RNA–Protein interactions for RNA: ENST00000539429.1

GTF2H3-207, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 2

Gene GTF2H3, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-207ENST00000539429 RTP1P59025 263 aa10.85□□□□□ -0.67
GTF2H3-207ENST00000539429 CHMP4BP1P59074 171 aa10.85□□□□□ -0.67
GTF2H3-207ENST00000539429 ANKRD1Q15327 319 aa10.85□□□□□ -0.67
GTF2H3-207ENST00000539429 FSCN1Q16658 493 aaKnown RBP10.85□□□□□ -0.67
GTF2H3-207ENST00000539429 LRRC26Q2I0M4 334 aa10.85□□□□□ -0.67
GTF2H3-207ENST00000539429 DUSP28Q4G0W2 176 aa10.85□□□□□ -0.67
GTF2H3-207ENST00000539429 TRIM46Q7Z4K8 759 aa10.85□□□□□ -0.67
GTF2H3-207ENST00000539429 TRIM22Q8IYM9 498 aa10.85□□□□□ -0.67
GTF2H3-207ENST00000539429 ZNF713Q8N859 430 aaPredicted RBP10.85□□□□□ -0.67
GTF2H3-207ENST00000539429 CCDC12Q8WUD4 166 aaPredicted RBP10.85□□□□□ -0.67
GTF2H3-207ENST00000539429 PHKBQ93100 1093 aa10.85□□□□□ -0.67
GTF2H3-207ENST00000539429 SLC26A6Q9BXS9 759 aa10.85□□□□□ -0.67
GTF2H3-207ENST00000539429 NCOA5Q9HCD5 579 aaKnown RBP10.85□□□□□ -0.67
GTF2H3-207ENST00000539429 POLMQ9NP87 494 aaPredicted RBP10.85□□□□□ -0.67
GTF2H3-207ENST00000539429 PRDM5Q9NQX1 630 aaPredicted RBP10.85□□□□□ -0.67
GTF2H3-207ENST00000539429 ZMYND8Q9ULU4 1186 aaPredicted RBP10.85□□□□□ -0.67
GTF2H3-207ENST00000539429 PHF24Q9UPV7 400 aa10.85□□□□□ -0.67
GTF2H3-207ENST00000539429 MYADML2A6NDP7 307 aa10.84□□□□□ -0.67
GTF2H3-207ENST00000539429 SMCO2A6NFE2 343 aa10.84□□□□□ -0.67
GTF2H3-207ENST00000539429 CDK2AP1O14519 115 aa10.84□□□□□ -0.67
GTF2H3-207ENST00000539429 ST8SIA5O15466 376 aa10.84□□□□□ -0.67
GTF2H3-207ENST00000539429 PRMT3O60678 531 aa10.84□□□□□ -0.67
GTF2H3-207ENST00000539429 LGR5O75473 907 aa10.84□□□□□ -0.67
GTF2H3-207ENST00000539429 SYN1P17600 705 aa10.84□□□□□ -0.67
GTF2H3-207ENST00000539429 EDNRBP24530 442 aa10.84□□□□□ -0.67
GTF2H3-207ENST00000539429 PDIA3P30101 505 aaKnown RBP10.84□□□□□ -0.67
GTF2H3-207ENST00000539429 RNF144AP50876 292 aaPredicted RBP10.84□□□□□ -0.67
GTF2H3-207ENST00000539429 ADCY7P51828 1080 aa10.84□□□□□ -0.67
GTF2H3-207ENST00000539429 NEK4P51957 841 aa10.84□□□□□ -0.67
GTF2H3-207ENST00000539429 SSRP1Q08945 709 aaKnown RBP10.84□□□□□ -0.67
GTF2H3-207ENST00000539429 TOB2Q14106 344 aaPredicted RBP10.84□□□□□ -0.67
GTF2H3-207ENST00000539429 PGM5Q15124 567 aa10.84□□□□□ -0.67
GTF2H3-207ENST00000539429 UBE2SQ16763 222 aa10.84□□□□□ -0.67
GTF2H3-207ENST00000539429 GNPTABQ3T906 1256 aa10.84□□□□□ -0.67
GTF2H3-207ENST00000539429 WWC2Q6AWC2 1192 aa10.84□□□□□ -0.67
GTF2H3-207ENST00000539429 KCNV1Q6PIU1 500 aa10.84□□□□□ -0.67
GTF2H3-207ENST00000539429 FBXL16Q8N461 479 aa10.84□□□□□ -0.67
GTF2H3-207ENST00000539429 KLHDC9Q8NEP7 349 aa10.84□□□□□ -0.67
GTF2H3-207ENST00000539429 ZNF274Q96GC6 653 aaPredicted RBP10.84□□□□□ -0.67
GTF2H3-207ENST00000539429 LBHD1Q9BQE6 289 aaPredicted RBP10.84□□□□□ -0.67
GTF2H3-207ENST00000539429 PDCD2LQ9BRP1 358 aa10.84□□□□□ -0.67
GTF2H3-207ENST00000539429 AGXT2Q9BYV1 514 aa10.84□□□□□ -0.67
GTF2H3-207ENST00000539429 UPF3AQ9H1J1 476 aaKnown RBP10.84□□□□□ -0.67
GTF2H3-207ENST00000539429 SLKQ9H2G2 1235 aaPredicted RBP10.84□□□□□ -0.67
GTF2H3-207ENST00000539429 SCHIP1Q9P0W5 487 aaPredicted RBP10.84□□□□□ -0.67
GTF2H3-207ENST00000539429 GNEQ9Y223 722 aaKnown RBP10.84□□□□□ -0.67
GTF2H3-207ENST00000539429 Q9Y3F1 56 aa10.84□□□□□ -0.67
GTF2H3-207ENST00000539429 SORBS3O60504 671 aa10.83□□□□□ -0.68
GTF2H3-207ENST00000539429 PQBP1O60828 265 aaKnown RBP10.83□□□□□ -0.68
GTF2H3-207ENST00000539429 BRD1O95696 1058 aa10.83□□□□□ -0.68
GTF2H3-207ENST00000539429 GH1P01241 217 aa10.83□□□□□ -0.68
GTF2H3-207ENST00000539429 SCG2P13521 617 aa10.83□□□□□ -0.68
GTF2H3-207ENST00000539429 CST5P28325 142 aaPredicted RBP10.83□□□□□ -0.68
GTF2H3-207ENST00000539429 WEE1P30291 646 aa10.83□□□□□ -0.68
GTF2H3-207ENST00000539429 CTSOP43234 321 aaPredicted RBP10.83□□□□□ -0.68
GTF2H3-207ENST00000539429 FOXK2Q01167 660 aa10.83□□□□□ -0.68
GTF2H3-207ENST00000539429 GHRHRQ02643 423 aa10.83□□□□□ -0.68
GTF2H3-207ENST00000539429 PFKFB3Q16875 520 aaPredicted RBP10.83□□□□□ -0.68
GTF2H3-207ENST00000539429 LY6KQ17RY6 165 aa10.83□□□□□ -0.68
GTF2H3-207ENST00000539429 TRIM60Q495X7 471 aa10.83□□□□□ -0.68
GTF2H3-207ENST00000539429 TMEM63BQ5T3F8 832 aa10.83□□□□□ -0.68
GTF2H3-207ENST00000539429 CXCL17Q6UXB2 119 aa10.83□□□□□ -0.68
GTF2H3-207ENST00000539429 VSIG10LQ86VR7 867 aa10.83□□□□□ -0.68
GTF2H3-207ENST00000539429 DHX37Q8IY37 1157 aaKnown RBP10.83□□□□□ -0.68
GTF2H3-207ENST00000539429 COPS5Q92905 334 aa10.83□□□□□ -0.68
GTF2H3-207ENST00000539429 PRIMPOLQ96LW4 560 aa10.83□□□□□ -0.68
GTF2H3-207ENST00000539429 GLT8D2Q9H1C3 349 aa10.83□□□□□ -0.68
GTF2H3-207ENST00000539429 TSPAN10Q9H1Z9 355 aaPredicted RBP10.83□□□□□ -0.68
GTF2H3-207ENST00000539429 C6orf50Q9HD87 102 aa10.83□□□□□ -0.68
GTF2H3-207ENST00000539429 RTEL1Q9NZ71 1219 aa10.83□□□□□ -0.68
GTF2H3-207ENST00000539429 KAT6AQ92794 2004 aa10.82□□□□□ -0.68
GTF2H3-207ENST00000539429 A0A0U1RQG5 324 aaPredicted RBP10.82□□□□□ -0.68
GTF2H3-207ENST00000539429 RBM47A0AV96 593 aaKnown RBP10.82□□□□□ -0.68
GTF2H3-207ENST00000539429 DCDC2CA8MYV0 355 aa10.82□□□□□ -0.68
GTF2H3-207ENST00000539429 STXBP3O00186 592 aa10.82□□□□□ -0.68
GTF2H3-207ENST00000539429 MEIS2O14770 477 aa10.82□□□□□ -0.68
GTF2H3-207ENST00000539429 TLR3O15455 904 aaKnown RBP10.82□□□□□ -0.68
GTF2H3-207ENST00000539429 PRPF3O43395 683 aaKnown RBP10.82□□□□□ -0.68
GTF2H3-207ENST00000539429 STAM2O75886 525 aa10.82□□□□□ -0.68
GTF2H3-207ENST00000539429 CABYRO75952 493 aa10.82□□□□□ -0.68
GTF2H3-207ENST00000539429 CDKL5O76039 1030 aa10.82□□□□□ -0.68
GTF2H3-207ENST00000539429 PTGS1P23219 599 aa10.82□□□□□ -0.68
GTF2H3-207ENST00000539429 ZNF76P36508 570 aa10.82□□□□□ -0.68
GTF2H3-207ENST00000539429 AK2P54819 239 aa10.82□□□□□ -0.68
GTF2H3-207ENST00000539429 OCLNQ16625 522 aa10.82□□□□□ -0.68
GTF2H3-207ENST00000539429 FAM47CQ5HY64 1035 aa10.82□□□□□ -0.68
GTF2H3-207ENST00000539429 NLRX1Q86UT6 975 aa10.82□□□□□ -0.68
GTF2H3-207ENST00000539429 IL31RAQ8NI17 732 aa10.82□□□□□ -0.68
GTF2H3-207ENST00000539429 RNF26Q9BY78 433 aaPredicted RBP10.82□□□□□ -0.68
GTF2H3-207ENST00000539429 GRIP2Q9C0E4 1043 aa10.82□□□□□ -0.68
GTF2H3-207ENST00000539429 MLXIPQ9HAP2 919 aa10.82□□□□□ -0.68
GTF2H3-207ENST00000539429 BARHL2Q9NY43 387 aa10.82□□□□□ -0.68
GTF2H3-207ENST00000539429 PCDHA6Q9UN73 950 aa10.82□□□□□ -0.68
GTF2H3-207ENST00000539429 PCDHA8Q9Y5H6 950 aa10.82□□□□□ -0.68
GTF2H3-207ENST00000539429 ELP1O95163 1332 aa10.82□□□□□ -0.68
GTF2H3-207ENST00000539429 MROH7Q68CQ1 1323 aa10.82□□□□□ -0.68
GTF2H3-207ENST00000539429 NOP56O00567 594 aaKnown RBP10.81□□□□□ -0.68
GTF2H3-207ENST00000539429 KPNA6O60684 536 aa10.81□□□□□ -0.68
GTF2H3-207ENST00000539429 ARIH2O95376 493 aa10.81□□□□□ -0.68
GTF2H3-207ENST00000539429 FOSP01100 380 aaPredicted RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms