RNA–Protein interactions for RNA: ENST00000540550.6

TSFM-207, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 2 BASIC

Gene TSFM, Length 1,935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-207ENST00000540550 HOXC10Q9NYD6 342 aa16.39■□□□□ 0.21
TSFM-207ENST00000540550 WRAP73Q9P2S5 460 aaPredicted RBP16.39■□□□□ 0.21
TSFM-207ENST00000540550 ODF2LQ9ULJ1 636 aa16.39■□□□□ 0.21
TSFM-207ENST00000540550 EPN1Q9Y6I3 576 aaPredicted RBP16.39■□□□□ 0.21
TSFM-207ENST00000540550 PTPRFP10586 1907 aa16.39■□□□□ 0.21
TSFM-207ENST00000540550 TESPA1A2RU30 521 aaPredicted RBP16.39■□□□□ 0.21
TSFM-207ENST00000540550 EIF3DO15371 548 aaKnown RBP eCLIP16.39■□□□□ 0.21
TSFM-207ENST00000540550 NDUFA10O95299 355 aa16.39■□□□□ 0.21
TSFM-207ENST00000540550 RPL13P26373 211 aaKnown RBP16.39■□□□□ 0.21
TSFM-207ENST00000540550 CYLC1P35663 651 aaPredicted RBP16.39■□□□□ 0.21
TSFM-207ENST00000540550 MEA1Q16626 185 aa16.39■□□□□ 0.21
TSFM-207ENST00000540550 NEK11Q8NG66 645 aa16.39■□□□□ 0.21
TSFM-207ENST00000540550 SYT17Q9BSW7 474 aa16.39■□□□□ 0.21
TSFM-207ENST00000540550 POLD4Q9HCU8 107 aa16.39■□□□□ 0.21
TSFM-207ENST00000540550 ZNF214Q9UL59 606 aaPredicted RBP16.39■□□□□ 0.21
TSFM-207ENST00000540550 CSADQ9Y600 493 aa16.39■□□□□ 0.21
TSFM-207ENST00000540550 UBE4BO95155 1302 aa16.39■□□□□ 0.21
TSFM-207ENST00000540550 MYPNQ86TC9 1320 aa16.39■□□□□ 0.21
TSFM-207ENST00000540550 SFI1A8K8P3 1242 aa16.38■□□□□ 0.21
TSFM-207ENST00000540550 ATP2A1O14983 1001 aa16.38■□□□□ 0.21
TSFM-207ENST00000540550 URI1O94763 535 aaPredicted RBP16.38■□□□□ 0.21
TSFM-207ENST00000540550 GUCY2CP25092 1073 aa16.38■□□□□ 0.21
TSFM-207ENST00000540550 JAK3P52333 1124 aa16.38■□□□□ 0.21
TSFM-207ENST00000540550 PLS1Q14651 629 aa16.38■□□□□ 0.21
TSFM-207ENST00000540550 TMEM132BQ14DG7 1078 aa16.38■□□□□ 0.21
TSFM-207ENST00000540550 WDR59Q6PJI9 974 aa16.38■□□□□ 0.21
TSFM-207ENST00000540550 NLRX1Q86UT6 975 aa16.38■□□□□ 0.21
TSFM-207ENST00000540550 TRIM59Q8IWR1 403 aa16.38■□□□□ 0.21
TSFM-207ENST00000540550 ERO1AQ96HE7 468 aa16.38■□□□□ 0.21
TSFM-207ENST00000540550 CCDC43Q96MW1 224 aaKnown RBP16.38■□□□□ 0.21
TSFM-207ENST00000540550 ACAD9Q9H845 621 aa16.38■□□□□ 0.21
TSFM-207ENST00000540550 SNCAIPQ9Y6H5 919 aa16.38■□□□□ 0.21
TSFM-207ENST00000540550 KIAA1217Q5T5P2 1943 aa16.38■□□□□ 0.21
TSFM-207ENST00000540550 PPP1R12BO60237 982 aaPredicted RBP16.37■□□□□ 0.21
TSFM-207ENST00000540550 IPO7O95373 1038 aaKnown RBP16.37■□□□□ 0.21
TSFM-207ENST00000540550 QARSP47897 775 aaKnown RBP16.37■□□□□ 0.21
TSFM-207ENST00000540550 KRT76Q01546 638 aa16.37■□□□□ 0.21
TSFM-207ENST00000540550 VGLL4Q14135 290 aa16.37■□□□□ 0.21
TSFM-207ENST00000540550 SH3D19Q5HYK7 790 aa16.37■□□□□ 0.21
TSFM-207ENST00000540550 WDR24Q96S15 920 aa16.37■□□□□ 0.21
TSFM-207ENST00000540550 ZNF215Q9UL58 517 aaPredicted RBP16.37■□□□□ 0.21
TSFM-207ENST00000540550 LOC285556D6RIA3 1793 aa16.37■□□□□ 0.21
TSFM-207ENST00000540550 PAPPA2Q9BXP8 1791 aa16.37■□□□□ 0.21
TSFM-207ENST00000540550 SPDYE16A6NNV3 312 aaPredicted RBP16.37■□□□□ 0.21
TSFM-207ENST00000540550 NR3C1P04150 777 aa16.37■□□□□ 0.21
TSFM-207ENST00000540550 NMT1P30419 496 aaKnown RBP16.37■□□□□ 0.21
TSFM-207ENST00000540550 SFNP31947 248 aa16.37■□□□□ 0.21
TSFM-207ENST00000540550 HOXD13P35453 343 aa16.37■□□□□ 0.21
TSFM-207ENST00000540550 ZNF131P52739 623 aa16.37■□□□□ 0.21
TSFM-207ENST00000540550 KRT83P78385 493 aa16.37■□□□□ 0.21
TSFM-207ENST00000540550 CDK17Q00537 523 aa16.37■□□□□ 0.21
TSFM-207ENST00000540550 PADI6Q6TGC4 694 aa16.37■□□□□ 0.21
TSFM-207ENST00000540550 FRMD5Q7Z6J6 570 aa16.37■□□□□ 0.21
TSFM-207ENST00000540550 FAM178BQ8IXR5 827 aa16.37■□□□□ 0.21
TSFM-207ENST00000540550 CCDC170Q8IYT3 715 aa16.37■□□□□ 0.21
TSFM-207ENST00000540550 NSUN6Q8TEA1 469 aaKnown RBP16.37■□□□□ 0.21
TSFM-207ENST00000540550 SMCR8Q8TEV9 937 aaPredicted RBP16.37■□□□□ 0.21
TSFM-207ENST00000540550 GPRASP2Q96D09 838 aa16.37■□□□□ 0.21
TSFM-207ENST00000540550 PURBQ96QR8 312 aaKnown RBP16.37■□□□□ 0.21
TSFM-207ENST00000540550 EDEM3Q9BZQ6 932 aa16.37■□□□□ 0.21
TSFM-207ENST00000540550 ARMCX3Q9UH62 379 aaPredicted RBP16.37■□□□□ 0.21
TSFM-207ENST00000540550 DBR1Q9UK59 544 aaKnown RBP16.37■□□□□ 0.21
TSFM-207ENST00000540550 ASTN1O14525 1302 aa16.36■□□□□ 0.21
TSFM-207ENST00000540550 WDR64B1ANS9 1081 aa16.36■□□□□ 0.21
TSFM-207ENST00000540550 ADM5C9JUS6 153 aa16.36■□□□□ 0.21
TSFM-207ENST00000540550 SLC16A3O15427 465 aaKnown RBP16.36■□□□□ 0.21
TSFM-207ENST00000540550 NR3C2P08235 984 aa16.36■□□□□ 0.21
TSFM-207ENST00000540550 EPB41P11171 864 aaKnown RBP16.36■□□□□ 0.21
TSFM-207ENST00000540550 PPP2R3AQ06190 1150 aa16.36■□□□□ 0.21
TSFM-207ENST00000540550 ODR4Q5SWX8 454 aa16.36■□□□□ 0.21
TSFM-207ENST00000540550 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.36■□□□□ 0.21
TSFM-207ENST00000540550 CACNA2D4Q7Z3S7 1137 aa16.36■□□□□ 0.21
TSFM-207ENST00000540550 MAF1Q9H063 256 aa16.36■□□□□ 0.21
TSFM-207ENST00000540550 HIP1RO75146 1068 aa16.35■□□□□ 0.21
TSFM-207ENST00000540550 LYPLA2O95372 231 aa16.35■□□□□ 0.21
TSFM-207ENST00000540550 YBX3P16989 372 aaKnown RBP eCLIP16.35■□□□□ 0.21
TSFM-207ENST00000540550 IREB2P48200 963 aaKnown RBP16.35■□□□□ 0.21
TSFM-207ENST00000540550 VSIG10LQ86VR7 867 aa16.35■□□□□ 0.21
TSFM-207ENST00000540550 LSM14BQ9BX40 385 aaKnown RBP16.35■□□□□ 0.21
TSFM-207ENST00000540550 NHEJ1Q9H9Q4 299 aaPredicted RBP16.35■□□□□ 0.21
TSFM-207ENST00000540550 METTL14Q9HCE5 456 aaKnown RBP16.35■□□□□ 0.21
TSFM-207ENST00000540550 WDR81Q562E7 1941 aa16.35■□□□□ 0.21
TSFM-207ENST00000540550 A0A0U1RQJ8 604 aa16.35■□□□□ 0.21
TSFM-207ENST00000540550 EPHB6O15197 1021 aa16.35■□□□□ 0.21
TSFM-207ENST00000540550 NCBP1Q09161 790 aaKnown RBP16.35■□□□□ 0.21
TSFM-207ENST00000540550 ZNF569Q5MCW4 686 aa16.35■□□□□ 0.21
TSFM-207ENST00000540550 RRAGAQ7L523 313 aa16.35■□□□□ 0.21
TSFM-207ENST00000540550 MTERF4Q7Z6M4 381 aaKnown RBP16.35■□□□□ 0.21
TSFM-207ENST00000540550 KIAA1328Q86T90 577 aa16.35■□□□□ 0.21
TSFM-207ENST00000540550 CCDC155Q8N6L0 562 aa16.35■□□□□ 0.21
TSFM-207ENST00000540550 ATRIPQ8WXE1 791 aa16.35■□□□□ 0.21
TSFM-207ENST00000540550 BCAS3Q9H6U6 928 aa16.35■□□□□ 0.21
TSFM-207ENST00000540550 CYP39A1Q9NYL5 469 aa16.35■□□□□ 0.21
TSFM-207ENST00000540550 CEP72Q9P209 647 aa16.35■□□□□ 0.21
TSFM-207ENST00000540550 PCDHB13Q9Y5F0 798 aa16.35■□□□□ 0.21
TSFM-207ENST00000540550 FANCGO15287 622 aa16.34■□□□□ 0.21
TSFM-207ENST00000540550 MAFGO15525 162 aa16.34■□□□□ 0.21
TSFM-207ENST00000540550 HNRNPH3P31942 346 aaKnown RBP16.34■□□□□ 0.21
TSFM-207ENST00000540550 PSMC5P62195 406 aa16.34■□□□□ 0.21
TSFM-207ENST00000540550 C9orf131Q5VYM1 1079 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 163.2 ms