RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 PCYT2Q99447 389 aa30.7■■■□□ 2.51
CHFR-218ENST00000540963 PRRX2Q99811 253 aa30.7■■■□□ 2.51
CHFR-218ENST00000540963 MYL10Q9BUA6 226 aa30.7■■■□□ 2.51
CHFR-218ENST00000540963 FAM49AQ9H0Q0 323 aaPredicted RBP30.7■■■□□ 2.51
CHFR-218ENST00000540963 RNF216Q9NWF9 866 aaPredicted RBP30.7■■■□□ 2.51
CHFR-218ENST00000540963 CLEC1BQ9P126 229 aa30.7■■■□□ 2.51
CHFR-218ENST00000540963 FSD2A1L4K1 749 aa30.69■■■□□ 2.5
CHFR-218ENST00000540963 SCG2P13521 617 aa30.69■■■□□ 2.5
CHFR-218ENST00000540963 PAK2Q13177 524 aa30.69■■■□□ 2.5
CHFR-218ENST00000540963 PLPPR4Q7Z2D5 763 aa30.69■■■□□ 2.5
CHFR-218ENST00000540963 POF1BQ8WVV4 589 aa30.69■■■□□ 2.5
CHFR-218ENST00000540963 TMEM87BQ96K49 555 aa30.69■■■□□ 2.5
CHFR-218ENST00000540963 CELF4Q9BZC1 486 aaKnown RBP30.69■■■□□ 2.5
CHFR-218ENST00000540963 SLC9A2Q9UBY0 812 aa30.69■■■□□ 2.5
CHFR-218ENST00000540963 LOC730098B7Z3J9 87 aa30.68■■■□□ 2.5
CHFR-218ENST00000540963 PLEKHA8P1O95397 391 aa30.68■■■□□ 2.5
CHFR-218ENST00000540963 PDE4AP27815 886 aa30.68■■■□□ 2.5
CHFR-218ENST00000540963 UBE3AQ05086 875 aa30.68■■■□□ 2.5
CHFR-218ENST00000540963 CBX2Q14781 532 aaPredicted RBP30.68■■■□□ 2.5
CHFR-218ENST00000540963 PCDHA6Q9UN73 950 aa30.68■■■□□ 2.5
CHFR-218ENST00000540963 PCDHA8Q9Y5H6 950 aa30.68■■■□□ 2.5
CHFR-218ENST00000540963 NFASCO94856 1347 aa30.68■■■□□ 2.5
CHFR-218ENST00000540963 PLXNA4Q9HCM2 1894 aa30.67■■■□□ 2.5
CHFR-218ENST00000540963 SMIM35A0A1B0GVV1 85 aa30.67■■■□□ 2.5
CHFR-218ENST00000540963 ADGRD2Q7Z7M1 963 aa30.67■■■□□ 2.5
CHFR-218ENST00000540963 TRPC6Q9Y210 931 aa30.67■■■□□ 2.5
CHFR-218ENST00000540963 CCDC69A6NI79 296 aa30.66■■■□□ 2.5
CHFR-218ENST00000540963 MCM5P33992 734 aa30.66■■■□□ 2.5
CHFR-218ENST00000540963 LIFRP42702 1097 aa30.66■■■□□ 2.5
CHFR-218ENST00000540963 SLC26A2P50443 739 aa30.66■■■□□ 2.5
CHFR-218ENST00000540963 TRIM67Q6ZTA4 783 aa30.66■■■□□ 2.5
CHFR-218ENST00000540963 KCNH7Q9NS40 1196 aa30.66■■■□□ 2.5
CHFR-218ENST00000540963 PKD2L1Q9P0L9 805 aa30.66■■■□□ 2.5
CHFR-218ENST00000540963 LRFN2Q9ULH4 789 aa30.66■■■□□ 2.5
CHFR-218ENST00000540963 FNDC1Q4ZHG4 1894 aaPredicted RBP30.65■■■□□ 2.5
CHFR-218ENST00000540963 PRC1O43663 620 aa30.65■■■□□ 2.5
CHFR-218ENST00000540963 CSPG5O95196 566 aa30.65■■■□□ 2.5
CHFR-218ENST00000540963 NRIP1P48552 1158 aa30.65■■■□□ 2.5
CHFR-218ENST00000540963 PLCB4Q15147 1175 aa30.65■■■□□ 2.5
CHFR-218ENST00000540963 UBE2SQ16763 222 aa30.65■■■□□ 2.5
CHFR-218ENST00000540963 PAN2Q504Q3 1202 aaKnown RBP30.65■■■□□ 2.5
CHFR-218ENST00000540963 NFXL1Q6ZNB6 911 aa30.65■■■□□ 2.5
CHFR-218ENST00000540963 MXRA8Q9BRK3 442 aa30.65■■■□□ 2.5
CHFR-218ENST00000540963 SDF4Q9BRK5 362 aa30.65■■■□□ 2.5
CHFR-218ENST00000540963 SH2B2O14492 632 aaPredicted RBP30.64■■■□□ 2.5
CHFR-218ENST00000540963 SARSP49591 514 aaKnown RBP30.64■■■□□ 2.5
CHFR-218ENST00000540963 STAT5BP51692 787 aa30.64■■■□□ 2.5
CHFR-218ENST00000540963 KRT76Q01546 638 aa30.64■■■□□ 2.5
CHFR-218ENST00000540963 ZBTB10Q96DT7 871 aa30.64■■■□□ 2.5
CHFR-218ENST00000540963 AAASQ9NRG9 546 aa30.64■■■□□ 2.5
CHFR-218ENST00000540963 PCDHB12Q9Y5F1 795 aa30.64■■■□□ 2.5
CHFR-218ENST00000540963 RBM8AQ9Y5S9 174 aaKnown RBP30.64■■■□□ 2.5
CHFR-218ENST00000540963 TMEM221A6NGB7 291 aa30.63■■■□□ 2.49
CHFR-218ENST00000540963 M0R296 226 aa30.63■■■□□ 2.49
CHFR-218ENST00000540963 GLP2RO95838 553 aa30.63■■■□□ 2.49
CHFR-218ENST00000540963 ACTR2P61160 394 aa30.63■■■□□ 2.49
CHFR-218ENST00000540963 ODR4Q5SWX8 454 aa30.63■■■□□ 2.49
CHFR-218ENST00000540963 PDE12Q6L8Q7 609 aaKnown RBP30.63■■■□□ 2.49
CHFR-218ENST00000540963 CDCA3Q99618 268 aaPredicted RBP30.63■■■□□ 2.49
CHFR-218ENST00000540963 PHF7Q9BWX1 381 aaPredicted RBP30.63■■■□□ 2.49
CHFR-218ENST00000540963 TMX1Q9H3N1 280 aa30.63■■■□□ 2.49
CHFR-218ENST00000540963 ATG7O95352 703 aa30.62■■■□□ 2.49
CHFR-218ENST00000540963 ATF7P17544 494 aaPredicted RBP30.62■■■□□ 2.49
CHFR-218ENST00000540963 PTPN5P54829 565 aa30.62■■■□□ 2.49
CHFR-218ENST00000540963 ZXDAP98168 799 aa30.62■■■□□ 2.49
CHFR-218ENST00000540963 TMEM62Q0P6H9 643 aa30.62■■■□□ 2.49
CHFR-218ENST00000540963 PBXIP1Q96AQ6 731 aa30.62■■■□□ 2.49
CHFR-218ENST00000540963 TLE6Q9H808 572 aa30.62■■■□□ 2.49
CHFR-218ENST00000540963 C1orf112Q9NSG2 853 aa30.62■■■□□ 2.49
CHFR-218ENST00000540963 USP15Q9Y4E8 981 aaPredicted RBP30.62■■■□□ 2.49
CHFR-218ENST00000540963 PCDHB7Q9Y5E2 793 aa30.62■■■□□ 2.49
CHFR-218ENST00000540963 MTHFD1LQ6UB35 978 aa30.61■■■□□ 2.49
CHFR-218ENST00000540963 CMTR1Q8N1G2 835 aaKnown RBP30.61■■■□□ 2.49
CHFR-218ENST00000540963 FOSP01100 380 aaPredicted RBP30.6■■■□□ 2.49
CHFR-218ENST00000540963 TMTC3Q6ZXV5 915 aa30.6■■■□□ 2.49
CHFR-218ENST00000540963 RBM23Q86U06 439 aaKnown RBP30.6■■■□□ 2.49
CHFR-218ENST00000540963 SUGP1Q8IWZ8 645 aaKnown RBP30.6■■■□□ 2.49
CHFR-218ENST00000540963 ATP8B4Q8TF62 1192 aa30.6■■■□□ 2.49
CHFR-218ENST00000540963 TRAPPC12Q8WVT3 735 aa30.6■■■□□ 2.49
CHFR-218ENST00000540963 ERVK-5Q9HDB9 667 aa30.6■■■□□ 2.49
CHFR-218ENST00000540963 TLR9Q9NR96 1032 aa30.6■■■□□ 2.49
CHFR-218ENST00000540963 BARX2Q9UMQ3 279 aaPredicted RBP30.6■■■□□ 2.49
CHFR-218ENST00000540963 SLC12A7Q9Y666 1083 aa30.6■■■□□ 2.49
CHFR-218ENST00000540963 IGKV6D-21A0A0A0MT36 114 aa30.59■■■□□ 2.49
CHFR-218ENST00000540963 FANCBQ8NB91 859 aa30.59■■■□□ 2.49
CHFR-218ENST00000540963 PRSS33Q8NF86 280 aa30.59■■■□□ 2.49
CHFR-218ENST00000540963 RGS18Q9NS28 235 aa30.59■■■□□ 2.49
CHFR-218ENST00000540963 COL1A2P08123 1366 aa30.58■■■□□ 2.49
CHFR-218ENST00000540963 HBP1O60381 514 aa30.58■■■□□ 2.49
CHFR-218ENST00000540963 GATMP50440 423 aa30.58■■■□□ 2.49
CHFR-218ENST00000540963 NFX1Q12986 1120 aaKnown RBP30.58■■■□□ 2.49
CHFR-218ENST00000540963 CEP55Q53EZ4 464 aa30.58■■■□□ 2.49
CHFR-218ENST00000540963 SLC24A5Q71RS6 500 aa30.58■■■□□ 2.49
CHFR-218ENST00000540963 HEATR3Q7Z4Q2 680 aa30.58■■■□□ 2.49
CHFR-218ENST00000540963 MICAL1Q8TDZ2 1067 aa30.58■■■□□ 2.49
CHFR-218ENST00000540963 SUSD6Q92537 303 aa30.58■■■□□ 2.49
CHFR-218ENST00000540963 EVPLQ92817 2033 aa30.57■■■□□ 2.49
CHFR-218ENST00000540963 KMT2EQ8IZD2 1858 aa30.57■■■□□ 2.48
CHFR-218ENST00000540963 RPS6KA5O75582 802 aa30.57■■■□□ 2.48
CHFR-218ENST00000540963 RXRAP19793 462 aa30.57■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms