RNA–Protein interactions for RNA: ENST00000542293.5

PAAF1-211, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-211ENST00000542293 TCF25Q9BQ70 676 aa18.19■□□□□ 0.5
PAAF1-211ENST00000542293 TMX1Q9H3N1 280 aa18.19■□□□□ 0.5
PAAF1-211ENST00000542293 VAT1LQ9HCJ6 419 aa18.19■□□□□ 0.5
PAAF1-211ENST00000542293 TUBE1Q9UJT0 475 aa18.19■□□□□ 0.5
PAAF1-211ENST00000542293 PADI3Q9ULW8 664 aa18.19■□□□□ 0.5
PAAF1-211ENST00000542293 USP24Q9UPU5 2620 aa18.19■□□□□ 0.5
PAAF1-211ENST00000542293 DENND4AQ7Z401 1863 aa18.18■□□□□ 0.5
PAAF1-211ENST00000542293 MBLAC1A4D2B0 266 aaPredicted RBP18.18■□□□□ 0.5
PAAF1-211ENST00000542293 TBKBP1A7MCY6 615 aa18.18■□□□□ 0.5
PAAF1-211ENST00000542293 MTHFRP42898 656 aa18.18■□□□□ 0.5
PAAF1-211ENST00000542293 ALX1Q15699 326 aa18.18■□□□□ 0.5
PAAF1-211ENST00000542293 GRIK4Q16099 956 aa18.18■□□□□ 0.5
PAAF1-211ENST00000542293 MARCH8Q5T0T0 291 aa18.18■□□□□ 0.5
PAAF1-211ENST00000542293 RIN2Q8WYP3 895 aaPredicted RBP18.18■□□□□ 0.5
PAAF1-211ENST00000542293 MRPS27Q92552 414 aaKnown RBP18.18■□□□□ 0.5
PAAF1-211ENST00000542293 ZBTB10Q96DT7 871 aa18.18■□□□□ 0.5
PAAF1-211ENST00000542293 ENTPD7Q9NQZ7 604 aa18.18■□□□□ 0.5
PAAF1-211ENST00000542293 TYW1Q9NV66 732 aaKnown RBP18.18■□□□□ 0.5
PAAF1-211ENST00000542293 LZTS1Q9Y250 596 aa18.18■□□□□ 0.5
PAAF1-211ENST00000542293 HCFC2Q9Y5Z7 792 aa18.18■□□□□ 0.5
PAAF1-211ENST00000542293 SQORQ9Y6N5 450 aa18.18■□□□□ 0.5
PAAF1-211ENST00000542293 PPP1R11O60927 126 aaPredicted RBP18.17■□□□□ 0.5
PAAF1-211ENST00000542293 SARSP49591 514 aaKnown RBP18.17■□□□□ 0.5
PAAF1-211ENST00000542293 MRPS9P82933 396 aaKnown RBP18.17■□□□□ 0.5
PAAF1-211ENST00000542293 PPFIA1Q13136 1202 aa18.17■□□□□ 0.5
PAAF1-211ENST00000542293 NEDD9Q14511 834 aa18.17■□□□□ 0.5
PAAF1-211ENST00000542293 FAM102BQ5T8I3 360 aa18.17■□□□□ 0.5
PAAF1-211ENST00000542293 SIX5Q8N196 739 aa18.17■□□□□ 0.5
PAAF1-211ENST00000542293 ZKSCAN3Q9BRR0 538 aa18.17■□□□□ 0.5
PAAF1-211ENST00000542293 CWH43Q9H720 699 aa18.17■□□□□ 0.5
PAAF1-211ENST00000542293 MAP3K20Q9NYL2 800 aaKnown RBP18.17■□□□□ 0.5
PAAF1-211ENST00000542293 SPATA31C2B4DYI2 1134 aa18.16■□□□□ 0.5
PAAF1-211ENST00000542293 DHX16O60231 1041 aaKnown RBP18.16■□□□□ 0.5
PAAF1-211ENST00000542293 FGAP02671 866 aa18.16■□□□□ 0.5
PAAF1-211ENST00000542293 PLCB3Q01970 1234 aa18.16■□□□□ 0.5
PAAF1-211ENST00000542293 SP4Q02446 784 aa18.16■□□□□ 0.5
PAAF1-211ENST00000542293 KANK3Q6NY19 840 aa18.16■□□□□ 0.5
PAAF1-211ENST00000542293 PLCD3Q8N3E9 789 aa18.16■□□□□ 0.5
PAAF1-211ENST00000542293 C12orf76Q8N812 135 aaPredicted RBP18.16■□□□□ 0.5
PAAF1-211ENST00000542293 PNMA1Q8ND90 353 aa18.16■□□□□ 0.5
PAAF1-211ENST00000542293 FEZF2Q8TBJ5 459 aa18.16■□□□□ 0.5
PAAF1-211ENST00000542293 AMNQ9BXJ7 453 aa18.16■□□□□ 0.5
PAAF1-211ENST00000542293 FAM49AQ9H0Q0 323 aaPredicted RBP18.16■□□□□ 0.5
PAAF1-211ENST00000542293 NGRNQ9NPE2 291 aaKnown RBP18.16■□□□□ 0.5
PAAF1-211ENST00000542293 RALYQ9UKM9 306 aaKnown RBP18.16■□□□□ 0.5
PAAF1-211ENST00000542293 USTQ9Y2C2 406 aa18.16■□□□□ 0.5
PAAF1-211ENST00000542293 PCDHB7Q9Y5E2 793 aa18.16■□□□□ 0.5
PAAF1-211ENST00000542293 GPR179Q6PRD1 2367 aa18.15■□□□□ 0.5
PAAF1-211ENST00000542293 MGEA5O60502 916 aa18.15■□□□□ 0.5
PAAF1-211ENST00000542293 ATXN1P54253 815 aaKnown RBP18.15■□□□□ 0.5
PAAF1-211ENST00000542293 HAND2P61296 217 aa18.15■□□□□ 0.5
PAAF1-211ENST00000542293 TMEM62Q0P6H9 643 aa18.15■□□□□ 0.5
PAAF1-211ENST00000542293 PAK2Q13177 524 aa18.15■□□□□ 0.5
PAAF1-211ENST00000542293 ASPRV1Q53RT3 343 aa18.15■□□□□ 0.5
PAAF1-211ENST00000542293 RARS2Q5T160 578 aaKnown RBP18.15■□□□□ 0.5
PAAF1-211ENST00000542293 INPP4AQ96PE3 977 aaPredicted RBP18.15■□□□□ 0.5
PAAF1-211ENST00000542293 CYP26B1Q9NR63 512 aa18.15■□□□□ 0.5
PAAF1-211ENST00000542293 DDX19BQ9UMR2 479 aa18.15■□□□□ 0.5
PAAF1-211ENST00000542293 DUSP12Q9UNI6 340 aa18.15■□□□□ 0.5
PAAF1-211ENST00000542293 TRPV2Q9Y5S1 764 aa18.15■□□□□ 0.5
PAAF1-211ENST00000542293 IGSF9BQ9UPX0 1349 aa18.15■□□□□ 0.5
PAAF1-211ENST00000542293 CHD8Q9HCK8 2581 aa18.15■□□□□ 0.5
PAAF1-211ENST00000542293 EOMESO95936 686 aa18.14■□□□□ 0.49
PAAF1-211ENST00000542293 MARK3P27448 753 aa18.14■□□□□ 0.49
PAAF1-211ENST00000542293 TDGQ13569 410 aa18.14■□□□□ 0.49
PAAF1-211ENST00000542293 GNPTABQ3T906 1256 aa18.14■□□□□ 0.49
PAAF1-211ENST00000542293 IER5Q5VY09 327 aa18.14■□□□□ 0.49
PAAF1-211ENST00000542293 KIAA1841Q6NSI8 718 aa18.14■□□□□ 0.49
PAAF1-211ENST00000542293 FCHSD1Q86WN1 690 aa18.14■□□□□ 0.49
PAAF1-211ENST00000542293 DGKHQ86XP1 1220 aa18.14■□□□□ 0.49
PAAF1-211ENST00000542293 PI4K2BQ8TCG2 481 aa18.14■□□□□ 0.49
PAAF1-211ENST00000542293 RTEL1Q9NZ71 1219 aa18.14■□□□□ 0.49
PAAF1-211ENST00000542293 DBR1Q9UK59 544 aaKnown RBP18.14■□□□□ 0.49
PAAF1-211ENST00000542293 FBXL21Q9UKT6 434 aa18.14■□□□□ 0.49
PAAF1-211ENST00000542293 CLASP2O75122 1294 aaKnown RBP18.13■□□□□ 0.49
PAAF1-211ENST00000542293 LAG3P18627 525 aa18.13■□□□□ 0.49
PAAF1-211ENST00000542293 TCF7P36402 384 aaPredicted RBP18.13■□□□□ 0.49
PAAF1-211ENST00000542293 TMEM266Q2M3C6 531 aa18.13■□□□□ 0.49
PAAF1-211ENST00000542293 MIER1Q8N108 512 aa18.13■□□□□ 0.49
PAAF1-211ENST00000542293 SUMF1Q8NBK3 374 aa18.13■□□□□ 0.49
PAAF1-211ENST00000542293 PUF60Q9UHX1 559 aaKnown RBP18.13■□□□□ 0.49
PAAF1-211ENST00000542293 PCDHA1Q9Y5I3 950 aa18.13■□□□□ 0.49
PAAF1-211ENST00000542293 FIBPO43427 364 aa18.12■□□□□ 0.49
PAAF1-211ENST00000542293 SP9P0CG40 484 aa18.12■□□□□ 0.49
PAAF1-211ENST00000542293 IGBP1P78318 339 aa18.12■□□□□ 0.49
PAAF1-211ENST00000542293 ZC3H14Q6PJT7 736 aaKnown RBP18.12■□□□□ 0.49
PAAF1-211ENST00000542293 TMC7Q7Z402 723 aa18.12■□□□□ 0.49
PAAF1-211ENST00000542293 TBC1D10CQ8IV04 446 aa18.12■□□□□ 0.49
PAAF1-211ENST00000542293 SAMD3Q8N6K7 520 aa18.12■□□□□ 0.49
PAAF1-211ENST00000542293 ATRXP46100 2492 aa18.12■□□□□ 0.49
PAAF1-211ENST00000542293 KRBA1A5PL33 1030 aa18.11■□□□□ 0.49
PAAF1-211ENST00000542293 C2orf71A6NGG8 1288 aa18.11■□□□□ 0.49
PAAF1-211ENST00000542293 GCOM1H8Y6P7 765 aaPredicted RBP18.11■□□□□ 0.49
PAAF1-211ENST00000542293 NARSO43776 548 aaKnown RBP18.11■□□□□ 0.49
PAAF1-211ENST00000542293 PARP1P09874 1014 aaKnown RBP18.11■□□□□ 0.49
PAAF1-211ENST00000542293 POLR2MP0CAP2 368 aa18.11■□□□□ 0.49
PAAF1-211ENST00000542293 PDE4AP27815 886 aa18.11■□□□□ 0.49
PAAF1-211ENST00000542293 PBX3P40426 434 aa18.11■□□□□ 0.49
PAAF1-211ENST00000542293 COL9A2Q14055 689 aaPredicted RBP18.11■□□□□ 0.49
PAAF1-211ENST00000542293 ATAT1Q5SQI0 421 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms