RNA–Protein interactions for RNA: ENST00000540848.5

LMO3-224, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LMO3, Length 1,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-224ENST00000540848 FXR1P51114 621 aaKnown RBP eCLIP11.24□□□□□ -0.61
LMO3-224ENST00000540848 TUBB4BP68371 445 aa11.24□□□□□ -0.61
LMO3-224ENST00000540848 CDK17Q00537 523 aa11.24□□□□□ -0.61
LMO3-224ENST00000540848 SPIRE1Q08AE8 756 aa11.24□□□□□ -0.61
LMO3-224ENST00000540848 TBC1D8BQ0IIM8 1120 aa11.24□□□□□ -0.61
LMO3-224ENST00000540848 COASYQ13057 564 aa11.24□□□□□ -0.61
LMO3-224ENST00000540848 MAN2A1Q16706 1144 aa11.24□□□□□ -0.61
LMO3-224ENST00000540848 FAM83BQ5T0W9 1011 aa11.24□□□□□ -0.61
LMO3-224ENST00000540848 TOGARAM2Q6ZUX3 1019 aa11.24□□□□□ -0.61
LMO3-224ENST00000540848 PDCL2Q8N4E4 241 aa11.24□□□□□ -0.61
LMO3-224ENST00000540848 LENG9Q96B70 501 aa11.24□□□□□ -0.61
LMO3-224ENST00000540848 NOC4LQ9BVI4 516 aaKnown RBP11.24□□□□□ -0.61
LMO3-224ENST00000540848 EDEM3Q9BZQ6 932 aa11.24□□□□□ -0.61
LMO3-224ENST00000540848 MTFR1LQ9H019 292 aa11.24□□□□□ -0.61
LMO3-224ENST00000540848 SEMA6BQ9H3T3 888 aa11.24□□□□□ -0.61
LMO3-224ENST00000540848 SLC39A2Q9NP94 309 aa11.24□□□□□ -0.61
LMO3-224ENST00000540848 ZNHIT6Q9NWK9 470 aaKnown RBP11.24□□□□□ -0.61
LMO3-224ENST00000540848 CGNQ9P2M7 1197 aaKnown RBP11.24□□□□□ -0.61
LMO3-224ENST00000540848 PGAP2Q9UHJ9 254 aa11.24□□□□□ -0.61
LMO3-224ENST00000540848 KIAA1024Q9UPX6 916 aa11.24□□□□□ -0.61
LMO3-224ENST00000540848 LOXHD1Q8IVV2 1947 aa11.24□□□□□ -0.61
LMO3-224ENST00000540848 OPLAHO14841 1288 aa11.24□□□□□ -0.61
LMO3-224ENST00000540848 WDR46O15213 610 aaKnown RBP11.24□□□□□ -0.61
LMO3-224ENST00000540848 WFS1O76024 890 aa11.24□□□□□ -0.61
LMO3-224ENST00000540848 ECE1P42892 770 aa11.24□□□□□ -0.61
LMO3-224ENST00000540848 ZBED6P86452 979 aa11.24□□□□□ -0.61
LMO3-224ENST00000540848 FKBP3Q00688 224 aaKnown RBP11.24□□□□□ -0.61
LMO3-224ENST00000540848 GHRHRQ02643 423 aa11.24□□□□□ -0.61
LMO3-224ENST00000540848 GOLGA8FQ08AF8 430 aa11.24□□□□□ -0.61
LMO3-224ENST00000540848 GOLGA8DPQ0D2H9 430 aa11.24□□□□□ -0.61
LMO3-224ENST00000540848 MEA1Q16626 185 aa11.24□□□□□ -0.61
LMO3-224ENST00000540848 KIF4BQ2VIQ3 1234 aa11.24□□□□□ -0.61
LMO3-224ENST00000540848 ZNF662Q6ZS27 426 aa11.24□□□□□ -0.61
LMO3-224ENST00000540848 DYMQ7RTS9 669 aa11.24□□□□□ -0.61
LMO3-224ENST00000540848 KRT26Q7Z3Y9 468 aa11.24□□□□□ -0.61
LMO3-224ENST00000540848 KCNK18Q7Z418 384 aa11.24□□□□□ -0.61
LMO3-224ENST00000540848 GPBP1Q86WP2 473 aa11.24□□□□□ -0.61
LMO3-224ENST00000540848 MCF2L2Q86YR7 1114 aa11.24□□□□□ -0.61
LMO3-224ENST00000540848 CREBRFQ8IUR6 639 aa11.24□□□□□ -0.61
LMO3-224ENST00000540848 CCDC170Q8IYT3 715 aa11.24□□□□□ -0.61
LMO3-224ENST00000540848 SYT2Q8N9I0 419 aaPredicted RBP11.24□□□□□ -0.61
LMO3-224ENST00000540848 ACER1Q8TDN7 264 aa11.24□□□□□ -0.61
LMO3-224ENST00000540848 CPLX3Q8WVH0 158 aa11.24□□□□□ -0.61
LMO3-224ENST00000540848 WDR11Q9BZH6 1224 aa11.24□□□□□ -0.61
LMO3-224ENST00000540848 TMEM39BQ9GZU3 492 aa11.24□□□□□ -0.61
LMO3-224ENST00000540848 TUFT1Q9NNX1 390 aa11.24□□□□□ -0.61
LMO3-224ENST00000540848 ATAD5Q96QE3 1844 aa11.23□□□□□ -0.61
LMO3-224ENST00000540848 SOWAHDA6NJG2 315 aa11.23□□□□□ -0.61
LMO3-224ENST00000540848 FAM86B1E9PN63 330 aa11.23□□□□□ -0.61
LMO3-224ENST00000540848 PES1O00541 588 aaKnown RBP11.23□□□□□ -0.61
LMO3-224ENST00000540848 CTNND1O60716 968 aaKnown RBP11.23□□□□□ -0.61
LMO3-224ENST00000540848 FAM86B2P0C5J1 330 aa11.23□□□□□ -0.61
LMO3-224ENST00000540848 CYP11B2P19099 503 aa11.23□□□□□ -0.61
LMO3-224ENST00000540848 TRIM21P19474 475 aaKnown RBP11.23□□□□□ -0.61
LMO3-224ENST00000540848 SLC12A3P55017 1021 aa11.23□□□□□ -0.61
LMO3-224ENST00000540848 MARSP56192 900 aaKnown RBP11.23□□□□□ -0.61
LMO3-224ENST00000540848 GNG11P61952 73 aa11.23□□□□□ -0.61
LMO3-224ENST00000540848 KRT83P78385 493 aa11.23□□□□□ -0.61
LMO3-224ENST00000540848 NCBP1Q09161 790 aaKnown RBP11.23□□□□□ -0.61
LMO3-224ENST00000540848 PPP2R5CQ13362 524 aa11.23□□□□□ -0.61
LMO3-224ENST00000540848 NNTQ13423 1086 aa11.23□□□□□ -0.61
LMO3-224ENST00000540848 ECM1Q16610 540 aa11.23□□□□□ -0.61
LMO3-224ENST00000540848 PTPN21Q16825 1174 aa11.23□□□□□ -0.61
LMO3-224ENST00000540848 EDRF1Q3B7T1 1238 aa11.23□□□□□ -0.61
LMO3-224ENST00000540848 VWA3BQ502W6 1294 aa11.23□□□□□ -0.61
LMO3-224ENST00000540848 NIPA1Q7RTP0 329 aa11.23□□□□□ -0.61
LMO3-224ENST00000540848 DEFB132Q7Z7B7 95 aa11.23□□□□□ -0.61
LMO3-224ENST00000540848 SPICE1Q8N0Z3 855 aa11.23□□□□□ -0.61
LMO3-224ENST00000540848 NEK9Q8TD19 979 aa11.23□□□□□ -0.61
LMO3-224ENST00000540848 TTYH3Q9C0H2 523 aa11.23□□□□□ -0.61
LMO3-224ENST00000540848 KIAA1683Q9H0B3 1180 aa11.23□□□□□ -0.61
LMO3-224ENST00000540848 KCND2Q9NZV8 630 aa11.23□□□□□ -0.61
LMO3-224ENST00000540848 CD2APQ9Y5K6 639 aa11.23□□□□□ -0.61
LMO3-224ENST00000540848 IGLV3-22A0A075B6J6 115 aa11.22□□□□□ -0.61
LMO3-224ENST00000540848 TTC26A0AVF1 554 aa11.22□□□□□ -0.61
LMO3-224ENST00000540848 B4DLN1 442 aa11.22□□□□□ -0.61
LMO3-224ENST00000540848 MSH4O15457 936 aa11.22□□□□□ -0.61
LMO3-224ENST00000540848 MED24O75448 989 aa11.22□□□□□ -0.61
LMO3-224ENST00000540848 IPO7O95373 1038 aaKnown RBP11.22□□□□□ -0.61
LMO3-224ENST00000540848 ICAM1P05362 532 aa11.22□□□□□ -0.61
LMO3-224ENST00000540848 KRT18P05783 430 aaKnown RBP11.22□□□□□ -0.61
LMO3-224ENST00000540848 GAP43P17677 238 aa11.22□□□□□ -0.61
LMO3-224ENST00000540848 CYLC1P35663 651 aaPredicted RBP11.22□□□□□ -0.61
LMO3-224ENST00000540848 USP14P54578 494 aa11.22□□□□□ -0.61
LMO3-224ENST00000540848 PPP2R3AQ06190 1150 aa11.22□□□□□ -0.61
LMO3-224ENST00000540848 ZCWPW2Q504Y3 356 aa11.22□□□□□ -0.61
LMO3-224ENST00000540848 ARHGAP29Q52LW3 1261 aa11.22□□□□□ -0.61
LMO3-224ENST00000540848 MIIPQ5JXC2 388 aa11.22□□□□□ -0.61
LMO3-224ENST00000540848 RAD9BQ6WBX8 426 aa11.22□□□□□ -0.61
LMO3-224ENST00000540848 LRRC55Q6ZSA7 311 aa11.22□□□□□ -0.61
LMO3-224ENST00000540848 CATSPER3Q86XQ3 398 aa11.22□□□□□ -0.61
LMO3-224ENST00000540848 ZC3H3Q8IXZ2 948 aaKnown RBP11.22□□□□□ -0.61
LMO3-224ENST00000540848 TXLNBQ8N3L3 684 aa11.22□□□□□ -0.61
LMO3-224ENST00000540848 PRPF38AQ8NAV1 312 aaKnown RBP11.22□□□□□ -0.61
LMO3-224ENST00000540848 TSC1Q92574 1164 aa11.22□□□□□ -0.61
LMO3-224ENST00000540848 SLC5A5Q92911 643 aa11.22□□□□□ -0.61
LMO3-224ENST00000540848 KIFC2Q96AC6 838 aa11.22□□□□□ -0.61
LMO3-224ENST00000540848 PDGFDQ9GZP0 370 aaPredicted RBP11.22□□□□□ -0.61
LMO3-224ENST00000540848 MAF1Q9H063 256 aa11.22□□□□□ -0.61
LMO3-224ENST00000540848 NUCKS1Q9H1E3 243 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms