RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 MOCS3O95396 460 aa11.07□□□□□ -0.64
TOP3A-208ENST00000542570 RPS12P25398 132 aaKnown RBP11.07□□□□□ -0.64
TOP3A-208ENST00000542570 YARSP54577 528 aaKnown RBP11.07□□□□□ -0.64
TOP3A-208ENST00000542570 HAUS6Q7Z4H7 955 aa11.07□□□□□ -0.64
TOP3A-208ENST00000542570 P2RX7Q99572 595 aaKnown RBP11.07□□□□□ -0.64
TOP3A-208ENST00000542570 RUSC1Q9BVN2 902 aa11.07□□□□□ -0.64
TOP3A-208ENST00000542570 JPH1Q9HDC5 661 aaPredicted RBP11.07□□□□□ -0.64
TOP3A-208ENST00000542570 TUBE1Q9UJT0 475 aa11.07□□□□□ -0.64
TOP3A-208ENST00000542570 MYO6Q9UM54 1294 aa11.07□□□□□ -0.64
TOP3A-208ENST00000542570 ZNF500O60304 480 aaPredicted RBP11.07□□□□□ -0.64
TOP3A-208ENST00000542570 MXI1P50539 228 aa11.07□□□□□ -0.64
TOP3A-208ENST00000542570 APBA1Q02410 837 aa11.07□□□□□ -0.64
TOP3A-208ENST00000542570 MESDQ14696 234 aa11.07□□□□□ -0.64
TOP3A-208ENST00000542570 KNOP1Q1ED39 458 aaKnown RBP11.07□□□□□ -0.64
TOP3A-208ENST00000542570 PDLIM2Q96JY6 352 aa11.07□□□□□ -0.64
TOP3A-208ENST00000542570 CCDC114Q96M63 670 aa11.07□□□□□ -0.64
TOP3A-208ENST00000542570 PSMD1Q99460 953 aa11.07□□□□□ -0.64
TOP3A-208ENST00000542570 NHEJ1Q9H9Q4 299 aaPredicted RBP11.07□□□□□ -0.64
TOP3A-208ENST00000542570 ZNF302Q9NR11 478 aa11.07□□□□□ -0.64
TOP3A-208ENST00000542570 SLC9A2Q9UBY0 812 aa11.07□□□□□ -0.64
TOP3A-208ENST00000542570 ZNF541Q9H0D2 1346 aa11.07□□□□□ -0.64
TOP3A-208ENST00000542570 LRRC53A6NM62 1247 aa11.07□□□□□ -0.64
TOP3A-208ENST00000542570 FUT2Q10981 343 aa11.07□□□□□ -0.64
TOP3A-208ENST00000542570 PASD1Q8IV76 773 aa11.07□□□□□ -0.64
TOP3A-208ENST00000542570 ANKRD13AQ8IZ07 590 aa11.07□□□□□ -0.64
TOP3A-208ENST00000542570 ADSSL1Q8N142 457 aa11.07□□□□□ -0.64
TOP3A-208ENST00000542570 CDHR1Q96JP9 859 aa11.07□□□□□ -0.64
TOP3A-208ENST00000542570 TBC1D22BQ9NU19 505 aa11.07□□□□□ -0.64
TOP3A-208ENST00000542570 HPSEQ9Y251 543 aa11.07□□□□□ -0.64
TOP3A-208ENST00000542570 CEP83Q9Y592 693 aa11.07□□□□□ -0.64
TOP3A-208ENST00000542570 PDS5AQ29RF7 1337 aaKnown RBP11.07□□□□□ -0.64
TOP3A-208ENST00000542570 EML1O00423 815 aa11.07□□□□□ -0.64
TOP3A-208ENST00000542570 EIF3JO75822 258 aaKnown RBP11.07□□□□□ -0.64
TOP3A-208ENST00000542570 PIK3CAP42336 1068 aa11.07□□□□□ -0.64
TOP3A-208ENST00000542570 CASP4P49662 377 aa11.07□□□□□ -0.64
TOP3A-208ENST00000542570 JAG1P78504 1218 aa11.07□□□□□ -0.64
TOP3A-208ENST00000542570 IFI16Q16666 785 aaKnown RBP11.07□□□□□ -0.64
TOP3A-208ENST00000542570 TRIM50Q86XT4 487 aa11.07□□□□□ -0.64
TOP3A-208ENST00000542570 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.07□□□□□ -0.64
TOP3A-208ENST00000542570 UHMK1Q8TAS1 419 aaKnown RBP11.07□□□□□ -0.64
TOP3A-208ENST00000542570 MXRA8Q9BRK3 442 aa11.07□□□□□ -0.64
TOP3A-208ENST00000542570 MSTO1Q9BUK6 570 aa11.07□□□□□ -0.64
TOP3A-208ENST00000542570 SELENOOQ9BVL4 669 aa11.07□□□□□ -0.64
TOP3A-208ENST00000542570 UNC45AQ9H3U1 944 aa11.07□□□□□ -0.64
TOP3A-208ENST00000542570 MAGEF1Q9HAY2 307 aa11.07□□□□□ -0.64
TOP3A-208ENST00000542570 ADARB2Q9NS39 739 aaKnown RBP11.07□□□□□ -0.64
TOP3A-208ENST00000542570 C1orf112Q9NSG2 853 aa11.07□□□□□ -0.64
TOP3A-208ENST00000542570 TRIM10Q9UDY6 481 aa11.07□□□□□ -0.64
TOP3A-208ENST00000542570 CPA4Q9UI42 421 aa11.07□□□□□ -0.64
TOP3A-208ENST00000542570 PPP1R11O60927 126 aaPredicted RBP11.06□□□□□ -0.64
TOP3A-208ENST00000542570 GNA14O95837 355 aa11.06□□□□□ -0.64
TOP3A-208ENST00000542570 MYL3P08590 195 aa11.06□□□□□ -0.64
TOP3A-208ENST00000542570 GFPT1Q06210 699 aaPredicted RBP11.06□□□□□ -0.64
TOP3A-208ENST00000542570 PDIA5Q14554 519 aa11.06□□□□□ -0.64
TOP3A-208ENST00000542570 IL17AQ16552 155 aa11.06□□□□□ -0.64
TOP3A-208ENST00000542570 RNF149Q8NC42 400 aa11.06□□□□□ -0.64
TOP3A-208ENST00000542570 SPC25Q9HBM1 224 aa11.06□□□□□ -0.64
TOP3A-208ENST00000542570 METTL14Q9HCE5 456 aaKnown RBP11.06□□□□□ -0.64
TOP3A-208ENST00000542570 CD2APQ9Y5K6 639 aa11.06□□□□□ -0.64
TOP3A-208ENST00000542570 PPP1R3GB7ZBB8 358 aa11.06□□□□□ -0.64
TOP3A-208ENST00000542570 GOLGA8SH3BPF8 625 aa11.06□□□□□ -0.64
TOP3A-208ENST00000542570 NFKBIEO00221 500 aa11.06□□□□□ -0.64
TOP3A-208ENST00000542570 NDUFA10O95299 355 aa11.06□□□□□ -0.64
TOP3A-208ENST00000542570 STAT5BP51692 787 aa11.06□□□□□ -0.64
TOP3A-208ENST00000542570 GJC2Q5T442 439 aaPredicted RBP11.06□□□□□ -0.64
TOP3A-208ENST00000542570 OPTNQ96CV9 577 aa11.06□□□□□ -0.64
TOP3A-208ENST00000542570 NAA15Q9BXJ9 866 aaKnown RBP11.06□□□□□ -0.64
TOP3A-208ENST00000542570 AP5M1Q9H0R1 490 aa11.06□□□□□ -0.64
TOP3A-208ENST00000542570 EHD4Q9H223 541 aa11.06□□□□□ -0.64
TOP3A-208ENST00000542570 IKZF4Q9H2S9 585 aa11.06□□□□□ -0.64
TOP3A-208ENST00000542570 EFCC1Q9HA90 598 aa11.06□□□□□ -0.64
TOP3A-208ENST00000542570 RNF19AQ9NV58 838 aa11.06□□□□□ -0.64
TOP3A-208ENST00000542570 GPRC5DQ9NZD1 345 aa11.06□□□□□ -0.64
TOP3A-208ENST00000542570 CGNQ9P2M7 1197 aaKnown RBP11.06□□□□□ -0.64
TOP3A-208ENST00000542570 PACSIN2Q9UNF0 486 aaPredicted RBP11.06□□□□□ -0.64
TOP3A-208ENST00000542570 MFAP3LO75121 409 aa11.06□□□□□ -0.64
TOP3A-208ENST00000542570 PSMC5P62195 406 aa11.06□□□□□ -0.64
TOP3A-208ENST00000542570 SETQ01105 290 aaPredicted RBP11.06□□□□□ -0.64
TOP3A-208ENST00000542570 VGLL4Q14135 290 aa11.06□□□□□ -0.64
TOP3A-208ENST00000542570 GJB7Q6PEY0 223 aa11.06□□□□□ -0.64
TOP3A-208ENST00000542570 FBXO16Q8IX29 292 aaPredicted RBP11.06□□□□□ -0.64
TOP3A-208ENST00000542570 POLR3FQ9H1D9 316 aaPredicted RBP11.06□□□□□ -0.64
TOP3A-208ENST00000542570 SLC5A4Q9NY91 659 aa11.06□□□□□ -0.64
TOP3A-208ENST00000542570 PPP1R9AQ9ULJ8 1098 aa11.06□□□□□ -0.64
TOP3A-208ENST00000542570 STK24Q9Y6E0 443 aa11.06□□□□□ -0.64
TOP3A-208ENST00000542570 ICAM1P05362 532 aa11.05□□□□□ -0.64
TOP3A-208ENST00000542570 H2AFZP0C0S5 128 aa11.05□□□□□ -0.64
TOP3A-208ENST00000542570 DESP17661 470 aa11.05□□□□□ -0.64
TOP3A-208ENST00000542570 GAP43P17677 238 aa11.05□□□□□ -0.64
TOP3A-208ENST00000542570 SLC9A1P19634 815 aa11.05□□□□□ -0.64
TOP3A-208ENST00000542570 PRPHP41219 470 aa11.05□□□□□ -0.64
TOP3A-208ENST00000542570 MKRN4PQ13434 485 aaPredicted RBP11.05□□□□□ -0.64
TOP3A-208ENST00000542570 RRP1BQ14684 758 aaKnown RBP11.05□□□□□ -0.64
TOP3A-208ENST00000542570 EPHA7Q15375 998 aa11.05□□□□□ -0.64
TOP3A-208ENST00000542570 RPS6KA1Q15418 735 aa11.05□□□□□ -0.64
TOP3A-208ENST00000542570 SCYL2Q6P3W7 929 aa11.05□□□□□ -0.64
TOP3A-208ENST00000542570 H2AFVQ71UI9 128 aa11.05□□□□□ -0.64
TOP3A-208ENST00000542570 IL31RAQ8NI17 732 aa11.05□□□□□ -0.64
TOP3A-208ENST00000542570 SYTL5Q8TDW5 730 aaPredicted RBP11.05□□□□□ -0.64
TOP3A-208ENST00000542570 UBE2Q2Q8WVN8 375 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms