RNA–Protein interactions for RNA: ENST00000540574.5

PHC1-208, Transcript of polyhomeotic homolog 1, humanhuman

TSL 1 (best)

Gene PHC1, Length 3,869 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-208ENST00000540574 ZRANB2O95218 330 aaKnown RBP eCLIP10.79□□□□□ -0.68
PHC1-208ENST00000540574 FOSP01100 380 aaPredicted RBP10.79□□□□□ -0.68
PHC1-208ENST00000540574 IL1R1P14778 569 aa10.79□□□□□ -0.68
PHC1-208ENST00000540574 ADRA2BP18089 450 aa10.79□□□□□ -0.68
PHC1-208ENST00000540574 CARSP49589 748 aaKnown RBP10.79□□□□□ -0.68
PHC1-208ENST00000540574 PTK2Q05397 1052 aa10.79□□□□□ -0.68
PHC1-208ENST00000540574 HAS1Q92839 578 aa10.79□□□□□ -0.68
PHC1-208ENST00000540574 CCDC114Q96M63 670 aa10.79□□□□□ -0.68
PHC1-208ENST00000540574 CRAMP1Q96RY5 1269 aa10.79□□□□□ -0.68
PHC1-208ENST00000540574 RUSC1Q9BVN2 902 aa10.79□□□□□ -0.68
PHC1-208ENST00000540574 TEKT3Q9BXF9 490 aa10.79□□□□□ -0.68
PHC1-208ENST00000540574 CEP72Q9P209 647 aa10.79□□□□□ -0.68
PHC1-208ENST00000540574 L1RE1Q9UN81 338 aa10.79□□□□□ -0.68
PHC1-208ENST00000540574 NUP98P52948 1817 aa10.79□□□□□ -0.68
PHC1-208ENST00000540574 TMEM150BA6NC51 233 aa10.78□□□□□ -0.68
PHC1-208ENST00000540574 POLRMTO00411 1230 aaKnown RBP10.78□□□□□ -0.68
PHC1-208ENST00000540574 ATP8B1O43520 1251 aa10.78□□□□□ -0.68
PHC1-208ENST00000540574 MYBL2P10244 700 aa10.78□□□□□ -0.68
PHC1-208ENST00000540574 CYP2C19P33261 490 aa10.78□□□□□ -0.68
PHC1-208ENST00000540574 COG2Q14746 738 aa10.78□□□□□ -0.68
PHC1-208ENST00000540574 APOBEC3HQ6NTF7 200 aaKnown RBP10.78□□□□□ -0.68
PHC1-208ENST00000540574 TRAPPC11Q7Z392 1133 aa10.78□□□□□ -0.68
PHC1-208ENST00000540574 OR2W6PQ8NHA6 318 aa10.78□□□□□ -0.68
PHC1-208ENST00000540574 SCFD1Q8WVM8 642 aa10.78□□□□□ -0.68
PHC1-208ENST00000540574 CAPS2Q9BXY5 557 aa10.78□□□□□ -0.68
PHC1-208ENST00000540574 LARSQ9P2J5 1176 aaKnown RBP10.78□□□□□ -0.68
PHC1-208ENST00000540574 DNAJC12Q9UKB3 198 aa10.78□□□□□ -0.68
PHC1-208ENST00000540574 ATP8A1Q9Y2Q0 1164 aa10.78□□□□□ -0.68
PHC1-208ENST00000540574 ZNF142P52746 1687 aaPredicted RBP10.78□□□□□ -0.68
PHC1-208ENST00000540574 MYH8P13535 1937 aa10.78□□□□□ -0.68
PHC1-208ENST00000540574 MYH10P35580 1976 aa10.78□□□□□ -0.68
PHC1-208ENST00000540574 E7EVH7 732 aa10.78□□□□□ -0.68
PHC1-208ENST00000540574 FAM86B1E9PN63 330 aa10.78□□□□□ -0.68
PHC1-208ENST00000540574 FAM86B2P0C5J1 330 aa10.78□□□□□ -0.68
PHC1-208ENST00000540574 PSMC2P35998 433 aaKnown RBP10.78□□□□□ -0.68
PHC1-208ENST00000540574 FXR2P51116 673 aaKnown RBP eCLIP10.78□□□□□ -0.68
PHC1-208ENST00000540574 SETQ01105 290 aaPredicted RBP10.78□□□□□ -0.68
PHC1-208ENST00000540574 EN1Q05925 392 aaPredicted RBP10.78□□□□□ -0.68
PHC1-208ENST00000540574 PPP1R7Q15435 360 aa10.78□□□□□ -0.68
PHC1-208ENST00000540574 LMBRD2Q68DH5 695 aaPredicted RBP10.78□□□□□ -0.68
PHC1-208ENST00000540574 CAPN12Q6ZSI9 719 aa10.78□□□□□ -0.68
PHC1-208ENST00000540574 STK32BQ9NY57 414 aa10.78□□□□□ -0.68
PHC1-208ENST00000540574 AKAP11Q9UKA4 1901 aa10.78□□□□□ -0.68
PHC1-208ENST00000540574 hCG_1984214I3L0E3 225 aa10.78□□□□□ -0.68
PHC1-208ENST00000540574 MSH4O15457 936 aa10.78□□□□□ -0.68
PHC1-208ENST00000540574 TNNI1P19237 187 aa10.78□□□□□ -0.68
PHC1-208ENST00000540574 SLCO1A2P46721 670 aa10.78□□□□□ -0.68
PHC1-208ENST00000540574 MYL7Q01449 175 aa10.78□□□□□ -0.68
PHC1-208ENST00000540574 PLCB3Q01970 1234 aa10.78□□□□□ -0.68
PHC1-208ENST00000540574 SNX1Q13596 522 aa10.78□□□□□ -0.68
PHC1-208ENST00000540574 MIIPQ5JXC2 388 aa10.78□□□□□ -0.68
PHC1-208ENST00000540574 NIM1KQ8IY84 436 aa10.78□□□□□ -0.68
PHC1-208ENST00000540574 CCDC105Q8IYK2 499 aa10.78□□□□□ -0.68
PHC1-208ENST00000540574 ZNF713Q8N859 430 aaPredicted RBP10.78□□□□□ -0.68
PHC1-208ENST00000540574 ZNF507Q8TCN5 953 aa10.78□□□□□ -0.68
PHC1-208ENST00000540574 MGARPQ8TDB4 240 aa10.78□□□□□ -0.68
PHC1-208ENST00000540574 CNKSR1Q969H4 720 aa10.78□□□□□ -0.68
PHC1-208ENST00000540574 SAAL1Q96ER3 474 aa10.78□□□□□ -0.68
PHC1-208ENST00000540574 AGBL1Q96MI9 1066 aa10.78□□□□□ -0.68
PHC1-208ENST00000540574 ERGIC2Q96RQ1 377 aa10.78□□□□□ -0.68
PHC1-208ENST00000540574 NUCKS1Q9H1E3 243 aaKnown RBP10.78□□□□□ -0.68
PHC1-208ENST00000540574 TMOD4Q9NZQ9 345 aa10.78□□□□□ -0.68
PHC1-208ENST00000540574 AMACRQ9UHK6 382 aa10.78□□□□□ -0.68
PHC1-208ENST00000540574 FAM184BQ9ULE4 1060 aa10.78□□□□□ -0.68
PHC1-208ENST00000540574 ATF5Q9Y2D1 282 aaPredicted RBP10.78□□□□□ -0.68
PHC1-208ENST00000540574 MRPL11Q9Y3B7 192 aaKnown RBP10.78□□□□□ -0.68
PHC1-208ENST00000540574 GOLGA6L7A0A1B0GV03 622 aa10.77□□□□□ -0.68
PHC1-208ENST00000540574 PSMD14O00487 310 aa10.77□□□□□ -0.68
PHC1-208ENST00000540574 CCDC172P0C7W6 258 aa10.77□□□□□ -0.68
PHC1-208ENST00000540574 NEFHP12036 1026 aa10.77□□□□□ -0.68
PHC1-208ENST00000540574 UCHL3P15374 230 aa10.77□□□□□ -0.68
PHC1-208ENST00000540574 MAP2K1Q02750 393 aaPredicted RBP10.77□□□□□ -0.68
PHC1-208ENST00000540574 EXOC4Q96A65 974 aa10.77□□□□□ -0.68
PHC1-208ENST00000540574 RASSF4Q9H2L5 321 aa10.77□□□□□ -0.68
PHC1-208ENST00000540574 FZD1Q9UP38 647 aa10.77□□□□□ -0.68
PHC1-208ENST00000540574 SLC16A4O15374 487 aa10.77□□□□□ -0.69
PHC1-208ENST00000540574 FGGP02679 453 aa10.77□□□□□ -0.69
PHC1-208ENST00000540574 PLTPP55058 493 aa10.77□□□□□ -0.69
PHC1-208ENST00000540574 DRAP1Q14919 205 aaPredicted RBP10.77□□□□□ -0.69
PHC1-208ENST00000540574 ARHGEF16Q5VV41 709 aa10.77□□□□□ -0.69
PHC1-208ENST00000540574 LXNQ9BS40 222 aa10.77□□□□□ -0.69
PHC1-208ENST00000540574 MED4Q9NPJ6 270 aa10.77□□□□□ -0.69
PHC1-208ENST00000540574 MKRN1Q9UHC7 482 aaKnown RBP10.77□□□□□ -0.69
PHC1-208ENST00000540574 UTP11Q9Y3A2 253 aaKnown RBP10.77□□□□□ -0.69
PHC1-208ENST00000540574 IPO5O00410 1097 aaKnown RBP10.77□□□□□ -0.69
PHC1-208ENST00000540574 ZNF263O14978 683 aa10.77□□□□□ -0.69
PHC1-208ENST00000540574 PPFIA1Q13136 1202 aa10.77□□□□□ -0.69
PHC1-208ENST00000540574 NNTQ13423 1086 aa10.77□□□□□ -0.69
PHC1-208ENST00000540574 DGKZQ13574 1117 aa10.77□□□□□ -0.69
PHC1-208ENST00000540574 TRIP13Q15645 432 aaPredicted RBP10.77□□□□□ -0.69
PHC1-208ENST00000540574 FOXR1Q6PIV2 292 aa10.77□□□□□ -0.69
PHC1-208ENST00000540574 CPLX4Q7Z7G2 160 aa10.77□□□□□ -0.69
PHC1-208ENST00000540574 CCDC26Q8TAB7 109 aa10.77□□□□□ -0.69
PHC1-208ENST00000540574 SCLT1Q96NL6 688 aa10.77□□□□□ -0.69
PHC1-208ENST00000540574 EHD4Q9H223 541 aa10.77□□□□□ -0.69
PHC1-208ENST00000540574 GINS2Q9Y248 185 aa10.77□□□□□ -0.69
PHC1-208ENST00000540574 USP20Q9Y2K6 914 aa10.77□□□□□ -0.69
PHC1-208ENST00000540574 RRP15Q9Y3B9 282 aaKnown RBP10.77□□□□□ -0.69
PHC1-208ENST00000540574 MYH6P13533 1939 aa10.76□□□□□ -0.69
PHC1-208ENST00000540574 EML1O00423 815 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms