RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 MTMR7Q9Y216 660 aa5.51□□□□□ -1.53
SNHG1-214ENST00000540865 WDR87Q6ZQQ6 2873 aa5.51□□□□□ -1.53
SNHG1-214ENST00000540865 EPG5Q9HCE0 2579 aa5.51□□□□□ -1.53
SNHG1-214ENST00000540865 DCHS1Q96JQ0 3298 aa5.5□□□□□ -1.53
SNHG1-214ENST00000540865 LINC01553A4QN01 128 aa5.5□□□□□ -1.53
SNHG1-214ENST00000540865 F5H6K3 240 aa5.5□□□□□ -1.53
SNHG1-214ENST00000540865 H3BQ06 376 aaPredicted RBP5.5□□□□□ -1.53
SNHG1-214ENST00000540865 NCK2O43639 380 aa5.5□□□□□ -1.53
SNHG1-214ENST00000540865 KPNA6O60684 536 aa5.5□□□□□ -1.53
SNHG1-214ENST00000540865 ICMTO60725 284 aa5.5□□□□□ -1.53
SNHG1-214ENST00000540865 EFCAB14O75071 495 aa5.5□□□□□ -1.53
SNHG1-214ENST00000540865 PARNO95453 639 aaKnown RBP5.5□□□□□ -1.53
SNHG1-214ENST00000540865 NDUFB10O96000 172 aa5.5□□□□□ -1.53
SNHG1-214ENST00000540865 MX2P20592 715 aa5.5□□□□□ -1.53
SNHG1-214ENST00000540865 EIF1AXP47813 144 aaKnown RBP5.5□□□□□ -1.53
SNHG1-214ENST00000540865 CPT1AP50416 773 aa5.5□□□□□ -1.53
SNHG1-214ENST00000540865 PURAQ00577 322 aaKnown RBP5.5□□□□□ -1.53
SNHG1-214ENST00000540865 KLRC3Q07444 240 aa5.5□□□□□ -1.53
SNHG1-214ENST00000540865 SLFN5Q08AF3 891 aa5.5□□□□□ -1.53
SNHG1-214ENST00000540865 KCNA1Q09470 495 aa5.5□□□□□ -1.53
SNHG1-214ENST00000540865 TCF15Q12870 199 aa5.5□□□□□ -1.53
SNHG1-214ENST00000540865 OS9Q13438 667 aaPredicted RBP5.5□□□□□ -1.53
SNHG1-214ENST00000540865 TTF1Q15361 905 aaPredicted RBP5.5□□□□□ -1.53
SNHG1-214ENST00000540865 ECM1Q16610 540 aa5.5□□□□□ -1.53
SNHG1-214ENST00000540865 TIGD5Q53EQ6 642 aa5.5□□□□□ -1.53
SNHG1-214ENST00000540865 SLC9C2Q5TAH2 1124 aa5.5□□□□□ -1.53
SNHG1-214ENST00000540865 C12orf60Q5U649 245 aa5.5□□□□□ -1.53
SNHG1-214ENST00000540865 TAPT1Q6NXT6 567 aa5.5□□□□□ -1.53
SNHG1-214ENST00000540865 NFRKBQ6P4R8 1299 aa5.5□□□□□ -1.53
SNHG1-214ENST00000540865 CNKSR3Q6P9H4 555 aa5.5□□□□□ -1.53
SNHG1-214ENST00000540865 C16orf86Q6ZW13 317 aa5.5□□□□□ -1.53
SNHG1-214ENST00000540865 ERMP1Q7Z2K6 904 aa5.5□□□□□ -1.53
SNHG1-214ENST00000540865 AMOTL1Q8IY63 956 aa5.5□□□□□ -1.53
SNHG1-214ENST00000540865 LCORLQ8N3X6 602 aa5.5□□□□□ -1.53
SNHG1-214ENST00000540865 BEND7Q8N7W2 519 aaPredicted RBP5.5□□□□□ -1.53
SNHG1-214ENST00000540865 NEDD1Q8NHV4 660 aa5.5□□□□□ -1.53
SNHG1-214ENST00000540865 GPR152Q8TDT2 470 aa5.5□□□□□ -1.53
SNHG1-214ENST00000540865 AFAP1L1Q8TED9 768 aa5.5□□□□□ -1.53
SNHG1-214ENST00000540865 SDR42E1Q8WUS8 393 aa5.5□□□□□ -1.53
SNHG1-214ENST00000540865 EDAQ92838 391 aa5.5□□□□□ -1.53
SNHG1-214ENST00000540865 MRPL38Q96DV4 380 aaKnown RBP5.5□□□□□ -1.53
SNHG1-214ENST00000540865 NUP88Q99567 741 aaPredicted RBP5.5□□□□□ -1.53
SNHG1-214ENST00000540865 POP1Q99575 1024 aaKnown RBP5.5□□□□□ -1.53
SNHG1-214ENST00000540865 SLC30A3Q99726 388 aa5.5□□□□□ -1.53
SNHG1-214ENST00000540865 MTG1Q9BT17 334 aaPredicted RBP5.5□□□□□ -1.53
SNHG1-214ENST00000540865 ACAD9Q9H845 621 aa5.5□□□□□ -1.53
SNHG1-214ENST00000540865 RAVER2Q9HCJ3 691 aaKnown RBP5.5□□□□□ -1.53
SNHG1-214ENST00000540865 VTA1Q9NP79 307 aa5.5□□□□□ -1.53
SNHG1-214ENST00000540865 PDGFCQ9NRA1 345 aa5.5□□□□□ -1.53
SNHG1-214ENST00000540865 ATP8A2Q9NTI2 1148 aa5.5□□□□□ -1.53
SNHG1-214ENST00000540865 TLR7Q9NYK1 1049 aaKnown RBP5.5□□□□□ -1.53
SNHG1-214ENST00000540865 MARK1Q9P0L2 795 aa5.5□□□□□ -1.53
SNHG1-214ENST00000540865 NYAP2Q9P242 653 aa5.5□□□□□ -1.53
SNHG1-214ENST00000540865 FEM1BQ9UK73 627 aa5.5□□□□□ -1.53
SNHG1-214ENST00000540865 MTUS1Q9ULD2 1270 aa5.5□□□□□ -1.53
SNHG1-214ENST00000540865 NOP58Q9Y2X3 529 aaKnown RBP5.5□□□□□ -1.53
SNHG1-214ENST00000540865 ZFHX4Q86UP3 3567 aa5.49□□□□□ -1.53
SNHG1-214ENST00000540865 ABHD14A-ACY1A0A1B0GW23 586 aa5.49□□□□□ -1.53
SNHG1-214ENST00000540865 TCRBV5S4A2TA0A5A2 114 aa5.49□□□□□ -1.53
SNHG1-214ENST00000540865 TMEM221A6NGB7 291 aa5.49□□□□□ -1.53
SNHG1-214ENST00000540865 SOWAHDA6NJG2 315 aa5.49□□□□□ -1.53
SNHG1-214ENST00000540865 M0R296 226 aa5.49□□□□□ -1.53
SNHG1-214ENST00000540865 SURF6O75683 361 aaKnown RBP5.49□□□□□ -1.53
SNHG1-214ENST00000540865 CXCL10P02778 98 aa5.49□□□□□ -1.53
SNHG1-214ENST00000540865 BMP4P12644 408 aa5.49□□□□□ -1.53
SNHG1-214ENST00000540865 PDE6AP16499 860 aa5.49□□□□□ -1.53
SNHG1-214ENST00000540865 PTGS1P23219 599 aa5.49□□□□□ -1.53
SNHG1-214ENST00000540865 ARSDP51689 593 aa5.49□□□□□ -1.53
SNHG1-214ENST00000540865 DEFB103AP81534 67 aa5.49□□□□□ -1.53
SNHG1-214ENST00000540865 AAMPQ13685 434 aa5.49□□□□□ -1.53
SNHG1-214ENST00000540865 SMAD2Q15796 467 aaKnown RBP5.49□□□□□ -1.53
SNHG1-214ENST00000540865 TKFCQ3LXA3 575 aa5.49□□□□□ -1.53
SNHG1-214ENST00000540865 DUSP28Q4G0W2 176 aa5.49□□□□□ -1.53
SNHG1-214ENST00000540865 BRDTQ58F21 947 aaPredicted RBP5.49□□□□□ -1.53
SNHG1-214ENST00000540865 FAM47CQ5HY64 1035 aa5.49□□□□□ -1.53
SNHG1-214ENST00000540865 KIAA1211Q6ZU35 1233 aa5.49□□□□□ -1.53
SNHG1-214ENST00000540865 TMCO2Q7Z6W1 182 aaPredicted RBP5.49□□□□□ -1.53
SNHG1-214ENST00000540865 GLYCTKQ8IVS8 523 aa5.49□□□□□ -1.53
SNHG1-214ENST00000540865 SUGP1Q8IWZ8 645 aaKnown RBP5.49□□□□□ -1.53
SNHG1-214ENST00000540865 FBXO16Q8IX29 292 aaPredicted RBP5.49□□□□□ -1.53
SNHG1-214ENST00000540865 CMTR1Q8N1G2 835 aaKnown RBP5.49□□□□□ -1.53
SNHG1-214ENST00000540865 CAGE1Q8TC20 777 aa5.49□□□□□ -1.53
SNHG1-214ENST00000540865 MORC4Q8TE76 937 aa5.49□□□□□ -1.53
SNHG1-214ENST00000540865 SSH3Q8TE77 659 aa5.49□□□□□ -1.53
SNHG1-214ENST00000540865 EAF2Q96CJ1 260 aaPredicted RBP5.49□□□□□ -1.53
SNHG1-214ENST00000540865 SAMD11Q96NU1 681 aa5.49□□□□□ -1.53
SNHG1-214ENST00000540865 CRBNQ96SW2 442 aa5.49□□□□□ -1.53
SNHG1-214ENST00000540865 CCDC8Q9H0W5 538 aaPredicted RBP5.49□□□□□ -1.53
SNHG1-214ENST00000540865 A1CFQ9NQ94 594 aaKnown RBP5.49□□□□□ -1.53
SNHG1-214ENST00000540865 MUTYHQ9UIF7 546 aa5.49□□□□□ -1.53
SNHG1-214ENST00000540865 SYNPO2Q9UMS6 1093 aa5.49□□□□□ -1.53
SNHG1-214ENST00000540865 INSL6Q9Y581 213 aa5.49□□□□□ -1.53
SNHG1-214ENST00000540865 GVINP1Q7Z2Y8 2422 aa5.49□□□□□ -1.53
SNHG1-214ENST00000540865 ZNF532Q9HCE3 1301 aa5.48□□□□□ -1.53
SNHG1-214ENST00000540865 FOCADQ5VW36 1801 aa5.48□□□□□ -1.53
SNHG1-214ENST00000540865 DNAH14Q0VDD8 3507 aa5.48□□□□□ -1.53
SNHG1-214ENST00000540865 FAM186AA6NE01 2351 aa5.48□□□□□ -1.53
SNHG1-214ENST00000540865 LOC102724159A0A0B4J2E5 919 aa5.48□□□□□ -1.53
SNHG1-214ENST00000540865 RBM47A0AV96 593 aaKnown RBP5.48□□□□□ -1.53
SNHG1-214ENST00000540865 PROB1E7EW31 1015 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms