 aa7.29□□□□□ -1.24
XRCC4-206ENST00000542685 STPG3Q8N7X2 389 aa7.29□□□□□ -1.24
XRCC4-206ENST00000542685 CHST13Q8NET6 341 aa7.29□□□□□ -1.24
XRCC4-206ENST00000542685 IGDCC4Q8TDY8 1250 aa7.29□□□□□ -1.24
XRCC4-206ENST00000542685 CHMP4AQ9BY43 222 aa7.29□□□□□ -1.24
XRCC4-206ENST00000542685 JADE2Q9NQC1 790 aa7.29□□□□□ -1.24
XRCC4-206ENST00000542685 PPP4R1LQ9P1A2 415 aa7.29□□□□□ -1.24
XRCC4-206ENST00000542685 ARHGAP20Q9P2F6 1191 aa7.29□□□□□ -1.24
XRCC4-206ENST00000542685 VIRMAQ69YN4 1812 aaKnown RBP7.29□□□□□ -1.24
XRCC4-206ENST00000542685 NCOA1Q15788 1441 aa7.28□□□□□ -1.24
XRCC4-206ENST00000542685 SMG6Q86US8 1419 aaKnown RBP7.28□□□□□ -1.24
XRCC4-206ENST00000542685 TCRBV5S4A2TA0A5A2 114 aa7.28□□□□□ -1.24
XRCC4-206ENST00000542685 ACOT7O00154 380 aa7.28□□□□□ -1.24
XRCC4-206ENST00000542685 ENO2P09104 434 aaPredicted RBP7.28□□□□□ -1.24
XRCC4-206ENST00000542685 FAM153BP0C7A2 387 aa7.28□□□□□ -1.24
XRCC4-206ENST00000542685 EPHA5P54756 1037 aa7.28□□□□□ -1.24
XRCC4-206ENST00000542685 GUCY1A3Q02108 690 aa7.28□□□□□ -1.24
XRCC4-206ENST00000542685 SLC20A2Q08357 652 aa7.28□□□□□ -1.24
XRCC4-206ENST00000542685 DDX10Q13206 875 aaKnown RBP7.28□□□□□ -1.24
XRCC4-206ENST00000542685 PUM1Q14671 1186 aaKnown RBP eCLIP7.28□□□□□ -1.24
XRCC4-206ENST00000542685 SMAD2Q15796 467 aaKnown RBP7.28□□□□□ -1.24
XRCC4-206ENST00000542685 PKN3Q6P5Z2 889 aa7.28□□□□□ -1.24
XRCC4-206ENST00000542685 ARHGAP36Q6ZRI8 547 aa7.28□□□□□ -1.24
XRCC4-206ENST00000542685 SH3RF2Q8TEC5 729 aa7.28□□□□□ -1.24
XRCC4-206ENST00000542685 SSBP3Q9BWW4 388 aaPredicted RBP7.28□□□□□ -1.24
XRCC4-206ENST00000542685 CATSPERZQ9NTU4 200 aa7.28□□□□□ -1.24
XRCC4-206ENST00000542685 ST6GALNAC2Q9UJ37 374 aa7.28□□□□□ -1.24
XRCC4-206ENST00000542685 LAS1LQ9Y4W2 734 aaKnown RBP7.28□□□□□ -1.24
XRCC4-206ENST00000542685 GRIN2BQ13224 1484 aa7.28□□□□□ -1.24
XRCC4-206ENST00000542685 KDM2BQ8NHM5 1336 aa7.27□□□□□ -1.24
XRCC4-206ENST00000542685 NPEPPSL1A6NEC2 478 aa7.27□□□□□ -1.25
XRCC4-206ENST00000542685 KLHL18O94889 574 aa7.27□□□□□ -1.25
XRCC4-206ENST00000542685 LETM1O95202 739 aaPredicted RBP7.27□□□□□ -1.25
XRCC4-206ENST00000542685 C6orf222P0C671 652 aaPredicted RBP7.27□□□□□ -1.25
XRCC4-206ENST00000542685 SRGAP2CP0DJJ0 459 aa7.27□□□□□ -1.25
XRCC4-206ENST00000542685 RGS3P49796 1198 aa7.27□□□□□ -1.25
XRCC4-206ENST00000542685 PPP2CBP62714 309 aa7.27□□□□□ -1.25
XRCC4-206ENST00000542685 PPP2CAP67775 309 aa7.27□□□□□ -1.25
XRCC4-206ENST00000542685 DMTNQ08495 405 aa7.27□□□□□ -1.25
XRCC4-206ENST00000542685 BTBD8Q5XKL5 378 aa7.27□□□□□ -1.25
XRCC4-206ENST00000542685 ARHGEF18Q6ZSZ5 1173 aa7.27□□□□□ -1.25
XRCC4-206ENST00000542685 EXOC2Q96KP1 924 aa7.27□□□□□ -1.25
XRCC4-206ENST00000542685 HIRIP3Q9BW71 556 aaPredicted RBP7.27□□□□□ -1.25
XRCC4-206ENST00000542685 KRTAP4-5Q9BYR2 181 aa7.27□□□□□ -1.25
XRCC4-206ENST00000542685 GTPBP4Q9BZE4 634 aaKnown RBP7.27□□□□□ -1.25
XRCC4-206ENST00000542685 PDGFDQ9GZP0 370 aaPredicted RBP7.27□□□□□ -1.25
XRCC4-206ENST00000542685 SLC39A2Q9NP94 309 aa7.27□□□□□ -1.25
XRCC4-206ENST00000542685 RIC8BQ9NVN3 520 aa7.27□□□□□ -1.25
XRCC4-206ENST00000542685 ZNF839A8K0R7 811 aa7.26□□□□□ -1.25
XRCC4-206ENST00000542685 KNG1P01042 644 aa7.26□□□□□ -1.25
XRCC4-206ENST00000542685 PYGMP11217 842 aa7.26□□□□□ -1.25
XRCC4-206ENST00000542685 KRT15P19012 456 aa7.26□□□□□ -1.25
XRCC4-206ENST00000542685 PTMSP20962 102 aa7.26□□□□□ -1.25
XRCC4-206ENST00000542685 EP400NLQ6ZTU2 488 aa7.26□□□□□ -1.25
XRCC4-206ENST00000542685 OSTM1Q86WC4 334 aa7.26□□□□□ -1.25
XRCC4-206ENST00000542685 PCDH19Q8TAB3 1148 aa7.26□□□□□ -1.25
XRCC4-206ENST00000542685 FBXW5Q969U6 566 aa7.26□□□□□ -1.25
XRCC4-206ENST00000542685 TACO1Q9BSH4 297 aaKnown RBP7.26□□□□□ -1.25
XRCC4-206ENST00000542685 DHRS4Q9BTZ2 278 aa7.26□□□□□ -1.25
XRCC4-206ENST00000542685 CHMP4BQ9H444 224 aaKnown RBP7.26□□□□□ -1.25
XRCC4-206ENST00000542685 SRPK3Q9UPE1 567 aa7.26□□□□□ -1.25
XRCC4-206ENST00000542685 PCDHA9Q9Y5H5 950 aa7.26□□□□□ -1.25
XRCC4-206ENST00000542685 MIA2Q96PC5 1412 aa7.26□□□□□ -1.25
XRCC4-206ENST00000542685 CADPSQ9ULU8 1353 aa7.25□□□□□ -1.25
XRCC4-206ENST00000542685 PDE6AP16499 860 aa7.25□□□□□ -1.25
XRCC4-206ENST00000542685 GABREP78334 506 aa7.25□□□□□ -1.25
XRCC4-206ENST00000542685 ST5P78524 1137 aa7.25□□□□□ -1.25
XRCC4-206ENST00000542685 GPR19Q15760 415 aa7.25□□□□□ -1.25
XRCC4-206ENST00000542685 CPZQ66K79 652 aa7.25□□□□□ -1.25
XRCC4-206ENST00000542685 Q6ZUG5 572 aa7.25□□□□□ -1.25
XRCC4-206ENST00000542685 PTRH1Q86Y79 214 aaKnown RBP7.25□□□□□ -1.25
XRCC4-206ENST00000542685 NLGN4XQ8N0W4 816 aa7.25□□□□□ -1.25
XRCC4-206ENST00000542685 TTC9BQ8N6N2 239 aa7.25□□□□□ -1.25
XRCC4-206ENST00000542685 C8orf37Q96NL8 207 aa7.25□□□□□ -1.25
XRCC4-206ENST00000542685 DEPDC7Q96QD5 511 aa7.25□□□□□ -1.25
XRCC4-206ENST00000542685 PTPN18Q99952 460 aa7.25□□□□□ -1.25
XRCC4-206ENST00000542685 KRTAP3-1Q9BYR8 98 aa7.25□□□□□ -1.25
XRCC4-206ENST00000542685 KCND1Q9NSA2 647 aa7.25□□□□□ -1.25
XRCC4-206ENST00000542685 ADAM29Q9UKF5 820 aa7.25□□□□□ -1.25
XRCC4-206ENST00000542685 MYRFQ9Y2G1 1151 aa7.25□□□□□ -1.25
XRCC4-206ENST00000542685 MRPS23Q9Y3D9 190 aaKnown RBP7.25□□□□□ -1.25
XRCC4-206ENST00000542685 ZMYM4Q5VZL5 1548 aa7.25□□□□□ -1.25
XRCC4-206ENST00000542685 CCDC144AA2RUR9 1427 aa7.25□□□□□ -1.25
XRCC4-206ENST00000542685 DENND4BO75064 1496 aaPredicted RBP7.24□□□□□ -1.25
XRCC4-206ENST00000542685 TEX14Q8IWB6 1497 aa7.24□□□□□ -1.25
XRCC4-206ENST00000542685 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.24□□□□□ -1.25
XRCC4-206ENST00000542685 FAM221BA6H8Z2 402 aa7.24□□□□□ -1.25
XRCC4-206ENST00000542685 FAM90A27PA6NNH2 459 aa7.24□□□□□ -1.25
XRCC4-206ENST00000542685 ARVCFO00192 962 aa7.24□□□□□ -1.25
XRCC4-206ENST00000542685 CRTAMO95727 393 aa7.24□□□□□ -1.25
XRCC4-206ENST00000542685 IL18BPO95998 194 aa7.24□□□□□ -1.25
XRCC4-206ENST00000542685 CHGBP05060 677 aa7.24□□□□□ -1.25
XRCC4-206ENST00000542685 ZNF20P17024 532 aa7.24□□□□□ -1.25
XRCC4-206ENST00000542685 PTPN1P18031 435 aaKnown RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms