RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 RSPH3Q86UC2 560 aa22.65■■□□□ 1.22
DDX11-220ENST00000542244 CRIPAKQ8N1N5 446 aa22.65■■□□□ 1.22
DDX11-220ENST00000542244 FIBCD1Q8N539 461 aa22.65■■□□□ 1.22
DDX11-220ENST00000542244 ZNF689Q96CS4 500 aaPredicted RBP22.65■■□□□ 1.22
DDX11-220ENST00000542244 TMX1Q9H3N1 280 aa22.65■■□□□ 1.22
DDX11-220ENST00000542244 PCDHA2Q9Y5H9 948 aa22.65■■□□□ 1.22
DDX11-220ENST00000542244 POTEB3A0JP26 581 aa22.64■■□□□ 1.21
DDX11-220ENST00000542244 ZBTB42B2RXF5 422 aa22.64■■□□□ 1.21
DDX11-220ENST00000542244 H3BQ06 376 aaPredicted RBP22.64■■□□□ 1.21
DDX11-220ENST00000542244 IL9P15248 144 aa22.64■■□□□ 1.21
DDX11-220ENST00000542244 CTNNB1P35222 781 aa22.64■■□□□ 1.21
DDX11-220ENST00000542244 ZNF76P36508 570 aa22.64■■□□□ 1.21
DDX11-220ENST00000542244 NTRK3Q16288 839 aa22.64■■□□□ 1.21
DDX11-220ENST00000542244 POTEBQ6S5H4 581 aa22.64■■□□□ 1.21
DDX11-220ENST00000542244 NCOA5Q9HCD5 579 aaKnown RBP22.64■■□□□ 1.21
DDX11-220ENST00000542244 PADI3Q9ULW8 664 aa22.64■■□□□ 1.21
DDX11-220ENST00000542244 TRPV2Q9Y5S1 764 aa22.64■■□□□ 1.21
DDX11-220ENST00000542244 ADGRA3Q8IWK6 1321 aa22.63■■□□□ 1.21
DDX11-220ENST00000542244 hCG_1984214I3L0E3 225 aa22.63■■□□□ 1.21
DDX11-220ENST00000542244 RPS6KB1P23443 525 aa22.63■■□□□ 1.21
DDX11-220ENST00000542244 KLRC1P26715 233 aa22.63■■□□□ 1.21
DDX11-220ENST00000542244 ZNF713Q8N859 430 aaPredicted RBP22.63■■□□□ 1.21
DDX11-220ENST00000542244 BANK1Q8NDB2 785 aa22.63■■□□□ 1.21
DDX11-220ENST00000542244 TMEM40Q8WWA1 233 aa22.63■■□□□ 1.21
DDX11-220ENST00000542244 SAMD11Q96NU1 681 aa22.63■■□□□ 1.21
DDX11-220ENST00000542244 PPP1R16BQ96T49 567 aa22.63■■□□□ 1.21
DDX11-220ENST00000542244 ZMYND12Q9H0C1 365 aa22.63■■□□□ 1.21
DDX11-220ENST00000542244 MGEA5O60502 916 aa22.62■■□□□ 1.21
DDX11-220ENST00000542244 DGKIO75912 1065 aa22.62■■□□□ 1.21
DDX11-220ENST00000542244 CYP3A4P08684 503 aa22.62■■□□□ 1.21
DDX11-220ENST00000542244 BMPR1AP36894 532 aa22.62■■□□□ 1.21
DDX11-220ENST00000542244 RCAN1P53805 252 aa22.62■■□□□ 1.21
DDX11-220ENST00000542244 FGD1P98174 961 aa22.62■■□□□ 1.21
DDX11-220ENST00000542244 LEXMQ3ZCV2 418 aa22.62■■□□□ 1.21
DDX11-220ENST00000542244 SWSAP1Q6NVH7 229 aa22.62■■□□□ 1.21
DDX11-220ENST00000542244 BLOC1S2Q6QNY1 142 aa22.62■■□□□ 1.21
DDX11-220ENST00000542244 NIPA1Q7RTP0 329 aa22.62■■□□□ 1.21
DDX11-220ENST00000542244 TRMT1LQ7Z2T5 733 aaKnown RBP22.62■■□□□ 1.21
DDX11-220ENST00000542244 LARP6Q9BRS8 491 aaKnown RBP22.62■■□□□ 1.21
DDX11-220ENST00000542244 AGXT2Q9BYV1 514 aa22.62■■□□□ 1.21
DDX11-220ENST00000542244 CELF4Q9BZC1 486 aaKnown RBP22.62■■□□□ 1.21
DDX11-220ENST00000542244 MRPL42Q9Y6G3 142 aaKnown RBP22.62■■□□□ 1.21
DDX11-220ENST00000542244 MYO7AQ13402 2215 aa22.62■■□□□ 1.21
DDX11-220ENST00000542244 NID2Q14112 1375 aa22.62■■□□□ 1.21
DDX11-220ENST00000542244 IGSF9BQ9UPX0 1349 aa22.61■■□□□ 1.21
DDX11-220ENST00000542244 SMIM35A0A1B0GVV1 85 aa22.61■■□□□ 1.21
DDX11-220ENST00000542244 BACH1O14867 736 aa22.61■■□□□ 1.21
DDX11-220ENST00000542244 PRPF3O43395 683 aaKnown RBP22.61■■□□□ 1.21
DDX11-220ENST00000542244 HMGB1P09429 215 aaKnown RBP22.61■■□□□ 1.21
DDX11-220ENST00000542244 IBSPP21815 317 aaPredicted RBP22.61■■□□□ 1.21
DDX11-220ENST00000542244 GTF2F1P35269 517 aaKnown RBP eCLIP22.61■■□□□ 1.21
DDX11-220ENST00000542244 TTC3P53804 2025 aa22.61■■□□□ 1.21
DDX11-220ENST00000542244 CCT2P78371 535 aaKnown RBP22.61■■□□□ 1.21
DDX11-220ENST00000542244 CAMK1Q14012 370 aa22.61■■□□□ 1.21
DDX11-220ENST00000542244 KIAA0319LQ8IZA0 1049 aa22.61■■□□□ 1.21
DDX11-220ENST00000542244 GJA10Q969M2 543 aa22.61■■□□□ 1.21
DDX11-220ENST00000542244 NOC2LQ9Y3T9 749 aaKnown RBP22.61■■□□□ 1.21
DDX11-220ENST00000542244 LOXHD1Q8IVV2 1947 aa22.61■■□□□ 1.21
DDX11-220ENST00000542244 ESYT2A0FGR8 921 aa22.6■■□□□ 1.21
DDX11-220ENST00000542244 C5orf67F2Z3F1 127 aa22.6■■□□□ 1.21
DDX11-220ENST00000542244 IPO5O00410 1097 aaKnown RBP22.6■■□□□ 1.21
DDX11-220ENST00000542244 DTNBO60941 627 aa22.6■■□□□ 1.21
DDX11-220ENST00000542244 DNAJB1P25685 340 aa22.6■■□□□ 1.21
DDX11-220ENST00000542244 BTG3Q14201 252 aaPredicted RBP22.6■■□□□ 1.21
DDX11-220ENST00000542244 PTPROQ16827 1216 aa22.6■■□□□ 1.21
DDX11-220ENST00000542244 PAN2Q504Q3 1202 aaKnown RBP22.6■■□□□ 1.21
DDX11-220ENST00000542244 IER5Q5VY09 327 aa22.6■■□□□ 1.21
DDX11-220ENST00000542244 NEK9Q8TD19 979 aa22.6■■□□□ 1.21
DDX11-220ENST00000542244 ATP8B4Q8TF62 1192 aa22.6■■□□□ 1.21
DDX11-220ENST00000542244 CLP1Q92989 425 aaKnown RBP22.6■■□□□ 1.21
DDX11-220ENST00000542244 LENG9Q96B70 501 aa22.6■■□□□ 1.21
DDX11-220ENST00000542244 ALG13Q9NP73 1137 aaKnown RBP22.6■■□□□ 1.21
DDX11-220ENST00000542244 C11orf16Q9NQ32 467 aa22.6■■□□□ 1.21
DDX11-220ENST00000542244 ZNF302Q9NR11 478 aa22.6■■□□□ 1.21
DDX11-220ENST00000542244 VPS54Q9P1Q0 977 aa22.6■■□□□ 1.21
DDX11-220ENST00000542244 GINS2Q9Y248 185 aa22.6■■□□□ 1.21
DDX11-220ENST00000542244 RALGAPA2Q2PPJ7 1873 aa22.6■■□□□ 1.21
DDX11-220ENST00000542244 PDIA3P30101 505 aaKnown RBP22.59■■□□□ 1.21
DDX11-220ENST00000542244 LTBRP36941 435 aa22.59■■□□□ 1.21
DDX11-220ENST00000542244 KRT76Q01546 638 aa22.59■■□□□ 1.21
DDX11-220ENST00000542244 DLX2Q07687 328 aaPredicted RBP22.59■■□□□ 1.21
DDX11-220ENST00000542244 TOB2Q14106 344 aaPredicted RBP22.59■■□□□ 1.21
DDX11-220ENST00000542244 COL19A1Q14993 1142 aa22.59■■□□□ 1.21
DDX11-220ENST00000542244 PTCRAQ6ISU1 281 aaPredicted RBP22.59■■□□□ 1.21
DDX11-220ENST00000542244 PDXDC2PQ6P474 469 aa22.59■■□□□ 1.21
DDX11-220ENST00000542244 ZNF577Q9BSK1 485 aa22.59■■□□□ 1.21
DDX11-220ENST00000542244 ERVK-5Q9HDB9 667 aa22.59■■□□□ 1.21
DDX11-220ENST00000542244 HCSTQ9UBK5 93 aa22.59■■□□□ 1.21
DDX11-220ENST00000542244 FAM86C2PA6NEL3 165 aa22.58■■□□□ 1.21
DDX11-220ENST00000542244 HBP1O60381 514 aa22.58■■□□□ 1.21
DDX11-220ENST00000542244 HYAL1Q12794 435 aa22.58■■□□□ 1.21
DDX11-220ENST00000542244 PRR16Q569H4 304 aa22.58■■□□□ 1.21
DDX11-220ENST00000542244 EP400NLQ6ZTU2 488 aa22.58■■□□□ 1.21
DDX11-220ENST00000542244 FAM178BQ8IXR5 827 aa22.58■■□□□ 1.21
DDX11-220ENST00000542244 REXO1Q8N1G1 1221 aaKnown RBP22.58■■□□□ 1.21
DDX11-220ENST00000542244 SLC26A6Q9BXS9 759 aa22.58■■□□□ 1.21
DDX11-220ENST00000542244 NSUN3Q9H649 340 aaKnown RBP22.58■■□□□ 1.21
DDX11-220ENST00000542244 C6orf50Q9HD87 102 aa22.58■■□□□ 1.21
DDX11-220ENST00000542244 KDM3AQ9Y4C1 1321 aa22.57■■□□□ 1.2
DDX11-220ENST00000542244 KIAA1671Q9BY89 1806 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms