RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 ECM1Q16610 540 aa13.89□□□□□ -0.19
SMAD3-204ENST00000540846 LY6KQ17RY6 165 aa13.89□□□□□ -0.19
SMAD3-204ENST00000540846 COBLL1Q53SF7 1204 aa13.89□□□□□ -0.19
SMAD3-204ENST00000540846 HAUS3Q68CZ6 603 aa13.89□□□□□ -0.19
SMAD3-204ENST00000540846 KCNK18Q7Z418 384 aa13.89□□□□□ -0.19
SMAD3-204ENST00000540846 TRPV1Q8NER1 839 aa13.89□□□□□ -0.19
SMAD3-204ENST00000540846 LRRC27Q9C0I9 530 aa13.89□□□□□ -0.19
SMAD3-204ENST00000540846 SAMSN1Q9NSI8 373 aaKnown RBP13.89□□□□□ -0.19
SMAD3-204ENST00000540846 EXOC1Q9NV70 894 aa13.89□□□□□ -0.19
SMAD3-204ENST00000540846 MYH9P35579 1960 aaKnown RBP13.89□□□□□ -0.19
SMAD3-204ENST00000540846 ARID2Q68CP9 1835 aa13.89□□□□□ -0.19
SMAD3-204ENST00000540846 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.88□□□□□ -0.19
SMAD3-204ENST00000540846 PVALEFA0A1B0GWK0 134 aa13.88□□□□□ -0.19
SMAD3-204ENST00000540846 MYMKA6NI61 221 aa13.88□□□□□ -0.19
SMAD3-204ENST00000540846 DDX39AO00148 427 aaKnown RBP13.88□□□□□ -0.19
SMAD3-204ENST00000540846 CYBAP13498 195 aa13.88□□□□□ -0.19
SMAD3-204ENST00000540846 PPP1R2P41236 205 aa13.88□□□□□ -0.19
SMAD3-204ENST00000540846 ADCYAP1R1P41586 468 aa13.88□□□□□ -0.19
SMAD3-204ENST00000540846 PRCPP42785 496 aa13.88□□□□□ -0.19
SMAD3-204ENST00000540846 TRIM32Q13049 653 aa13.88□□□□□ -0.19
SMAD3-204ENST00000540846 DHX8Q14562 1220 aaKnown RBP13.88□□□□□ -0.19
SMAD3-204ENST00000540846 PRAMEF19Q5SWL8 479 aa13.88□□□□□ -0.19
SMAD3-204ENST00000540846 KCNV1Q6PIU1 500 aa13.88□□□□□ -0.19
SMAD3-204ENST00000540846 ERMNQ8TAM6 284 aa13.88□□□□□ -0.19
SMAD3-204ENST00000540846 NELFBQ8WX92 580 aa13.88□□□□□ -0.19
SMAD3-204ENST00000540846 INTS13Q9NVM9 706 aa13.88□□□□□ -0.19
SMAD3-204ENST00000540846 SPATA31C1P0DKV0 1188 aa13.88□□□□□ -0.19
SMAD3-204ENST00000540846 HSPA8P11142 646 aaKnown RBP13.88□□□□□ -0.19
SMAD3-204ENST00000540846 ELNP15502 786 aa13.88□□□□□ -0.19
SMAD3-204ENST00000540846 HOXD10P28358 340 aa13.88□□□□□ -0.19
SMAD3-204ENST00000540846 STX17P56962 302 aa13.88□□□□□ -0.19
SMAD3-204ENST00000540846 KRT76Q01546 638 aa13.88□□□□□ -0.19
SMAD3-204ENST00000540846 ARHGAP1Q07960 439 aa13.88□□□□□ -0.19
SMAD3-204ENST00000540846 STIM1Q13586 685 aa13.88□□□□□ -0.19
SMAD3-204ENST00000540846 TTLL4Q14679 1199 aa13.88□□□□□ -0.19
SMAD3-204ENST00000540846 GJC2Q5T442 439 aaPredicted RBP13.88□□□□□ -0.19
SMAD3-204ENST00000540846 MAP3K21Q5TCX8 1036 aa13.88□□□□□ -0.19
SMAD3-204ENST00000540846 NCAPH2Q6IBW4 605 aa13.88□□□□□ -0.19
SMAD3-204ENST00000540846 ZNF746Q6NUN9 644 aaPredicted RBP13.88□□□□□ -0.19
SMAD3-204ENST00000540846 UNC13DQ70J99 1090 aa13.88□□□□□ -0.19
SMAD3-204ENST00000540846 FILIP1Q7Z7B0 1213 aa13.88□□□□□ -0.19
SMAD3-204ENST00000540846 VSTM4Q8IW00 320 aa13.88□□□□□ -0.19
SMAD3-204ENST00000540846 CACTINQ8WUQ7 758 aaKnown RBP13.88□□□□□ -0.19
SMAD3-204ENST00000540846 COPS5Q92905 334 aa13.88□□□□□ -0.19
SMAD3-204ENST00000540846 NAP1L5Q96NT1 182 aaPredicted RBP13.88□□□□□ -0.19
SMAD3-204ENST00000540846 HSD17B14Q9BPX1 270 aa13.88□□□□□ -0.19
SMAD3-204ENST00000540846 JPH1Q9HDC5 661 aaPredicted RBP13.88□□□□□ -0.19
SMAD3-204ENST00000540846 POTEB3A0JP26 581 aa13.87□□□□□ -0.19
SMAD3-204ENST00000540846 PSMA7O14818 248 aa13.87□□□□□ -0.19
SMAD3-204ENST00000540846 CHMP2AO43633 222 aa13.87□□□□□ -0.19
SMAD3-204ENST00000540846 MED24O75448 989 aa13.87□□□□□ -0.19
SMAD3-204ENST00000540846 ATG7O95352 703 aa13.87□□□□□ -0.19
SMAD3-204ENST00000540846 GGPS1O95749 300 aa13.87□□□□□ -0.19
SMAD3-204ENST00000540846 TXNP10599 105 aaKnown RBP13.87□□□□□ -0.19
SMAD3-204ENST00000540846 SMPD1P17405 629 aa13.87□□□□□ -0.19
SMAD3-204ENST00000540846 CDK11BP21127 795 aaKnown RBP13.87□□□□□ -0.19
SMAD3-204ENST00000540846 RPA1P27694 616 aa13.87□□□□□ -0.19
SMAD3-204ENST00000540846 PRMT2P55345 433 aa13.87□□□□□ -0.19
SMAD3-204ENST00000540846 NEDD9Q14511 834 aa13.87□□□□□ -0.19
SMAD3-204ENST00000540846 CELF3Q5SZQ8 465 aaKnown RBP13.87□□□□□ -0.19
SMAD3-204ENST00000540846 POTEBQ6S5H4 581 aa13.87□□□□□ -0.19
SMAD3-204ENST00000540846 METTL7BQ6UX53 244 aa13.87□□□□□ -0.19
SMAD3-204ENST00000540846 CYFIP1Q7L576 1253 aa13.87□□□□□ -0.19
SMAD3-204ENST00000540846 APTXQ7Z2E3 356 aaKnown RBP13.87□□□□□ -0.19
SMAD3-204ENST00000540846 TMC6Q7Z403 805 aa13.87□□□□□ -0.19
SMAD3-204ENST00000540846 CCDC150Q8NCX0 1101 aa13.87□□□□□ -0.19
SMAD3-204ENST00000540846 KIAA1524Q8TCG1 905 aa13.87□□□□□ -0.19
SMAD3-204ENST00000540846 PXYLP1Q8TE99 480 aa13.87□□□□□ -0.19
SMAD3-204ENST00000540846 DHTKD1Q96HY7 919 aaPredicted RBP13.87□□□□□ -0.19
SMAD3-204ENST00000540846 EIF2AK1Q9BQI3 630 aaKnown RBP13.87□□□□□ -0.19
SMAD3-204ENST00000540846 WRAP73Q9P2S5 460 aaPredicted RBP13.87□□□□□ -0.19
SMAD3-204ENST00000540846 SLC9A2Q9UBY0 812 aa13.87□□□□□ -0.19
SMAD3-204ENST00000540846 ZHX1Q9UKY1 873 aaPredicted RBP13.87□□□□□ -0.19
SMAD3-204ENST00000540846 PYCARDQ9ULZ3 195 aa13.87□□□□□ -0.19
SMAD3-204ENST00000540846 A0A1B0GTH6 734 aa13.86□□□□□ -0.19
SMAD3-204ENST00000540846 ADCY3O60266 1144 aa13.86□□□□□ -0.19
SMAD3-204ENST00000540846 ACTR2P61160 394 aa13.86□□□□□ -0.19
SMAD3-204ENST00000540846 SPAG1Q07617 926 aa13.86□□□□□ -0.19
SMAD3-204ENST00000540846 CACNB2Q08289 660 aaPredicted RBP13.86□□□□□ -0.19
SMAD3-204ENST00000540846 EHHADHQ08426 723 aa13.86□□□□□ -0.19
SMAD3-204ENST00000540846 LRMPQ12912 555 aa13.86□□□□□ -0.19
SMAD3-204ENST00000540846 EPHA7Q15375 998 aa13.86□□□□□ -0.19
SMAD3-204ENST00000540846 HSDL1Q3SXM5 330 aa13.86□□□□□ -0.19
SMAD3-204ENST00000540846 DUSP28Q4G0W2 176 aa13.86□□□□□ -0.19
SMAD3-204ENST00000540846 HSP90AA4PQ58FG1 418 aa13.86□□□□□ -0.19
SMAD3-204ENST00000540846 IQSEC1Q6DN90 963 aa13.86□□□□□ -0.19
SMAD3-204ENST00000540846 ABHD15Q6UXT9 468 aa13.86□□□□□ -0.19
SMAD3-204ENST00000540846 CATSPER3Q86XQ3 398 aa13.86□□□□□ -0.19
SMAD3-204ENST00000540846 LRRC8AQ8IWT6 810 aa13.86□□□□□ -0.19
SMAD3-204ENST00000540846 KCTD17Q8N5Z5 321 aa13.86□□□□□ -0.19
SMAD3-204ENST00000540846 RDM1Q8NG50 284 aa13.86□□□□□ -0.19
SMAD3-204ENST00000540846 EMID1Q96A84 441 aaPredicted RBP13.86□□□□□ -0.19
SMAD3-204ENST00000540846 POLR3CQ9BUI4 534 aaPredicted RBP13.86□□□□□ -0.19
SMAD3-204ENST00000540846 SPTLC3Q9NUV7 552 aa13.86□□□□□ -0.19
SMAD3-204ENST00000540846 RGL1Q9NZL6 768 aa13.86□□□□□ -0.19
SMAD3-204ENST00000540846 KIAA1024Q9UPX6 916 aa13.86□□□□□ -0.19
SMAD3-204ENST00000540846 GNEQ9Y223 722 aaKnown RBP13.86□□□□□ -0.19
SMAD3-204ENST00000540846 IGKV6D-21A0A0A0MT36 114 aa13.85□□□□□ -0.19
SMAD3-204ENST00000540846 GSTTP1A0A1W2PQM5 241 aa13.85□□□□□ -0.19
SMAD3-204ENST00000540846 WDR64B1ANS9 1081 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms