RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 CASQ1P31415 396 aa11.22□□□□□ -0.61
SPARC-209ENST00000539687 HNRNPH3P31942 346 aaKnown RBP11.22□□□□□ -0.61
SPARC-209ENST00000539687 QARSP47897 775 aaKnown RBP11.22□□□□□ -0.61
SPARC-209ENST00000539687 ZNF131P52739 623 aa11.22□□□□□ -0.61
SPARC-209ENST00000539687 ADAM9Q13443 819 aa11.22□□□□□ -0.61
SPARC-209ENST00000539687 PGM5Q15124 567 aa11.22□□□□□ -0.61
SPARC-209ENST00000539687 ARHGAP29Q52LW3 1261 aa11.22□□□□□ -0.61
SPARC-209ENST00000539687 MIIPQ5JXC2 388 aa11.22□□□□□ -0.61
SPARC-209ENST00000539687 COL13A1Q5TAT6 717 aaPredicted RBP11.22□□□□□ -0.61
SPARC-209ENST00000539687 SNRNP48Q6IEG0 339 aaKnown RBP11.22□□□□□ -0.61
SPARC-209ENST00000539687 SYT10Q6XYQ8 523 aa11.22□□□□□ -0.61
SPARC-209ENST00000539687 C1orf186Q6ZWK4 172 aa11.22□□□□□ -0.61
SPARC-209ENST00000539687 HS2ST1Q7LGA3 356 aa11.22□□□□□ -0.61
SPARC-209ENST00000539687 SFR1Q86XK3 245 aa11.22□□□□□ -0.61
SPARC-209ENST00000539687 SMAP1Q8IYB5 467 aaPredicted RBP11.22□□□□□ -0.61
SPARC-209ENST00000539687 DNAJC5GQ8N7S2 189 aa11.22□□□□□ -0.61
SPARC-209ENST00000539687 NEK11Q8NG66 645 aa11.22□□□□□ -0.61
SPARC-209ENST00000539687 TRPM4Q8TD43 1214 aa11.22□□□□□ -0.61
SPARC-209ENST00000539687 ZC3H15Q8WU90 426 aaKnown RBP11.22□□□□□ -0.61
SPARC-209ENST00000539687 PHIPQ8WWQ0 1821 aa11.22□□□□□ -0.61
SPARC-209ENST00000539687 ATG4CQ96DT6 458 aa11.22□□□□□ -0.61
SPARC-209ENST00000539687 RMDN3Q96TC7 470 aa11.22□□□□□ -0.61
SPARC-209ENST00000539687 MPHOSPH6Q99547 160 aaKnown RBP11.22□□□□□ -0.61
SPARC-209ENST00000539687 SENP7Q9BQF6 1050 aa11.22□□□□□ -0.61
SPARC-209ENST00000539687 PDCD2LQ9BRP1 358 aa11.22□□□□□ -0.61
SPARC-209ENST00000539687 LXNQ9BS40 222 aa11.22□□□□□ -0.61
SPARC-209ENST00000539687 TSGA10Q9BZW7 698 aa11.22□□□□□ -0.61
SPARC-209ENST00000539687 TTYH3Q9C0H2 523 aa11.22□□□□□ -0.61
SPARC-209ENST00000539687 KCTD10Q9H3F6 313 aa11.22□□□□□ -0.61
SPARC-209ENST00000539687 L2HGDHQ9H9P8 463 aa11.22□□□□□ -0.61
SPARC-209ENST00000539687 LUC7LQ9NQ29 371 aaKnown RBP11.22□□□□□ -0.61
SPARC-209ENST00000539687 LARSQ9P2J5 1176 aaKnown RBP11.22□□□□□ -0.61
SPARC-209ENST00000539687 DNAI1Q9UI46 699 aa11.22□□□□□ -0.61
SPARC-209ENST00000539687 AFG3L2Q9Y4W6 797 aa11.22□□□□□ -0.61
SPARC-209ENST00000539687 PCDHB13Q9Y5F0 798 aa11.22□□□□□ -0.61
SPARC-209ENST00000539687 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.22□□□□□ -0.61
SPARC-209ENST00000539687 PFASO15067 1338 aa11.21□□□□□ -0.61
SPARC-209ENST00000539687 ASTN2O75129 1339 aaPredicted RBP11.21□□□□□ -0.61
SPARC-209ENST00000539687 SOWAHDA6NJG2 315 aa11.21□□□□□ -0.61
SPARC-209ENST00000539687 GCNT3O95395 438 aa11.21□□□□□ -0.61
SPARC-209ENST00000539687 SCP2P22307 547 aa11.21□□□□□ -0.61
SPARC-209ENST00000539687 HMGCS2P54868 508 aa11.21□□□□□ -0.61
SPARC-209ENST00000539687 GNG11P61952 73 aa11.21□□□□□ -0.61
SPARC-209ENST00000539687 PSMC5P62195 406 aa11.21□□□□□ -0.61
SPARC-209ENST00000539687 CTTNQ14247 550 aaKnown RBP11.21□□□□□ -0.61
SPARC-209ENST00000539687 HSP90AA2PQ14568 343 aaPredicted RBP11.21□□□□□ -0.61
SPARC-209ENST00000539687 ZNF746Q6NUN9 644 aaPredicted RBP11.21□□□□□ -0.61
SPARC-209ENST00000539687 DPY19L2Q6NUT2 758 aa11.21□□□□□ -0.61
SPARC-209ENST00000539687 NSMFQ6X4W1 530 aa11.21□□□□□ -0.61
SPARC-209ENST00000539687 USP50Q70EL3 339 aaPredicted RBP11.21□□□□□ -0.61
SPARC-209ENST00000539687 FAM178BQ8IXR5 827 aa11.21□□□□□ -0.61
SPARC-209ENST00000539687 C4orf19Q8IY42 314 aa11.21□□□□□ -0.61
SPARC-209ENST00000539687 REPS2Q8NFH8 660 aa11.21□□□□□ -0.61
SPARC-209ENST00000539687 SYN2Q92777 582 aaPredicted RBP11.21□□□□□ -0.61
SPARC-209ENST00000539687 HPS3Q969F9 1004 aa11.21□□□□□ -0.61
SPARC-209ENST00000539687 ZKSCAN4Q969J2 545 aaPredicted RBP11.21□□□□□ -0.61
SPARC-209ENST00000539687 DRC1Q96MC2 740 aa11.21□□□□□ -0.61
SPARC-209ENST00000539687 HAUS4Q9H6D7 363 aa11.21□□□□□ -0.61
SPARC-209ENST00000539687 TMEM206Q9H813 350 aa11.21□□□□□ -0.61
SPARC-209ENST00000539687 ANKEF1Q9NU02 776 aa11.21□□□□□ -0.61
SPARC-209ENST00000539687 RGL1Q9NZL6 768 aa11.21□□□□□ -0.61
SPARC-209ENST00000539687 ARMCX3Q9UH62 379 aaPredicted RBP11.21□□□□□ -0.61
SPARC-209ENST00000539687 EPN1Q9Y6I3 576 aaPredicted RBP11.21□□□□□ -0.61
SPARC-209ENST00000539687 NFASCO94856 1347 aa11.2□□□□□ -0.62
SPARC-209ENST00000539687 EIF3CLB5ME19 914 aaKnown RBP11.2□□□□□ -0.62
SPARC-209ENST00000539687 NDUFA10O95299 355 aa11.2□□□□□ -0.62
SPARC-209ENST00000539687 XRCC5P13010 732 aaKnown RBP11.2□□□□□ -0.62
SPARC-209ENST00000539687 TAL1P17542 331 aaPredicted RBP11.2□□□□□ -0.62
SPARC-209ENST00000539687 NR2F2P24468 414 aa11.2□□□□□ -0.62
SPARC-209ENST00000539687 PSMC6P62333 389 aa11.2□□□□□ -0.62
SPARC-209ENST00000539687 UBXN2AP68543 259 aa11.2□□□□□ -0.62
SPARC-209ENST00000539687 PPATQ06203 517 aa11.2□□□□□ -0.62
SPARC-209ENST00000539687 GOLGA8FQ08AF8 430 aa11.2□□□□□ -0.62
SPARC-209ENST00000539687 GOLGA8DPQ0D2H9 430 aa11.2□□□□□ -0.62
SPARC-209ENST00000539687 LRRC41Q15345 812 aa11.2□□□□□ -0.62
SPARC-209ENST00000539687 SPA17Q15506 151 aa11.2□□□□□ -0.62
SPARC-209ENST00000539687 MUM1L1Q5H9M0 696 aa11.2□□□□□ -0.62
SPARC-209ENST00000539687 RAD9BQ6WBX8 426 aa11.2□□□□□ -0.62
SPARC-209ENST00000539687 TOGARAM2Q6ZUX3 1019 aa11.2□□□□□ -0.62
SPARC-209ENST00000539687 OTUD6AQ7L8S5 288 aa11.2□□□□□ -0.62
SPARC-209ENST00000539687 CACNA2D4Q7Z3S7 1137 aa11.2□□□□□ -0.62
SPARC-209ENST00000539687 VSIG10LQ86VR7 867 aa11.2□□□□□ -0.62
SPARC-209ENST00000539687 TRIM59Q8IWR1 403 aa11.2□□□□□ -0.62
SPARC-209ENST00000539687 MYCT1Q8N699 235 aa11.2□□□□□ -0.62
SPARC-209ENST00000539687 PROCA1Q8NCQ7 364 aaPredicted RBP11.2□□□□□ -0.62
SPARC-209ENST00000539687 DNERQ8NFT8 737 aa11.2□□□□□ -0.62
SPARC-209ENST00000539687 TMEM174Q8WUU8 243 aa11.2□□□□□ -0.62
SPARC-209ENST00000539687 ATP6V0A1Q93050 837 aa11.2□□□□□ -0.62
SPARC-209ENST00000539687 HVCN1Q96D96 273 aa11.2□□□□□ -0.62
SPARC-209ENST00000539687 EIF3CQ99613 913 aaKnown RBP11.2□□□□□ -0.62
SPARC-209ENST00000539687 RUSC1Q9BVN2 902 aa11.2□□□□□ -0.62
SPARC-209ENST00000539687 HOMER2Q9NSB8 354 aa11.2□□□□□ -0.62
SPARC-209ENST00000539687 RNF181Q9P0P0 153 aa11.2□□□□□ -0.62
SPARC-209ENST00000539687 CEP72Q9P209 647 aa11.2□□□□□ -0.62
SPARC-209ENST00000539687 COL20A1Q9P218 1284 aa11.2□□□□□ -0.62
SPARC-209ENST00000539687 ZNF214Q9UL59 606 aaPredicted RBP11.2□□□□□ -0.62
SPARC-209ENST00000539687 SIK3Q9Y2K2 1263 aa11.2□□□□□ -0.62
SPARC-209ENST00000539687 SAMM50Q9Y512 469 aa11.2□□□□□ -0.62
SPARC-209ENST00000539687 NPHP3-ACAD11A0A0J9YXS1 232 aa11.19□□□□□ -0.62
SPARC-209ENST00000539687 GTPBP10A4D1E9 387 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms