RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 CD3EP07766 207 aa7.38□□□□□ -1.23
SUDS3-202ENST00000541280 DBHP09172 617 aa7.38□□□□□ -1.23
SUDS3-202ENST00000541280 HOXB7P09629 217 aa7.38□□□□□ -1.23
SUDS3-202ENST00000541280 NASPP49321 788 aaPredicted RBP7.38□□□□□ -1.23
SUDS3-202ENST00000541280 GRB10Q13322 594 aa7.38□□□□□ -1.23
SUDS3-202ENST00000541280 DALRD3Q5D0E6 543 aaKnown RBP7.38□□□□□ -1.23
SUDS3-202ENST00000541280 EEF1DP3Q658K8 133 aa7.38□□□□□ -1.23
SUDS3-202ENST00000541280 HEATR6Q6AI08 1181 aaKnown RBP7.38□□□□□ -1.23
SUDS3-202ENST00000541280 LILRA6Q6PI73 481 aa7.38□□□□□ -1.23
SUDS3-202ENST00000541280 PAQR3Q6TCH7 311 aa7.38□□□□□ -1.23
SUDS3-202ENST00000541280 JAMLQ86YT9 394 aa7.38□□□□□ -1.23
SUDS3-202ENST00000541280 ARHGEF39Q8N4T4 335 aa7.38□□□□□ -1.23
SUDS3-202ENST00000541280 ZDHHC15Q96MV8 337 aa7.38□□□□□ -1.23
SUDS3-202ENST00000541280 KCNC2Q96PR1 638 aa7.38□□□□□ -1.23
SUDS3-202ENST00000541280 MCMBPQ9BTE3 642 aa7.38□□□□□ -1.23
SUDS3-202ENST00000541280 BRIP1Q9BX63 1249 aa7.38□□□□□ -1.23
SUDS3-202ENST00000541280 MIS18AQ9NYP9 233 aa7.38□□□□□ -1.23
SUDS3-202ENST00000541280 SUSD2Q9UGT4 822 aa7.38□□□□□ -1.23
SUDS3-202ENST00000541280 LY75O60449 1722 aa7.38□□□□□ -1.23
SUDS3-202ENST00000541280 C4BP0C0L5 1744 aa7.38□□□□□ -1.23
SUDS3-202ENST00000541280 A0A0G2JLW4 131 aa7.37□□□□□ -1.23
SUDS3-202ENST00000541280 NPHP1O15259 732 aa7.37□□□□□ -1.23
SUDS3-202ENST00000541280 CAMTA2O94983 1202 aa7.37□□□□□ -1.23
SUDS3-202ENST00000541280 EPHX1P07099 455 aa7.37□□□□□ -1.23
SUDS3-202ENST00000541280 DPEP1P16444 411 aa7.37□□□□□ -1.23
SUDS3-202ENST00000541280 ST5P78524 1137 aa7.37□□□□□ -1.23
SUDS3-202ENST00000541280 CAP1Q01518 475 aa7.37□□□□□ -1.23
SUDS3-202ENST00000541280 DDR1Q08345 913 aa7.37□□□□□ -1.23
SUDS3-202ENST00000541280 ZC3H14Q6PJT7 736 aaKnown RBP7.37□□□□□ -1.23
SUDS3-202ENST00000541280 NGEFQ8N5V2 710 aa7.37□□□□□ -1.23
SUDS3-202ENST00000541280 ZNF513Q8N8E2 541 aaPredicted RBP7.37□□□□□ -1.23
SUDS3-202ENST00000541280 PANK1Q8TE04 598 aa7.37□□□□□ -1.23
SUDS3-202ENST00000541280 KAT6BQ8WYB5 2073 aa7.36□□□□□ -1.23
SUDS3-202ENST00000541280 C5P01031 1676 aa7.36□□□□□ -1.23
SUDS3-202ENST00000541280 ZNF831Q5JPB2 1677 aa7.36□□□□□ -1.23
SUDS3-202ENST00000541280 A0A1W2PQ27 194 aa7.36□□□□□ -1.23
SUDS3-202ENST00000541280 A0A1W2PQ64 194 aa7.36□□□□□ -1.23
SUDS3-202ENST00000541280 A0A1W2PQC6 194 aa7.36□□□□□ -1.23
SUDS3-202ENST00000541280 A0A1W2PQD8 194 aa7.36□□□□□ -1.23
SUDS3-202ENST00000541280 PPM1BO75688 479 aa7.36□□□□□ -1.23
SUDS3-202ENST00000541280 IGFBP6P24592 240 aaPredicted RBP7.36□□□□□ -1.23
SUDS3-202ENST00000541280 L1CAMP32004 1257 aa7.36□□□□□ -1.23
SUDS3-202ENST00000541280 GNAI1P63096 354 aa7.36□□□□□ -1.23
SUDS3-202ENST00000541280 C9orf131Q5VYM1 1079 aa7.36□□□□□ -1.23
SUDS3-202ENST00000541280 TBC1D9BQ66K14 1250 aa7.36□□□□□ -1.23
SUDS3-202ENST00000541280 KIF6Q6ZMV9 814 aa7.36□□□□□ -1.23
SUDS3-202ENST00000541280 FAM129CQ86XR2 697 aa7.36□□□□□ -1.23
SUDS3-202ENST00000541280 CCDC146Q8IYE0 955 aa7.36□□□□□ -1.23
SUDS3-202ENST00000541280 RGS22Q8NE09 1264 aa7.36□□□□□ -1.23
SUDS3-202ENST00000541280 NYXQ9GZU5 481 aa7.36□□□□□ -1.23
SUDS3-202ENST00000541280 PARD6AQ9NPB6 346 aa7.36□□□□□ -1.23
SUDS3-202ENST00000541280 CGGBP1Q9UFW8 167 aaPredicted RBP7.36□□□□□ -1.23
SUDS3-202ENST00000541280 PCDHB10Q9UN67 800 aa7.36□□□□□ -1.23
SUDS3-202ENST00000541280 KCPQ6ZWJ8 1503 aa7.36□□□□□ -1.23
SUDS3-202ENST00000541280 TOGARAM1Q9Y4F4 1720 aa7.35□□□□□ -1.23
SUDS3-202ENST00000541280 CARMIL3Q8ND23 1372 aa7.35□□□□□ -1.23
SUDS3-202ENST00000541280 APAF1O14727 1248 aa7.35□□□□□ -1.23
SUDS3-202ENST00000541280 HOXA5P20719 270 aa7.35□□□□□ -1.23
SUDS3-202ENST00000541280 KCNA3P22001 575 aa7.35□□□□□ -1.23
SUDS3-202ENST00000541280 AFF3P51826 1226 aaKnown RBP7.35□□□□□ -1.23
SUDS3-202ENST00000541280 PPP2R5DQ14738 602 aa7.35□□□□□ -1.23
SUDS3-202ENST00000541280 HSP90AB3PQ58FF7 597 aa7.35□□□□□ -1.23
SUDS3-202ENST00000541280 SOGA3Q5TF21 947 aa7.35□□□□□ -1.23
SUDS3-202ENST00000541280 NBPF5PQ86XG9 351 aaPredicted RBP7.35□□□□□ -1.23
SUDS3-202ENST00000541280 TTLL6Q8N841 843 aa7.35□□□□□ -1.23
SUDS3-202ENST00000541280 CNBD1Q8NA66 436 aa7.35□□□□□ -1.23
SUDS3-202ENST00000541280 THUMPD2Q9BTF0 503 aaKnown RBP7.35□□□□□ -1.23
SUDS3-202ENST00000541280 IFT57Q9NWB7 429 aa7.35□□□□□ -1.23
SUDS3-202ENST00000541280 RRP7AQ9Y3A4 280 aaKnown RBP7.35□□□□□ -1.23
SUDS3-202ENST00000541280 C10orf71Q711Q0 1435 aa7.35□□□□□ -1.23
SUDS3-202ENST00000541280 MAP3K15Q6ZN16 1313 aa7.34□□□□□ -1.23
SUDS3-202ENST00000541280 PRAMEF22A3QJZ6 481 aa7.34□□□□□ -1.23
SUDS3-202ENST00000541280 KLRG2A4D1S0 409 aaPredicted RBP7.34□□□□□ -1.23
SUDS3-202ENST00000541280 TRIM13O60858 407 aa7.34□□□□□ -1.23
SUDS3-202ENST00000541280 ZNF143P52747 638 aaPredicted RBP7.34□□□□□ -1.23
SUDS3-202ENST00000541280 RBM10P98175 930 aaKnown RBP7.34□□□□□ -1.23
SUDS3-202ENST00000541280 PARP10Q53GL7 1025 aa7.34□□□□□ -1.23
SUDS3-202ENST00000541280 STYK1Q6J9G0 422 aa7.34□□□□□ -1.23
SUDS3-202ENST00000541280 CNKSR3Q6P9H4 555 aa7.34□□□□□ -1.23
SUDS3-202ENST00000541280 PPP1R42Q7Z4L9 355 aa7.34□□□□□ -1.23
SUDS3-202ENST00000541280 C2CD5Q86YS7 1000 aa7.34□□□□□ -1.23
SUDS3-202ENST00000541280 FAM169BQ8N8A8 192 aa7.34□□□□□ -1.23
SUDS3-202ENST00000541280 ADCY4Q8NFM4 1077 aa7.34□□□□□ -1.23
SUDS3-202ENST00000541280 MASTLQ96GX5 879 aa7.34□□□□□ -1.23
SUDS3-202ENST00000541280 C20orf173Q96LM9 149 aa7.34□□□□□ -1.23
SUDS3-202ENST00000541280 ACBD3Q9H3P7 528 aa7.34□□□□□ -1.23
SUDS3-202ENST00000541280 DDX21Q9NR30 783 aaKnown RBP eCLIP7.34□□□□□ -1.23
SUDS3-202ENST00000541280 DBF4Q9UBU7 674 aaPredicted RBP7.34□□□□□ -1.23
SUDS3-202ENST00000541280 NIP7Q9Y221 180 aaKnown RBP eCLIP7.34□□□□□ -1.23
SUDS3-202ENST00000541280 LAS1LQ9Y4W2 734 aaKnown RBP7.34□□□□□ -1.23
SUDS3-202ENST00000541280 BACE2Q9Y5Z0 518 aa7.34□□□□□ -1.23
SUDS3-202ENST00000541280 QSER1Q2KHR3 1735 aa7.34□□□□□ -1.23
SUDS3-202ENST00000541280 ADAMTS7Q9UKP4 1686 aa7.33□□□□□ -1.24
SUDS3-202ENST00000541280 ANKRD34BA5PLL1 514 aa7.33□□□□□ -1.24
SUDS3-202ENST00000541280 ZNF853P0CG23 659 aa7.33□□□□□ -1.24
SUDS3-202ENST00000541280 GLI4P10075 376 aa7.33□□□□□ -1.24
SUDS3-202ENST00000541280 EIF2S2P20042 333 aaKnown RBP7.33□□□□□ -1.24
SUDS3-202ENST00000541280 ALDH1B1P30837 517 aa7.33□□□□□ -1.24
SUDS3-202ENST00000541280 AMPD2Q01433 879 aa7.33□□□□□ -1.24
SUDS3-202ENST00000541280 PRR5LQ6MZQ0 368 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms